Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip05g00057 ATGGCTACAATTTTCTGTTATCCATCACCAACCTTTCTTTACCTTTTGCTCTCAACCTTCCTTGCATTAAACCTCTCAACTTATTCGATTCAATTCCAAATATCTAGGTTTACTACTGGCGATCCAAACATAGTTTACAGAGGACAAGCCATACCTCGTGTTGGAACAATTGAATTGAACAATAACATTGATTACTTATTCCAAGTTGGATCAGCCATATACTCCAAAGATGTTCCACTTTGGGAATCAAGCTCAGGAAAACAAGCTGATTTCAAAACACACTTCACCTTTGTTATTGACACTCAAGGGAAATCTCAGTATGGTGCCGGGCTTGCATTTTTCCTTGCACCTTCTGGATTCCAAATACCACCAAACTCTGCCGGCGGCTTCCTAGGCCTTTACAACACATCCACTGCCGACTCGTCGCGCAATCAGATTGTTCATGTTGAGTTTGATTCCTTCCCTAATCCGGAGTGGGATCCCAAAATGGAGCATGTGGGAATCAATGTTAATTCAATTTCTTCAGCAAACTACACTGCTTGGAATGCTAGCAAGCATAGTAATGACATTGCTGATGCATGGATCACATACAATTCAACAAACAAGATTCTAAGTGTGTCATGGAAATACCAAACAACCTCTACCTCTCAAGAGAATACTACTCTTTCTCATCAAATTGATTTGATCAAGGTCTTGCCTCAATCGGTTACAATTGGATTTTCCGCGGCTACAGGTTCTTACACAGAACGACATGTTATTCAATCTTGGGAGTTCAGTTCTAGTTTGGACGCAGAGCCTGGTAAAGGAAAGAATTCGAAGAAGACATGGAAGGTGGTGGTTGGATCAGTTGTTGCAGGAGCTGTTTTGATTGTGGCAGTTATTTCAACATATGTAATATTTAGAAGATGGAAGAAGAAAAAGAAAAATGATGCTCTAAGAGAGAGGATGAGCTCTATTGATGACTTGGAAAGAGGAGCTGGACCAAGAAGATTCTCTTATGAGGAGGTTGTTGTCGCCACCAATAACTTCTCCCCAAACAGGAAGTTAGGCCAAGGTGGATTTGGAGCAGTGTATAGAGGCTACTTTGCTGATCTAGATTTGGTGGTTGCTGTTAAGAAGATATCAAGTGGATCAAGACAAGGGAAAAGAGAGTATGTAACTGAAGTCAAAGTCATTAGCAGGTTAAGGCATAGGAATCTTGTGCAACTCATAGGTTGGTGCCATGATCGAGGTGAGTTCCTTCTTGTTTATGAGTATATGCCAAATGGTAGCCTTGATTCCCATTTGTTTGGGAATAGGACTCCATTATCGTGGAGCTTGAGGCACAAGATAGCTCTTGGATTGGCCTCTGCTATTCTCTATCTTCATGAAGAGTGGGAACAATGTGTATTGCATAGAGATATCAAACCAAGCAATGTGATGTTGGATTCTAGTTTCAATGTCAAGCTTGGTGATTTCGGTTTGGCTAAGCTCATAGATCATGAATTAGGGTCTCAAACATCGGCTTTAGCCGGAACTATTGGCTATATGGCTCCAGAATATATAAGCAGTCGCAGAGCAAGTAAGGAGTCAGATGTGTATAGTTTTGGATTGGTAGCTCTAGAGATTGCCACCGGGAAAAAGGTGTTTGATCTTATAGAGGATGAAGATAGTCAAAAGGGGTTAGCAGAGTGGGTTTGGGATCATTACGGAAGAGAAGAGCTTCATATGGTTGTGGATGGGAGACTAGAAAAGGATTTTGATGAGAAACAAGCCATGTATTTGATGATTGTTGGTTTATGGTGTTGTCATCCTGATAAGAATGTGAGACCATCAATAAGACAAGCAATTCAAGTGCTGAATTCAGAAGGTGCACTGCCACAACTTCCAACAAAGATGCCTGTTGCTATATACCATATTCCCACACCTTCTGTCAGCTCTGATGGTGCTTCCGTTAGTGTTAGCCTCCAATCAGGTCGGTGA 1962 0.4144 MATIFCYPSPTFLYLLLSTFLALNLSTYSIQFQISRFTTGDPNIVYRGQAIPRVGTIELNNNIDYLFQVGSAIYSKDVPLWESSSGKQADFKTHFTFVIDTQGKSQYGAGLAFFLAPSGFQIPPNSAGGFLGLYNTSTADSSRNQIVHVEFDSFPNPEWDPKMEHVGINVNSISSANYTAWNASKHSNDIADAWITYNSTNKILSVSWKYQTTSTSQENTTLSHQIDLIKVLPQSVTIGFSAATGSYTERHVIQSWEFSSSLDAEPGKGKNSKKTWKVVVGSVVAGAVLIVAVISTYVIFRRWKKKKKNDALRERMSSIDDLERGAGPRRFSYEEVVVATNNFSPNRKLGQGGFGAVYRGYFADLDLVVAVKKISSGSRQGKREYVTEVKVISRLRHRNLVQLIGWCHDRGEFLLVYEYMPNGSLDSHLFGNRTPLSWSLRHKIALGLASAILYLHEEWEQCVLHRDIKPSNVMLDSSFNVKLGDFGLAKLIDHELGSQTSALAGTIGYMAPEYISSRRASKESDVYSFGLVALEIATGKKVFDLIEDEDSQKGLAEWVWDHYGREELHMVVDGRLEKDFDEKQAMYLMIVGLWCCHPDKNVRPSIRQAIQVLNSEGALPQLPTKMPVAIYHIPTPSVSSDGASVSVSLQSGR 653
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip05g00057 653 Pfam Protein kinase domain 345 611 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip05g00057 653 PANTHER - 25 648 - -
Aip05g00057 653 SMART serkin_6 343 618 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip05g00057 653 Pfam Legume lectin domain 30 268 IPR001220 GO:0030246
Aip05g00057 653 PANTHER PUTATIVE-RELATED 25 648 - -
Aip05g00057 653 Gene3D Phosphorylase Kinase; domain 1 328 419 - -
Aip05g00057 653 ProSitePatterns Serine/Threonine protein kinases active-site signature. 463 475 IPR008271 GO:0004672|GO:0006468
Aip05g00057 653 CDD lectin_legume_LecRK_Arcelin_ConA 30 262 IPR001220 GO:0030246
Aip05g00057 653 SUPERFAMILY Protein kinase-like (PK-like) 327 635 IPR011009 -
Aip05g00057 653 SUPERFAMILY Concanavalin A-like lectins/glucanases 29 264 IPR013320 -
Aip05g00057 653 ProSiteProfiles Protein kinase domain profile. 343 600 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip05g00057 653 Gene3D - 28 286 - -
Aip05g00057 653 ProSitePatterns Protein kinases ATP-binding region signature. 349 373 IPR017441 GO:0005524
Aip05g00057 653 CDD STKc_IRAK 349 614 - -
Aip05g00057 653 Gene3D Transferase(Phosphotransferase) domain 1 420 635 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip05g00057 Aip-Chr5 637753 639714 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip05g00057 15 632 Receptor kinase-like Gene Family AT5G10530 57.987 0.0 719
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Aip05g00057 Pkinase 1.1e-51 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip05g00057 - - jre:109014893 830.091