Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip05g00050 ATGGCAGCAACACAAGTACCTGAATTCGAGCATCCTAAGAAGGCTTTCGGTTGGGCTGCCAGGGATCCCTCCGGTCATCTATCCCCTTTCCATTTCTCTAGAAGAGAAACCGGTGACAAGGATGTGGCATTCAAAGTGTTGTACTGTGGAATTTGTCACTCGGATCTGCACATGGTGAAGAACGAATGGGGCTTCTCCATCTATCCTATGGTCCCTGGGCATGAAGTTGTTGGTGTAGTGACACAAGTGGGAAGCAAGGTTCAAAAGTATAAAATTGGAGACAGAGTCGGCGTGGGATGCTTGGTTCAATCGTGCCGAACCTGTCAAGACTGTAGTGATAATCTTGAAAATTATTGCTCCTCATATACTCTAACATACGGTGCAAAATCCAGCGATGGAACCATCACATATGGAGGTTACTCTGACTCAATGGTTGTTGATGAGCACTTTGTGGTTCGAATTCCAAATGAGTTACCTCTTGATGCTGCTGCTCCTCTGCTATGTGCTGGGATCACAGTGTATAGCCCTCTCAGATATTTTGGACTAGACAAACCTGGCTTGCATGTTGGTGTCGTTGGTCTTGGTGGGTTAGGCCACATGGCGGTCAAATTTGCCAAGGCTTTTGGGGCTAAAGTCACTGTAATTAGTACCTCACCCAACAAAAAACAGGAAGCAATGCAACATTTAGGAGCTGATTCTTTTTTGATAAGTCGCGACCAAGATCAGATGCAGGCTGCAAAGGAAACTTTGGATGGTATCATTGATACAGTTTCAGCTGTTCATTCTCTCGTGCCTCTCATTGGTTTATTAAAGTCACATGGAAAACTTGTAATGGTTGGAGCACCTGAGAAGCCTCTAGAACTGCCAATCATTCCATTACTTATGGGTAGAAAGTTAATAGCCGGTAGTGGTATCGGAGGGTTAAAAGAGACTCAGGAGATGATTGATTTTGCTGCAGAACACAATGTGAAACCTGACATCGAGCTCATTCCTATTGATTATGTGAACGAAGCAATGGAGCGCCTCATCAAAGCAGATGTGAAATATCGCTTCGTCATTGACATTGGAAATACTCTAAAACAAAGCTCTTAA 1092 0.4414 MAATQVPEFEHPKKAFGWAARDPSGHLSPFHFSRRETGDKDVAFKVLYCGICHSDLHMVKNEWGFSIYPMVPGHEVVGVVTQVGSKVQKYKIGDRVGVGCLVQSCRTCQDCSDNLENYCSSYTLTYGAKSSDGTITYGGYSDSMVVDEHFVVRIPNELPLDAAAPLLCAGITVYSPLRYFGLDKPGLHVGVVGLGGLGHMAVKFAKAFGAKVTVISTSPNKKQEAMQHLGADSFLISRDQDQMQAAKETLDGIIDTVSAVHSLVPLIGLLKSHGKLVMVGAPEKPLELPIIPLLMGRKLIAGSGIGGLKETQEMIDFAAEHNVKPDIELIPIDYVNEAMERLIKADVKYRFVIDIGNTLKQSS 363
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip05g00050 363 PANTHER CINNAMYL ALCOHOL DEHYDROGENASE-LIKE PROTEIN 7 362 - -
Aip05g00050 363 ProSitePatterns Zinc-containing alcohol dehydrogenases signature. 73 87 IPR002328 GO:0008270|GO:0016491
Aip05g00050 363 Pfam Alcohol dehydrogenase GroES-like domain 40 153 IPR013154 -
Aip05g00050 363 Gene3D - 169 325 - -
Aip05g00050 363 SMART PKS_ER_names_mod 25 353 IPR020843 GO:0016491
Aip05g00050 363 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 158 324 IPR036291 -
Aip05g00050 363 CDD CAD1 16 354 - -
Aip05g00050 363 Gene3D - 18 355 - -
Aip05g00050 363 PANTHER ALDEHYDE REDUCTASE 7 362 - -
Aip05g00050 363 SUPERFAMILY GroES-like 21 186 IPR011032 -
Aip05g00050 363 Pfam Zinc-binding dehydrogenase 196 319 IPR013149 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip05g00050 Aip-Chr5 577140 578917 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip05g00050 13 360 Monolignol Biosynthesis Gene Families AT4G37990 70.977 4.97e-172 481
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip05g00050 - - gmx:100816901 558.14