Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip05g00049 ATGGCAGCATTACAACATGAATTTGAGCATCCCAACAAGGCTTTCGGATGGGCAGCAAGAGATTCTACTGGTTTTCTTTCCCCTTTTAACTTCTCAAGAAGGGAAACGGGTGAGAAAGATGTGACCTTGAAAATATTGTACTGTGGAATATGCCACACTGACCTTCACTTGTCCAGGAACGACTTCGGCGTTTCCATTTATCCATTAGTACCAGGGCATGAGATAGTTGGGGAAGTAACAGAGGTGGGAAGCAAGGTAGAAAAGTTCAAGATTGGGGACAAAGTGGGTGTTGGAACCATGGTTGACTCGTGCCGTTCATGCCAAAGCTGTGTTGACAACCTTGAGAGTTATTGTCCAAAAAAGATTCCCACCTATGGATTTAAGAATGTCGACGGCACCACCACATACGGAGGCTTTTCCGACACCATGGTAGCCCACGAGGACTTCGTGATTCGAATTCCCCACGGACTACCACTTGATGCAGCCGCTCCTCTGCTCTGTGCTGGGATTACAGTTTATAGCCCCCTCCGGTACTTCGGACTCGATAAGCCCGGTTTACATCTTGCTGTGGTTGGTCTTGGCGGCTTAGGCCACCTCGCTGTCAAGTTCGCCAAAGCTTTTGGCGCTAAGGTCACGGTTGTTAGTACATCGCCTCATAAAAAGAAGGAGGCGTTGGAAAATTTGGGAGCTGACTCCTTTGTCATAAGCACTGACCAAGATCagatgcagGGTGTTATTGGTACAATGGATGGTATTATTGACACGATTTCTGCAGATCATCCTTTGTTACATTTGCTTGGAATGTTGAAGTCTCATGGAAAGCTTGTATTGGTTGGTGCAGTAGCGAAGCTAGAGCTGCCAGTGTTTCCTTTAATCATGGGGAGAAAAATAGTAGCTGGTAGTAGCGTTGGAGGGTTAAAGGAGACTCAAGAAATGATTGACTTTGCGGCTCATCATAATGTAAAAGCTGACATTGAAGTCATTCCTGTTGACTATATCAACACAGCAATGGACCGTCTTCACAAAGCAGATGTGAAATATAGATTTGTCATTGATATCGGAAACACACTCAAGTCTAGCTCTTAA 1086 0.4503 MAALQHEFEHPNKAFGWAARDSTGFLSPFNFSRRETGEKDVTLKILYCGICHTDLHLSRNDFGVSIYPLVPGHEIVGEVTEVGSKVEKFKIGDKVGVGTMVDSCRSCQSCVDNLESYCPKKIPTYGFKNVDGTTTYGGFSDTMVAHEDFVIRIPHGLPLDAAAPLLCAGITVYSPLRYFGLDKPGLHLAVVGLGGLGHLAVKFAKAFGAKVTVVSTSPHKKKEALENLGADSFVISTDQDQMQGVIGTMDGIIDTISADHPLLHLLGMLKSHGKLVLVGAVAKLELPVFPLIMGRKIVAGSSVGGLKETQEMIDFAAHHNVKADIEVIPVDYINTAMDRLHKADVKYRFVIDIGNTLKSSS 361
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip05g00049 361 PANTHER CINNAMYL ALCOHOL DEHYDROGENASE-LIKE PROTEIN 5 360 - -
Aip05g00049 361 Pfam Alcohol dehydrogenase GroES-like domain 39 152 IPR013154 -
Aip05g00049 361 Gene3D - 168 323 - -
Aip05g00049 361 Pfam Zinc-binding dehydrogenase 195 316 IPR013149 -
Aip05g00049 361 ProSitePatterns Zinc-containing alcohol dehydrogenases signature. 72 86 IPR002328 GO:0008270|GO:0016491
Aip05g00049 361 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 157 322 IPR036291 -
Aip05g00049 361 SUPERFAMILY GroES-like 21 185 IPR011032 -
Aip05g00049 361 PANTHER ALDEHYDE REDUCTASE 5 360 - -
Aip05g00049 361 CDD CAD1 15 352 - -
Aip05g00049 361 SMART PKS_ER_names_mod 18 351 IPR020843 GO:0016491
Aip05g00049 361 Gene3D - 17 353 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip05g00049 Aip-Chr5 574212 576230 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip05g00049 12 360 Monolignol Biosynthesis Gene Families AT4G37990 67.429 5.69e-163 458
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip05g00049 - K23232 gmx:100816901 551.206
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip05g00049 05 574212 576230 Aip10g01841 10 48284807 48287157 PCT