Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip05g00048 ATGGCAACATCATCACAAGCTGAATTTGAGCATCCTAGGAAGGCATTTGGATGGGCAGCAAGGGATTCATCTGGAGTTCTCTCCCCTTTCAATTTCTCTAGAAGGGAAATTGGAGAGAAAGACGTTGCATTAAAAGTGTTGTATTGTGGTATATGCCACACGGACCTGCACATGGTGAAGAACGACTGGGGCAATTCCATCTACCCAATGGTCCCCGGGCATGAAGTAGTTGGCATAGTGAAAGAGGTGGGAAGCAAAGTACAAAAGTACAAAGTTGGAGACAAAGTGGGTGTGGGATACTTCGTGGAATCTTGTCGCTCCTGCCAAAATTGTATTGACAATCTTGAGAATTACTGTCCCAAAAACATTATAACACAAGGTGCCAAAAACATCGATGGTACCACCACCTATGGTGGTTACTCTGACTCAATGGTTGTTGATGAACGCTTTGTCATTCGAATTCCTGAAGGGCTACCTCTTGATGCTGCGGCTCCTCTCCTTTGTGCTGGGATTACAGTGTATAGCCCTCTTAAATATTATGGGCTTGATAAGCCTGGTTTGCATGTGGGTGTAGTTGGGCTTGGTGGGCTTGGCCATATGGCAGTGAAGTTTGCCAAAGCCCATGGGGCTAAGGTCACTGTGATCAGTACTTCACCCAATAAAAAGGACGAAGCAATAATACATTTGGGAGCTGATTCATTTTTGGTTAGTCATGATCTAGAGCAGATGGAGGGTGCAAAAGAAAGTTTGGATGGCATCATTGACACAGTTTCTGCTCTTCATTCCATTATACCTCTAATTGGCTTACTAAAGTCTCATGGAAAACTTGTTATGGTTGGGGCAGTTTCGAAGCCTCTGGAAGTGCCAGCCTTTCCTTTGATTATGGGAAGAAAACTTGTTGCTGGTAGTCTGGTTGGAGGGTTGAAAGAGACACAGGAAATGATTGATTTTGCTGCAAAACATAATGTGAAGCCTGAGATTGAAGTTGTTCCCATGGATTACGTGAACATTGCAATGGAGCGCCTCGCTAAAGCTGATGTCAAATATCGATTCGTCATTGATGTTGAAAACACACTAAAACCAAGCTCTTGA 1092 0.4386 MATSSQAEFEHPRKAFGWAARDSSGVLSPFNFSRREIGEKDVALKVLYCGICHTDLHMVKNDWGNSIYPMVPGHEVVGIVKEVGSKVQKYKVGDKVGVGYFVESCRSCQNCIDNLENYCPKNIITQGAKNIDGTTTYGGYSDSMVVDERFVIRIPEGLPLDAAAPLLCAGITVYSPLKYYGLDKPGLHVGVVGLGGLGHMAVKFAKAHGAKVTVISTSPNKKDEAIIHLGADSFLVSHDLEQMEGAKESLDGIIDTVSALHSIIPLIGLLKSHGKLVMVGAVSKPLEVPAFPLIMGRKLVAGSLVGGLKETQEMIDFAAKHNVKPEIEVVPMDYVNIAMERLAKADVKYRFVIDVENTLKPSS 363
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip05g00048 363 ProSitePatterns Zinc-containing alcohol dehydrogenases signature. 73 87 IPR002328 GO:0008270|GO:0016491
Aip05g00048 363 Pfam Zinc-binding dehydrogenase 196 319 IPR013149 -
Aip05g00048 363 SMART PKS_ER_names_mod 25 353 IPR020843 GO:0016491
Aip05g00048 363 SUPERFAMILY GroES-like 22 186 IPR011032 -
Aip05g00048 363 Gene3D - 169 325 - -
Aip05g00048 363 PANTHER CINNAMYL ALCOHOL DEHYDROGENASE-LIKE PROTEIN 5 362 - -
Aip05g00048 363 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 158 324 IPR036291 -
Aip05g00048 363 Gene3D - 18 355 - -
Aip05g00048 363 PANTHER ALDEHYDE REDUCTASE 5 362 - -
Aip05g00048 363 CDD CAD1 16 354 - -
Aip05g00048 363 Pfam Alcohol dehydrogenase GroES-like domain 40 153 IPR013154 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip05g00048 Aip-Chr5 570214 573078 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip05g00048 13 362 Monolignol Biosynthesis Gene Families AT4G37990 69.714 9.12e-169 473
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip05g00048 - K23232 gmx:100816901 575.859