Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip05g00035 ATGAAGAGAATGGATTCGAAAAGCGATAACGGAAGAGAGTTTTCTAGCGACGACGACGCATCTCCGAGATGTGTAATGGAAGCTCCTGTTTCTGAAACAGAATCCGACTCCACCACCAGCAGCAGCAGCAGCTCCTTCTCCCCGGAGAAGCTTCCGCTTCCGCCACCGCCAGCGGTGGCAGCGGCGGCGCTGAGAAAAACGAATTCGAAGGAGAGCAACTTGCAGCAGTGGAAGACGATGATCGACGTGTTCAAGTTCAAGAGCGTTAAGAAATTGACGACGATTCCTCTGCTCTCTGCGGGGAACGAAATCACGAGGAAGGGTTTTGCTAAGAAACTTGCTCGGATTCGAAGCGCCGAAGATAGCATCGACATAGGTGTTATTCCGACGAAGCCTTCTTGGAGGAACTTCGATTACGCGGAACTCGCAGCTGCAACTAACGATTTCAACCCAGAGAACCTGGTTGGTAAAGGTGGCCATGCAGAAGTGTACAAAGGGCACCTACCTGATGGGAAAGTTATAGCAGTCAAGAGACTAATGAAGAATGCCAAGGATGCTGGGGACAGAGCTGGTGATTTCTTGACAGAACTTGGGATCATTGCACACATAAACCACCCAAATGCAACACGCCTTGTTGGGTTTGGGATTGAACGCGGTCACTACTTTGTACTAGAATATGCTCCACATGGCAGCCTTTCTTCGTTGCTCTTTGGTTCTGAATGCTTGGAGTGGAAGACAAGGTTCAAGGTCTCCATTGGAGTGGCAGAAGGGTTGCAGTATCTCCATCAAGATTGTCCTAGAAGAATCATTCATAGGGATATCAAAGCCTCTAACATACTACTCAATGAAAATTATGAAGCTGAGATTTCAGATTTTGGATTGGCAAAGTGGCTTCCAACTAATTGGGCTCACCACGTTGTCTTCCCAATAGAAGGCACATTTGGGTATTTGGCTCCAGAGTACTTCATGCATGGAGTTGTGGATGAGAAGACTGATGTATTTGCATTTGGGGTTTTGTTACTGGAGATCATAACTGGTCGTCGTGCTGTCGATTCAGATAGTAGGCAAAGCCTTGTGATCTGGGCTAAGCCACTGCTGGATACAATGAATGTGACGGAAATAGCAGACCCCAGATTAGAAGGGGAATATGATCCTATTGAAATGAAGCATGCCATGGTAACAGCTTCCTTGTGTGTCCACCAGATATCCTCCAAGAGACCATTCATGAATCAGGTTGTACCCTTACTCAAGGGTGAAGTAGCAGCTATTGAACTCAAACAAAACTTACCAGCAACAAGATCACTCTTGTTAGAGGCATGTGACCTTGAGGACTATACTTGCTCTAGTTACTTGAAGGATCTCAACCGCCATAGGGAGTTAATCAACGAGTGA 1392 0.4677 MKRMDSKSDNGREFSSDDDASPRCVMEAPVSETESDSTTSSSSSSFSPEKLPLPPPPAVAAAALRKTNSKESNLQQWKTMIDVFKFKSVKKLTTIPLLSAGNEITRKGFAKKLARIRSAEDSIDIGVIPTKPSWRNFDYAELAAATNDFNPENLVGKGGHAEVYKGHLPDGKVIAVKRLMKNAKDAGDRAGDFLTELGIIAHINHPNATRLVGFGIERGHYFVLEYAPHGSLSSLLFGSECLEWKTRFKVSIGVAEGLQYLHQDCPRRIIHRDIKASNILLNENYEAEISDFGLAKWLPTNWAHHVVFPIEGTFGYLAPEYFMHGVVDEKTDVFAFGVLLLEIITGRRAVDSDSRQSLVIWAKPLLDTMNVTEIADPRLEGEYDPIEMKHAMVTASLCVHQISSKRPFMNQVVPLLKGEVAAIELKQNLPATRSLLLEACDLEDYTCSSYLKDLNRHRELINE 463
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip05g00035 463 PANTHER RECEPTOR-LIKE CYTOSOLIC SERINE/THREONINE-KINASE 12 463 - -
Aip05g00035 463 MobiDBLite consensus disorder prediction 1 57 - -
Aip05g00035 463 Pfam Protein kinase domain 152 381 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip05g00035 463 SMART serkin_6 149 409 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip05g00035 463 MobiDBLite consensus disorder prediction 1 20 - -
Aip05g00035 463 ProSitePatterns Protein kinases ATP-binding region signature. 155 177 IPR017441 GO:0005524
Aip05g00035 463 Gene3D Phosphorylase Kinase; domain 1 116 226 - -
Aip05g00035 463 ProSiteProfiles Protein kinase domain profile. 149 416 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip05g00035 463 ProSitePatterns Serine/Threonine protein kinases active-site signature. 269 281 IPR008271 GO:0004672|GO:0006468
Aip05g00035 463 SUPERFAMILY Protein kinase-like (PK-like) 133 428 IPR011009 -
Aip05g00035 463 Gene3D Transferase(Phosphotransferase) domain 1 228 429 - -
Aip05g00035 463 PANTHER OS08G0249100 PROTEIN 12 463 - -
Aip05g00035 463 MobiDBLite consensus disorder prediction 31 48 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip05g00035 Aip-Chr5 466596 471852 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip05g00035 137 412 Trihelix Transcription Factor Family AT1G68690 45.965 3.56e-71 236
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VI Aip05g00035 Pkinase 2.8e-38 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip05g00035 - - gmx:100775930 677.552