Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip05g00026 ATGGCCCTTCCCGGTTCTCTGCAGCTGACCCATGGACTGGGACTTTGCAGGAAACCAGGCCGCCATAAACATCCGTTGGTTGTGGGAAGAAGCAAGCTACATTTACTGAATACAGGCCCATCATATCCTCTTTCGTTCATGAAACTGGATAGCTGGGGGATTCGACAATTTCATCACATTAACAGGCCAACATATACATTATCTTACAAGTCTCGCCCATTTACGTGCCATTCTCTTCTAGTACCAAGCCAACCAAGTGAGCTACCTGTTGTTAAGGTGGCTGCTACGTTGTTGGCAAGGTCTATTAATCAGATACATAGTAATCCTGTAATATTAAAGTTGATGCCTTCAGTTGCCATTATCATTTTTGCAACATGGGGTGTTGGTCCATTAGCATGTCAGATAAGGAAATTGCTTTTCCAGAGGAGTGATAATAGTTGGAAGAAAAGTAAAACACATTATATAGTAACTTCTTACCTTCGGCCATTACTTTTATGGACTGGAGCAATACTCTTTTGCAGAGCATTGGAACCAGTAATTCTACCTACAGAAACTAGCCAGGTTATTAAGGAACGGCTTCTGCATTTTGTAAGATCATTGTCAACTGTTCTGGCCTTTGCCTATTGTTTATCAAGTGTGATTCAGCAAACGCAGAAATTCTTATCTGAGAGCACTGATCCAAGTGAGACAAGAAATATGGGATTCCAATTTGCGGGAAAAGCTGTCTATTCGGCCGTATGGATTGCAGCCTTTTCACTGTTCATGGAATTGCTAGGCTTCTCTACACAGAGATGGGTTACTGCTGGAGGTCTTGGGACAGTTTTGTTGACTCTTGCCGGTCGTGAGATATTTACAAATTTCCTTTCAAGTGCGATGATCCATGCAACTCGTCCTTTTGTGATTAATGAGTGGATTCAAACGAAGATTGAAGGATATGAAGTTTCTGGTACCGTTGAGCATGTTGGCTGGTGGTCACCTACTATTGTAAGAGGTGAAGATGGTGAAGCTGTGCACATTCCAAACCACAAATTCACAGTGAATGTTGTGCGAAACCTCACTCAGAAAACACATTGGCGAATCAAAACCCATTTAGCCATTAGTCATTTGGATGTAAAAAAGATTAATAATATTGTTGCCGATATGCGAAAAGTACTAGCGAAAAATCCTCAAGTTGAGCAGCAGAGGTTGCACAGGAGGGTGTTCCTTGACAATATAAATCCTGAAAATCAGGCCCTTTTGATATTGGTGTCATGTTTCGTCAAGACCTCACATTTTGAAGAATATTTATGTGTTAAGGAAGCTATACTGTTGGATCTTCTTAGAGTTATTGGTCATCACAGAGCCCGTCTTGCAACACCAGTTCGCACCCTGCAGAAAATATACAGTGATGCTGAATTGGACAACATACCATACTCAGATTCCCCAATTAGTGGTGCCGGAACTGTATCTAACCGTCCATTATTAATGATTGAATCACCTAACAAGATCAGTGCAGATGATAAAGCAAAAGTCCGATCAGCACGAGCAGCTGGAGATCAAGATAACAAGGCAACTGCGCAAACCAGACTTGAAACAAAGGTTGGTTCATCAGGAATACAAGATGACTCCGAGGCGGATGCCAAAGTCGCTACATCTAATTCTAACACAAACGGAAATGCCAAGACTGTGTTGACACCCAAGCCTGATCCTGAAGTGGGTGAGAACAAGCCGATAAAACCAGATTCCAAGGGTCAGGCTGTTAAAAACATCAAACCTAATATTGAATCCGAGAGTGTAGTTTCCTCCTCGGGAACAGGCAATGTCGATAAAGCCAGTGGAGTTCCTACGAATACACCAACAAAGCAACAAGGGGAAAGGAAACTGGCTACACAACCTCCTCCTGCCCTTTCTCCGGCATCAAGGCCTGTTCTTGAAGAGAATATAGTACTTGGTGTTGCATTGGAGGGATCAAAGAGGACCCTTCCTATTGAGGAGGGTATTGAGACTTCCGCAACTAGAGAGGCAAAGGAAATGGCTGCTTCCCATGGTGGAAATGGATCTCCAAAGGGCGGGGATGGAAATGACAAGAAAAATGTATAG 2079 0.4291 MALPGSLQLTHGLGLCRKPGRHKHPLVVGRSKLHLLNTGPSYPLSFMKLDSWGIRQFHHINRPTYTLSYKSRPFTCHSLLVPSQPSELPVVKVAATLLARSINQIHSNPVILKLMPSVAIIIFATWGVGPLACQIRKLLFQRSDNSWKKSKTHYIVTSYLRPLLLWTGAILFCRALEPVILPTETSQVIKERLLHFVRSLSTVLAFAYCLSSVIQQTQKFLSESTDPSETRNMGFQFAGKAVYSAVWIAAFSLFMELLGFSTQRWVTAGGLGTVLLTLAGREIFTNFLSSAMIHATRPFVINEWIQTKIEGYEVSGTVEHVGWWSPTIVRGEDGEAVHIPNHKFTVNVVRNLTQKTHWRIKTHLAISHLDVKKINNIVADMRKVLAKNPQVEQQRLHRRVFLDNINPENQALLILVSCFVKTSHFEEYLCVKEAILLDLLRVIGHHRARLATPVRTLQKIYSDAELDNIPYSDSPISGAGTVSNRPLLMIESPNKISADDKAKVRSARAAGDQDNKATAQTRLETKVGSSGIQDDSEADAKVATSNSNTNGNAKTVLTPKPDPEVGENKPIKPDSKGQAVKNIKPNIESESVVSSSGTGNVDKASGVPTNTPTKQQGERKLATQPPPALSPASRPVLEENIVLGVALEGSKRTLPIEEGIETSATREAKEMAASHGGNGSPKGGDGNDKKNV 692
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip05g00026 692 MobiDBLite consensus disorder prediction 513 532 - -
Aip05g00026 692 MobiDBLite consensus disorder prediction 656 692 - -
Aip05g00026 692 PANTHER OW CONDUCTANCE MECHANOSENSITIVE CHANNEL 575 689 IPR045042 -
Aip05g00026 692 PANTHER OW CONDUCTANCE MECHANOSENSITIVE CHANNEL 1 577 IPR045042 -
Aip05g00026 692 Gene3D - 194 297 - -
Aip05g00026 692 Pfam Mechanosensitive ion channel 240 446 IPR006685 GO:0016020|GO:0055085
Aip05g00026 692 PANTHER MECHANOSENSITIVE ION CHANNEL-LIKE PROTEIN 575 689 - -
Aip05g00026 692 PANTHER MECHANOSENSITIVE ION CHANNEL-LIKE PROTEIN 1 577 - -
Aip05g00026 692 MobiDBLite consensus disorder prediction 539 556 - -
Aip05g00026 692 SUPERFAMILY Sm-like ribonucleoproteins 283 353 IPR010920 -
Aip05g00026 692 MobiDBLite consensus disorder prediction 582 620 - -
Aip05g00026 692 MobiDBLite consensus disorder prediction 507 635 - -
Aip05g00026 692 Gene3D - 298 351 IPR023408 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip05g00026 Aip-Chr5 373122 378955 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip05g00026 9 679 Mechanosensitive Ion Channel Family AT5G10490 55.835 0.0 711
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip05g00026 K22047 - gmx:100789444 992.645