Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip05g00014 ATGGCTGAGAACTCAAACCTTCTACTATGTTCCGAAAACAACATCACTTGTTTTGATGATGATGATGATGATGGTGATGATTTGGAGTGTAATGTTGCTGCTGCTGATGGGTCTGGAATCTTACCATGTTGGGACCACACCAACAACCTTAACTCCGACCAACCATGTCCGAGTTCAGAAAACCGTGGATCGGGTCCATTGTATTGTTTTGATGTTCTGAGTGAAGAAACAATGAAAGACATGGTGGAAAGGGAAAAAGAGCATTTACCAAAGGAGGATTATCTTAAGAGGCTACGTAGTGGGGACTTGGACCTCAGTGGTAGGAGAGAGACCATTGATTGGATTTGGAAGGCTCATTCCTATTATGGTTTTGGACCCTTGACCTTTTGTCTATCTGTGAACTACTTGGATCGCTTCTTATCCTTGTATGAATTGCCGAGAGGTAAAAGTTGGACTATGCAATTGTTAGCTGTAGCTTGCTTGTCGATTGGGGCGAAAATGGAGGAGGTTAAAGTGCCTCAATCCGTCGACTTACAGGTTGGAGAACCAAAGTTTGTATTTGAAGCTAAAACCATTCAAAGAATGGAACTATTGGTGTTAAGCACATTGAGATGGAAAATGCAGGCTTTAACTCCTTGTTCCTTCATAGATTATTTCCTAAAGAAGATCACTTTCAAGCAACATTTGGTGAATCGGACCATTTCGAGATCAATGCAGCTCACCCTTAGCATAATTAGAGGAGGCAAAATCAATGCAGGGATTGACTTCTTGGAGTTCAGGCCTTCTGAAATCGCAGCGGCTGTGGCGATTTCTGTTTCAAAGGAGTTGCAACAAGCGAAAGATATCGATAAGGCGTTAGCTAGCTTCTTCATTGCAGAGAAGGAGAAAGTTCTAAAGTGTGTTGAATTGATAAGAGACTTGGCATTGATGAATGTTTCTAATTTTGGTGCAAAACATCATGTGCCATTTGTGCCTCAAAGCCCAATTGGGGTGCTTGATGGTGGTGGATGCTTGAGCTATAAGAGTGATGAATTAACAACACTTGGTTCATCATGCCCAAATAGTCCAAAAACTAAAAGGTTCAAATCAGAAGGAGGACCTTGTTGTAATGGGACCTCAGATTCATGA 1128 0.4176 MAENSNLLLCSENNITCFDDDDDDGDDLECNVAAADGSGILPCWDHTNNLNSDQPCPSSENRGSGPLYCFDVLSEETMKDMVEREKEHLPKEDYLKRLRSGDLDLSGRRETIDWIWKAHSYYGFGPLTFCLSVNYLDRFLSLYELPRGKSWTMQLLAVACLSIGAKMEEVKVPQSVDLQVGEPKFVFEAKTIQRMELLVLSTLRWKMQALTPCSFIDYFLKKITFKQHLVNRTISRSMQLTLSIIRGGKINAGIDFLEFRPSEIAAAVAISVSKELQQAKDIDKALASFFIAEKEKVLKCVELIRDLALMNVSNFGAKHHVPFVPQSPIGVLDGGGCLSYKSDELTTLGSSCPNSPKTKRFKSEGGPCCNGTSDS 375
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip05g00014 375 SUPERFAMILY Cyclin-like 67 207 IPR036915 -
Aip05g00014 375 PANTHER CYCLIN-D4-1-LIKE 1 363 - -
Aip05g00014 375 SMART cyclin_7 113 201 IPR013763 -
Aip05g00014 375 Pfam Cyclin, C-terminal domain 211 310 IPR004367 -
Aip05g00014 375 PANTHER CYCLINS 1 363 IPR039361 -
Aip05g00014 375 SMART Cyclin_C_2 210 344 IPR004367 -
Aip05g00014 375 Pfam Cyclin, N-terminal domain 78 207 IPR006671 -
Aip05g00014 375 CDD CYCLIN 107 200 IPR013763 -
Aip05g00014 375 MobiDBLite consensus disorder prediction 354 375 - -
Aip05g00014 375 Gene3D - 79 303 - -
Aip05g00014 375 Gene3D - 91 208 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip05g00014 Aip-Chr5 217120 220025 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip05g00014 74 290 Core Cell Cycle Gene Families AT5G65420 58.904 1.44e-89 269
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip05g00014 K18810 - gmx:100794010 414.461