Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip05g00001 ATGAATCACAGCGCCTTTGTTCCCTCCAAAGCTCATCACTCATCATCGCGAAGAACCCTCGCTCATCACCTAGTCACCACTCACCGCCAGTCACCACCTACCACTCACCACATCGCTGCGCCGCTCACCACCTCACCACTCACCAGCTCACACTCTCATCCTCACTCAACACACACACAAAAGAGGAAAAAAATCAGAAAAGTGGAGAACGGGAAGAAGAAGAGAAGAAGAGAGCAGAGGGAAAGGAAGGAGAGGATGACACCGGCTAGGGCTCCGCCGCGCGGACCATCGTCGTTGCGTGCGCTGACCGTCGCCTCAGCATCGCCATCTCGTGCACTCACCGTCGCCGCTCAGCATCATCATCGCGTGTGCTCACTGTCGCTGCTCAGCATTGTCGTCGTCGCTCAGCATCGTCATCGCCGCTCACCTGAGAAGAAGCTAGAAGATTGGGAATTACTGATCAATGGTTCTTTAAGCTCTTCCTTCTCATCACTGATATTGGATCCGTGCAGCCTGTGTCAGGCGCTGAATCTGTTCCAGGAAGGCAAAGTCAGTGGAAAGGATACAAAGACTAATGAGACTAAGGCTGCTGTGTTGGCTATGGATGAATCAGTATTAGATGTAGATCAGGTGAAAAATCTCATTAAGTTTTGTCCTACCAAAGAAGAGATGGAACTTTTGAAGGGATACACTGGTGACAAAGAGAATTTGGAAAAATGCGAACAGGTTCTAGCTGATAGGCCGCCTGGACTGCTTGACTTCCACTTAGACCTTGTAAGCCTGGAAGCTGCGACTAAGCTGAAAATTGTTTGTGCAATTCTGGTTGTTGTATTTCTGATTTTGTGCACTTCCGTTTGCTATGGCTGA 867 0.496 MNHSAFVPSKAHHSSSRRTLAHHLVTTHRQSPPTTHHIAAPLTTSPLTSSHSHPHSTHTQKRKKIRKVENGKKKRRREQRERKERMTPARAPPRGPSSLRALTVASASPSRALTVAAQHHHRVCSLSLLSIVVVAQHRHRRSPEKKLEDWELLINGSLSSSFSSLILDPCSLCQALNLFQEGKVSGKDTKTNETKAAVLAMDESVLDVDQVKNLIKFCPTKEEMELLKGYTGDKENLEKCEQVLADRPPGLLDFHLDLVSLEAATKLKIVCAILVVVFLILCTSVCYG 288
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip05g00001 288 PANTHER FORMIN-LIKE PROTEIN 15A-RELATED 56 245 - -
Aip05g00001 288 MobiDBLite consensus disorder prediction 25 54 - -
Aip05g00001 288 MobiDBLite consensus disorder prediction 55 80 - -
Aip05g00001 288 MobiDBLite consensus disorder prediction 1 20 - -
Aip05g00001 288 Gene3D - 174 246 - -
Aip05g00001 288 MobiDBLite consensus disorder prediction 25 99 - -
Aip05g00001 288 Pfam Formin Homology 2 Domain 191 244 IPR015425 -
Aip05g00001 288 SUPERFAMILY Formin homology 2 domain (FH2 domain) 191 244 - -
Aip05g00001 288 PANTHER FORMIN-J 56 245 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip05g00001 Aip-Chr5 16980 20160 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip05g00001 196 244 FH2 protein (formin) Gene Family AT5G07740 83.673 7.55e-21 90.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip05g00001 - - aip:107641596 145.206