Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip04g03885 ATGGAGGGGAGAGGGAGTAGTTTTGTGAAGAATGGGGAGCTGAGATTGCCTCCAGGATTCCGGTTTCACCCGACGGATGAAGAGCTGGTGGTTCAATACTTAAAGCGCAAGGTCTTCTCCTGCCCGTTGCCGGCCTCTTTCATTCCTGAGGTTGATATTTGCAAGTCCGATCCATGGGATTTACCAGGTGATTTGGAGCAAGAGAGGTACTTCTTCAGCACGAGGGAGGCCAAATACCCCAACGGGAACCGATCCAACAGAGCCACCAACTCGGGCTACTGGAAAGCCACGGGCTTGGACAAACACATCGCAACTTCAAAAGGCCACCAACTTATTGGCATGAAGAAGACTCTCGTCTTTTACAGAGGCAAGCCTCCTTATGGATCAAGAACAGATTGGATCATGCACGAGTATCGCCTTGTCTCCCACCCCCACCTGCTTCCCATGCAAAATTGGGTTCTCTGTCGCATATTCTTCAAGAGGAGAGCACCTGCTACTGCTAAGAATGTTCTACTGGATCACAATTCCCATTCGGCATCAGCATCAGAAGAGGCCTTCACCATCAGCCATGAGGGCAGCAACTCTAAGGTGGTTTTCTACGATTTCTTGGCACAGAACAGGGCTGATTTGAACCGCGTGACCCCTCCTGCTTCTTCGACCTCTGGCACCAGTGGAATCACCACCGAATCCGATGAGCATGAAGACAGCAGTAGCTGCAACAACTTTCCTTTTTTCAGGTGA 741 0.5061 MEGRGSSFVKNGELRLPPGFRFHPTDEELVVQYLKRKVFSCPLPASFIPEVDICKSDPWDLPGDLEQERYFFSTREAKYPNGNRSNRATNSGYWKATGLDKHIATSKGHQLIGMKKTLVFYRGKPPYGSRTDWIMHEYRLVSHPHLLPMQNWVLCRIFFKRRAPATAKNVLLDHNSHSASASEEAFTISHEGSNSKVVFYDFLAQNRADLNRVTPPASSTSGTSGITTESDEHEDSSSCNNFPFFR 246
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip04g03885 246 MobiDBLite consensus disorder prediction 212 246 - -
Aip04g03885 246 Gene3D NAC domain 25 164 IPR036093 GO:0003677|GO:0006355
Aip04g03885 246 PANTHER NAC DOMAIN-CONTAINING PROTEIN 83-LIKE 7 246 - -
Aip04g03885 246 MobiDBLite consensus disorder prediction 212 227 - -
Aip04g03885 246 PANTHER NAC DOMAIN-CONTAINING PROTEIN 82-RELATED 7 246 - -
Aip04g03885 246 Pfam No apical meristem (NAM) protein 17 140 IPR003441 GO:0003677|GO:0006355
Aip04g03885 246 ProSiteProfiles NAC domain profile. 16 160 IPR003441 GO:0003677|GO:0006355
Aip04g03885 246 SUPERFAMILY NAC domain 12 160 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip04g03885 Aip-Chr4 133079972 133081546 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip04g03885 8 242 NAC Transcription Factor Family AT5G13180 61.290 1.69e-101 293
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Aip04g03885 NAM 2.8e-36 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip04g03885 - - aip:107635778 484.952