Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip04g03882 ATGGGTTGCTTCTCTTGTTTCGATTCGAGGGAGGATCAGAAGCTGAATCCCCATGGCAAGCACGATCACGATCACGATCATATTCGCAAGCAGCATCAGCAGCAGCAGCAGCACCCTCACCCATCCAATCCAGCTCTACCTTCTCACATCTCCCGATTGCCCTCTGGAGCAGACAAGTTGAGGTCCAGAAGTAACGGGGGTTCCAAAAGGGAGCTGCCTGCTCCCAAGGATGGGCCTGGTGTCCAAATTGCTGCTCAAACTTTTACCTTCCGTGAGCTTGCAGCCGCAACTAAGAACTTCAGGCCGGAGTCCTTCATAGGGGAAGGTGGTTTTGGAAGGGTGTACAAAGGGAAGCTGGAGAGCACTGGTCAGATTGTTGCTGTTAAACAGTTAGACAGAAATGGTCTTCAGGGTAATCGGGAATTCCTTGTCGAAGTTCTAATGCTTAGTCTTCTACATCACCCTAACCTTGTGAATCTCATCGGATACTGTGCGGATGGTGAACAGCGCCTCCTTGTTTATGAATTTATGCCATTGGGATCATTGGAAGACCACCTTCATGATCTTCCCCCTGATAAAGAACCATTGGATTGGAACACTAGGATGAAAATAGCTGCAGGGGCTGCAAAAGGACTGGAATACCTGCATGACAAGGCAAATCCTCCAGTTATTTATAGAGACTTCAAGTCATCTAATATATTACTCGACGAAGGATACCACCCCAAGCTTTCTGACTTCGGTCTTGCAAAGCTAGGTCCTGTGGGTGACAAGTCACACGTTTCTACACGTGTGATGGGAACTTATGGTTACTGTGCTCCTGAGTATGCTATGACTGGACAACTGACTGTCAAGTCCGACGTATACAGTTTTGGAGTGGTGTTCTTAGAGCTGATTACAGGCCGGAAAGCAATTGACAGCACCCAACCACATGGAGAACAAAACCTTGTCACATGGGCACGTCCACTGTTCAATGACCGCAGGAAGTTTTCAAAGCTGGCTGATCCAAGGCTGCAGGGGAGGTTTCCTATGCGGGGCCTTTACCAGGCTCTAGCTGTGGCATCCATGTGCATCCAAGAATCCGCTGCCACGCGTCCTCTGATTGGGGATGTGGTGACTGCCCTCTCCTATTTGGCCAACCAGGCATATGACCCCAACAATACTGGGCATGGTTATAGGGGCTCTGGTGATGACAAAAGGAACAGAGATGATAAAGGTGCAAGATTATTGAAAAATGATGAAGCTGGAGGATCTGGACACAGATGGGACTTGGAAGGATCTGAGAAAGATGAGTCTCCCAGAGAAACTGCAAGGATGTTGAACAGAGATCTTGACAGAGAACGTGCTGTGGCTGAAGCAAAAATGTGGGGAGAGAACTGGAGAGAAAAAAGAAGACAGAGTTTGGAACCAGGAAGTTTTGATGCTACTAATGTGTAG 1434 0.4826 MGCFSCFDSREDQKLNPHGKHDHDHDHIRKQHQQQQQHPHPSNPALPSHISRLPSGADKLRSRSNGGSKRELPAPKDGPGVQIAAQTFTFRELAAATKNFRPESFIGEGGFGRVYKGKLESTGQIVAVKQLDRNGLQGNREFLVEVLMLSLLHHPNLVNLIGYCADGEQRLLVYEFMPLGSLEDHLHDLPPDKEPLDWNTRMKIAAGAAKGLEYLHDKANPPVIYRDFKSSNILLDEGYHPKLSDFGLAKLGPVGDKSHVSTRVMGTYGYCAPEYAMTGQLTVKSDVYSFGVVFLELITGRKAIDSTQPHGEQNLVTWARPLFNDRRKFSKLADPRLQGRFPMRGLYQALAVASMCIQESAATRPLIGDVVTALSYLANQAYDPNNTGHGYRGSGDDKRNRDDKGARLLKNDEAGGSGHRWDLEGSEKDESPRETARMLNRDLDRERAVAEAKMWGENWREKRRQSLEPGSFDATNV 477
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip04g03882 477 MobiDBLite consensus disorder prediction 458 477 - -
Aip04g03882 477 Pfam Protein kinase domain 103 309 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip04g03882 477 CDD STKc_IRAK 106 374 - -
Aip04g03882 477 PANTHER SERINE/THREONINE-PROTEIN KINASE PBS1 1 469 - -
Aip04g03882 477 MobiDBLite consensus disorder prediction 384 403 - -
Aip04g03882 477 ProSiteProfiles Protein kinase domain profile. 100 377 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip04g03882 477 MobiDBLite consensus disorder prediction 9 80 - -
Aip04g03882 477 Gene3D Transferase(Phosphotransferase) domain 1 177 390 - -
Aip04g03882 477 PANTHER OS07G0668900 PROTEIN 1 469 - -
Aip04g03882 477 MobiDBLite consensus disorder prediction 11 33 - -
Aip04g03882 477 SUPERFAMILY Protein kinase-like (PK-like) 84 372 IPR011009 -
Aip04g03882 477 ProSitePatterns Protein kinases ATP-binding region signature. 106 129 IPR017441 GO:0005524
Aip04g03882 477 MobiDBLite consensus disorder prediction 408 443 - -
Aip04g03882 477 Gene3D Phosphorylase Kinase; domain 1 74 176 - -
Aip04g03882 477 ProSitePatterns Serine/Threonine protein kinases active-site signature. 223 235 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip04g03882 Aip-Chr4 133023357 133028450 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip04g03882 1 377 Glycoside Hydrolase AT3G07070 63.660 3.16e-170 484
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-1 Aip04g03882 Pkinase 1.5e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip04g03882 K13430 - tcc:18608901 821.617