Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip04g03851 ATGGCGGAATCATCTCGCGAGGAGAACGTGTACATGGCAAAGCTTGCGGAGCAGGCGGAGCGATACGAGGAGATGGTGGAGTTCATGGAGAAGGTGGCGAAGTCTTCTGACAACGAAGAGCTGACGGTGGAGGAGAGGAACCTGCTGTCAGTTGCTTACAAGAACGTTATCGGTGCGAGGAGGGCTTCGTGGAGGATCATCTCGTCGATTGAGCAGAAGGAGGAGAGTAGGGGAAACGAGGACCATGTTGCAACCATCAAGGAGTATAGGGGAAAGATTGAAGCTGAGCTCAGCAAGATCTGTGATGGCATTTTGAACCTCCTTGAGTCCAACCTTGTGCCCTCTGCTACCACCCCTGAGTCCAAAGTGTTCTATCTCAAGATGAAGGGTGATTATCATAGGTACCTCGCTGAGTTCAAGACTGCTGCAGAGAGAAAAGAAGCTGCTGAGAGTACTTTGTTAGCGTACAAGTCTGCTCAGGATATTGCTCTTGCAGACCTTCCTCCTACTCACCCGATAAGGCTGGGTCTGGCACTCAATTTCTCTGTGTTCTATTATGAAATTCTTAACTCACCAGATCGTGCTTGTAATCTCGCCAAGCAGGCATTTGATGAAGCAATTGCTGAGCTTGACACCTTGGGTGAAGAATCATACAAGGACAGTACCTTGATCATGCAACTTCTCAGAGACAATCTGACTTTGATGAAGCCGGAGATGAGATCAAGGAAACATCTAAGCAACAACCAGGCGAGGGGCAGCAGTAGCATGATAAATCTGTGCATGTCATGCGCCGAGTGA 798 0.49 MAESSREENVYMAKLAEQAERYEEMVEFMEKVAKSSDNEELTVEERNLLSVAYKNVIGARRASWRIISSIEQKEESRGNEDHVATIKEYRGKIEAELSKICDGILNLLESNLVPSATTPESKVFYLKMKGDYHRYLAEFKTAAERKEAAESTLLAYKSAQDIALADLPPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFDEAIAELDTLGEESYKDSTLIMQLLRDNLTLMKPEMRSRKHLSNNQARGSSSMINLCMSCAE 265
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip04g03851 265 PANTHER 14-3-3 PROTEIN 2 246 IPR000308 -
Aip04g03851 265 PRINTS 14-3-3 protein zeta signature 209 238 IPR000308 -
Aip04g03851 265 PRINTS 14-3-3 protein zeta signature 120 142 IPR000308 -
Aip04g03851 265 PRINTS 14-3-3 protein zeta signature 182 208 IPR000308 -
Aip04g03851 265 PRINTS 14-3-3 protein zeta signature 155 181 IPR000308 -
Aip04g03851 265 PRINTS 14-3-3 protein zeta signature 89 113 IPR000308 -
Aip04g03851 265 PRINTS 14-3-3 protein zeta signature 40 69 IPR000308 -
Aip04g03851 265 SUPERFAMILY 14-3-3 protein 5 234 IPR036815 -
Aip04g03851 265 PANTHER 14-3-3-LIKE PROTEIN GF14-F 2 246 - -
Aip04g03851 265 SMART 1433_4 6 252 IPR023410 -
Aip04g03851 265 PIRSF 14-3-3 1 251 IPR000308 -
Aip04g03851 265 Coils Coil 12 39 - -
Aip04g03851 265 Pfam 14-3-3 protein 12 234 IPR023410 -
Aip04g03851 265 ProSitePatterns 14-3-3 proteins signature 1. 46 56 IPR023409 -
Aip04g03851 265 Gene3D - 1 248 IPR036815 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip04g03851 Aip-Chr4 132730406 132733375 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip04g03851 4 252 14-3-3 family AT3G02520 85.542 7.28e-157 435
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip04g03851 K06630 - gmx:547657 432.565
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip04g03851 04 132730406 132733375 Aip04g03851 04 132730406 132733375 ECH