Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip04g03838 ATGGGAACAACAGGATCTGGAAAATCGAAACTTTCCATCAACTTGGGGACCCAATTCCCCTGTGAAATAATTAATTCAGATAAAATCCAAGTGTACAGAGGGCTGGACATTGTGACGAACAAGATGGCACCTTCCCAACAAGGTGACATACCCCATCACTTGCTAAGCATAATTGATGATCCTGACTATGATTTCACTGCTAATGAATTCTGCAAAAATGTTCATGATGCCCTTGAACTCATAACCGAAAAAGGGAACATACCCATCATTGTTGGAGGCTCAAACTCTTACATTGAGGCATTAGTGAATGATCCCAAGGGTGAATTTCAATCCAAATATGATTGTTGCTTCATTTGGCTTGATGTGTCTCTCCCTGTTCTGTATGATTACTTAGACATTAGGGTTGATGAGATGGTTGATGCTGGTGTTGTTGATGAGATTCGTCGTGAGGCTTATGATCCCAAGAATTCTGATTATTCTCGTGGGGTTAGAAGAGCCATTGGAGTCCCTGAACTTCATTACTATTTTCACATCCTTCAGAATGATTCAAGTGATGATGTTGATGAGGCTTATAAGACTCGGGTGTTTCTTCATGCAATTGATACCATGAAGATCAACACTCATAAGTTGGCCAAGAATCAAGTCACCAAGATCAAAAGGATGGTCAATGAACTTGGTTGGAAGATGACTAGAATTGATTCTACACAAGTTTTTGAGGCTGTTTTGAGAGGAGAAGATTACAACCATCTTTATCAAGAGATTGTGCTCAAACCAAGTGTGGAGGTTGTTCGGAGGTTCCTAGATTATTGA 810 0.4012 MGTTGSGKSKLSINLGTQFPCEIINSDKIQVYRGLDIVTNKMAPSQQGDIPHHLLSIIDDPDYDFTANEFCKNVHDALELITEKGNIPIIVGGSNSYIEALVNDPKGEFQSKYDCCFIWLDVSLPVLYDYLDIRVDEMVDAGVVDEIRREAYDPKNSDYSRGVRRAIGVPELHYYFHILQNDSSDDVDEAYKTRVFLHAIDTMKINTHKLAKNQVTKIKRMVNELGWKMTRIDSTQVFEAVLRGEDYNHLYQEIVLKPSVEVVRRFLDY 269
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip04g03838 269 Gene3D Crystal structure of tRNA isopentenylpyrophosphate transferase (bh2366) domain 124 229 - -
Aip04g03838 269 PANTHER ADENYLATE ISOPENTENYLTRANSFERASE 1 268 - -
Aip04g03838 269 Pfam IPP transferase 110 220 - -
Aip04g03838 269 Pfam IPP transferase 30 104 - -
Aip04g03838 269 Gene3D - 1 267 IPR027417 -
Aip04g03838 269 PANTHER TRNA DIMETHYLALLYLTRANSFERASE 1 268 IPR039657 -
Aip04g03838 269 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1 192 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip04g03838 Aip-Chr4 132647849 132648658 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip04g03838 111 268 C2H2 Transcription Factor Family AT2G27760 33.333 9.56e-17 77.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip04g03838 K10760 - gmx:121173984 348.206