Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip04g03830 ATGGAACGTCAAGGTCGTTTCCTCTTTCAAAATTTCCAGCAACGAGAAGGAAGCTCTTCTGGTTCAAACAAGAACAATAATAATAATGCACGTGGTGAAGAAGATCAATGGTTATTGCCACCTAACAAGGTGGTAGATATCATGCGACAGGTTCTACCATCACATGCACAAATCTCTGAGGATGCAGTAGAAGCAATGCAAGATTGTGTGTGTGAGTTTGTGACACGTGTGACTGTTGAGGCCAACAAGAAGTGCAAATCTGAGGGGAGGAAAACTCTTAGTGTTAATGACTTGTTATTAGCAATGAACGATGATTTGGCCTTAAATAAATATGCTGAGCTTCTTGCAATTTACTACGATCGTTACTCCCTCCAAAATCAGCCACCATTTTCCCCCCAAGGTATGGCAACAGAATCAGATCCTAGGTCGACGCAGGTGAAGGCCACGCTGCGCCTTGGCTCAGAATCGTACACCGTTCAGGCGAATAAAGGTTGTTTATCAGAGCAACTGGTTTCACTGAAAGAGGAAAGTATGAGCATATTGAAGGAGTTCATAACAAAACATAACATCCCTCAAGATGTCCCTGATGAGCCATTAGAATCTTCTTCAGAAGATGATGATGATACACCTGAGAAACCTCAAGTGAAGTCTAAGAAGACTAAGTTTACTTAG 672 0.4211 MERQGRFLFQNFQQREGSSSGSNKNNNNNARGEEDQWLLPPNKVVDIMRQVLPSHAQISEDAVEAMQDCVCEFVTRVTVEANKKCKSEGRKTLSVNDLLLAMNDDLALNKYAELLAIYYDRYSLQNQPPFSPQGMATESDPRSTQVKATLRLGSESYTVQANKGCLSEQLVSLKEESMSILKEFITKHNIPQDVPDEPLESSSEDDDDTPEKPQVKSKKTKFT 223
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip04g03830 223 MobiDBLite consensus disorder prediction 13 36 - -
Aip04g03830 223 MobiDBLite consensus disorder prediction 185 223 - -
Aip04g03830 223 Pfam Histone-like transcription factor (CBF/NF-Y) and archaeal histone 39 102 IPR003958 -
Aip04g03830 223 MobiDBLite consensus disorder prediction 13 33 - -
Aip04g03830 223 Gene3D Histone, subunit A 25 163 IPR009072 GO:0046982
Aip04g03830 223 PRINTS CCAAT-binding transcription factor subunit A signature 105 123 - -
Aip04g03830 223 PRINTS CCAAT-binding transcription factor subunit A signature 85 103 - -
Aip04g03830 223 PRINTS CCAAT-binding transcription factor subunit A signature 66 84 - -
Aip04g03830 223 MobiDBLite consensus disorder prediction 208 223 - -
Aip04g03830 223 SUPERFAMILY Histone-fold 36 126 IPR009072 GO:0046982
Aip04g03830 223 PANTHER T2E6.7-RELATED 137 221 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip04g03830 33 129 CCAAT-HAP3 Transcription Factor Family AT1G21970 41.509 9.46e-23 90.9
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NF-YB Aip04g03830 CBFD_NFYB_HMF 2.8e-17 CL0012
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip04g03830 - K08065 minc:123216701 100.138