Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip04g03820 ATGAGTGATTCTACTTCTTCATGTTTGGCCATTGCGGAGAAGAAGGCACAGAAGCCAGGTGGCTGTTCTGGCATTTTCTTTCAGCTCTTTGAATGGAAGAGGAAGCTTGCAAAGAAGAAGCTCTTCTCTAAGAAGCTTCTGCCTCCTGCTCGTGCTAAAAGGTTTAAGGGAGATGAAAAAATGCCAAATTCCAAGATCCACTTGATTGCTAATGAGAATAGTGGAGGTTTCCCAAGTGCCAAGAAAGGTGGGAATTATGGCTTTGAGGTGATAGTGCCACAAAAGAGCGAAATGCGAGCTCCCGGTCTGGTAGCTAGATTGATGGGCCTAGAATCTATTCCGGCTTCAAAGCGTGATAAGTCCAAGAAAGGTTTGCATTTGGATGATTTTGGTGATAATGAGAAGGAGTGTAAGAGTAATTGTGAGTTAGATAGACAAGGCATGGATTCGGAAATAGTGGTTATGAAGCATGATTCAAGACCTGAGAAGCTTCAGAAGACCGGGACGGATGAGAGACGGGCAGTGACGAGGTTTGGAGCCGAGGCCTTGCAAATTAAGCATGTTTTGGCCAGAGCAAGAAAGTATCATCATCATCATCATCATCATCACCATCCAAAGCTTGCATCTCAGTTGATGAGCCCAAGAATTCCTTCAACGAAGAGTGCCTCTCGAAGCTCTAGGTTGATAGGAGCAGCTACTAGAATTTTGGAACCTGGATTACAGGCTAGAAGCAGAGCTAAAGGTTCTCTTCTCACATATCATGGTTCGGCATTTCCTCCTAAAACCAGCATTGTGACAAATTGTGAGGGACCTAGTTCGGCCGTTGTGCAAAATCAACTTGACTATGATGCAAGCACAGCCAAGCCTTTGATGGGGCAGACTTCTTGCAAAAATTGTGGTAATTTAGTTGATGTTGTTGACTGCAAGCTGGATGTTCCTTTACCTGTTGTGTCAGATGTGTTTGCAACAACCTCTGTGGTATCATCACAGAAGAATGGTAGGTTCTTCACTCCCTCTCCCTCTCCCTCTCATGAACAAGAAAGAGAAATTGTTCTTCTAAGAAGTCAGGAAAAGCTCATGTCTCTTGCTACTGAGAAAGAAGGAATGGATAATGTGCATCAATTTTGTAACAAACACATCACCAAGAGAATGACAGTGCCCCGTGACGGTCCAGATATCTGGAACCCATCGAGCCAATCAGTTAGTACTGGAGAGGGTGATGCATCTTCCTCTGCATTAAAGCACAAACCGCAAACACAAGAACGAATGTTGAGCAACGAAAGAAGTTCATCTGCTTCTACAATGAGTAATACAGGAGTAAAAAGAATGTCATCATCTACAAGCAGTGTGAATGAGACTAAAGACTTTGTTGCTCTGAATAGAAGCCTAAGTGGTCAAGTGAGGATCAGGTCACCCACCAAAGTAGATAGTTCCAAATTCGACCTTGAGAAAAAACCAAGTTTTAGTCAGAACAAATCCTTGTCTGATGTAAGGACATTAGAGAGAAAAAGAAGAACCTCAAATGTCATGCAAGGTAAAAGTACAGCTCCTTGTTCAGCTGGAGTGAGTCAGAGAAATCTTCGATCCGATGCACTTGTCGGGAAACAAAAGGGATTCGTCGCATCCTCCTGGAATTGTGCTAACATCAAAAGTAAACAATGCAGCAAGGAGAAAACAGTGAAGGTTAATGACAACAAAACCAATGAGGTGGTTTCTTTTACATTTAATTCTCATTTGAAGCAAAAGATAGGGATAGATTCTGAGAAGGAAGAGATAAGCAACAATATTGAGAGGAAGACATGCTTCCAAAGACCTTCGCCCTTGCGAGTTGATGGGTTAAGTGCCTTTCTAGAACAAAAGTTGAAAGAATTAACTTCTCAAGAAGATTATGATTTGGCTACAGGTACTCCATCAAAAAAATCAACTGCAATGATTCTTCAGGAGCTGATATCTGCTCTAAGTTCAGAGAGACTGATTTGCTGCAATGGTCATATGTTTGATGAAAACTTCCGGTTTCATAATGGGCCAAGACAAGAAGCGATATTCGGAGCTTCTTGCAATGGTAATCACCACAGTCCTGGATCAGTTCTTGAAGCTTCCTTTTCTTCTAGTAGTTTGGATGAAAGCTCAGTTTCAGGGCAGGGTTATCACCCTTACTCCATGAATAACTCTTATGATCAGCTGGAACAATTGGAACATGATGCTGAACTCACAGATTCTGCAACAACATCTGTAAACAAAGGGAGAGTAGTTTGTGAGCTACTGATTGATCTTGTCAACCAAATTCCCGGACCATTACAAAGCTTATATTCTTTTGGGCCAAGTTTGACAAGAAGCAAGCTCACTCATATGAAAGATGTTATCTTGAATGCTGAATTGGTTATCGGAATCGACACTGACGAAGACCCGGAACTAGTAGTTCATCGGTTCCTCCTCGACGAACTGGACACCATGGCAAGTGATATTATGTGGAGAAATTTTAATCTCTTCCTGGGCTGCACCGATTCTAGGCATCAAAACAAACTCAAGGGGTTCCTCTTTGATTGTGTTATAGAATATCTAGAATCAAATTGCTGCCGTTATCTTGAGTGTGGATTCAAGCTATGGTGGACTAAATTGCAGCAATGCTTGAAGTCCAAGGTGTTGGCTCAGGAGGTAAAGACAGAGATCGAAAAATGGGGGAGCATGTCTGGGATGGAACATGATGAAATAATAGAATGGGAAATGAGCTACTCTTTGGGGAAATGGATAGATTTTGATATTGAAACATTTGAGGCTGGTGTTATGATAGATAGGTGCATATTTCAAAGTTTGTTGGATGAAATTGTTCAAGACCTTGTAGTAGGTTGCAAACACCAGCATTGTTCATCATGCAATATCTATCTCCCTATCACTAATAGTCATTGCTAG 2910 0.4182 MSDSTSSCLAIAEKKAQKPGGCSGIFFQLFEWKRKLAKKKLFSKKLLPPARAKRFKGDEKMPNSKIHLIANENSGGFPSAKKGGNYGFEVIVPQKSEMRAPGLVARLMGLESIPASKRDKSKKGLHLDDFGDNEKECKSNCELDRQGMDSEIVVMKHDSRPEKLQKTGTDERRAVTRFGAEALQIKHVLARARKYHHHHHHHHHPKLASQLMSPRIPSTKSASRSSRLIGAATRILEPGLQARSRAKGSLLTYHGSAFPPKTSIVTNCEGPSSAVVQNQLDYDASTAKPLMGQTSCKNCGNLVDVVDCKLDVPLPVVSDVFATTSVVSSQKNGRFFTPSPSPSHEQEREIVLLRSQEKLMSLATEKEGMDNVHQFCNKHITKRMTVPRDGPDIWNPSSQSVSTGEGDASSSALKHKPQTQERMLSNERSSSASTMSNTGVKRMSSSTSSVNETKDFVALNRSLSGQVRIRSPTKVDSSKFDLEKKPSFSQNKSLSDVRTLERKRRTSNVMQGKSTAPCSAGVSQRNLRSDALVGKQKGFVASSWNCANIKSKQCSKEKTVKVNDNKTNEVVSFTFNSHLKQKIGIDSEKEEISNNIERKTCFQRPSPLRVDGLSAFLEQKLKELTSQEDYDLATGTPSKKSTAMILQELISALSSERLICCNGHMFDENFRFHNGPRQEAIFGASCNGNHHSPGSVLEASFSSSSLDESSVSGQGYHPYSMNNSYDQLEQLEHDAELTDSATTSVNKGRVVCELLIDLVNQIPGPLQSLYSFGPSLTRSKLTHMKDVILNAELVIGIDTDEDPELVVHRFLLDELDTMASDIMWRNFNLFLGCTDSRHQNKLKGFLFDCVIEYLESNCCRYLECGFKLWWTKLQQCLKSKVLAQEVKTEIEKWGSMSGMEHDEIIEWEMSYSLGKWIDFDIETFEAGVMIDRCIFQSLLDEIVQDLVVGCKHQHCSSCNIYLPITNSHC 969
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip04g03820 969 PANTHER DNAA INITIATOR-ASSOCIATING PROTEIN 8 947 - -
Aip04g03820 969 MobiDBLite consensus disorder prediction 385 451 - -
Aip04g03820 969 MobiDBLite consensus disorder prediction 392 451 - -
Aip04g03820 969 Pfam DUF761-associated sequence motif 94 119 IPR032795 -
Aip04g03820 969 Pfam Domain of unknown function (DUF4378) 804 941 IPR025486 -
Aip04g03820 969 PANTHER PHOSPHATIDYLINOSITOL N-ACETYLGLUCOSAMINYLTRANSFERASE SUBUNIT P DOWN SYNDROME CRITICAL REGION PROTEIN 5 -RELATED 8 947 - -
Aip04g03820 969 MobiDBLite consensus disorder prediction 469 522 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip04g03820 Aip-Chr4 132438284 132442710 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip04g03820 1 946 TRM (TON1 Recruiting Motif) Superfamily AT1G67040 31.385 5.07e-86 292
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip04g03820 - - aprc:113861902 1117.45
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip04g03820 04 132438284 132442710 Aip04g03820 04 132438284 132442710 ECH