Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip04g03816 ATGGCTGAAGTTGTTGAATACCATGCAAATTCCAACACAAACACCCCTACCACCCCACCATCTTTGAAGCTCTTTGGCATCAACATTCATCACAAGATCTCAAATAAAGATCAAAACACTACTACTACTACTACTCATAAAAAAGAACAACCATGTTTGATGAATCAATCACCATCACCACCACAGAAATCTGAACAAGATAATTGTTCTTTTGATGACCCTTTTAATAACTCATCACCATCATCATCAAGGGATGCAAGAAAATATGAGTGCCAGTATTGTTGTAGAGAGTTTGCAAATTCACAAGCACTTGGTGGGCACCAAAATGCACACAAGAAAGAGAGGCAGCTCCTGAAACGTGCTCAAATGCAAGCTGCACGTGGCTTTGTTGCTTCACACTTTCAAAGCACAATCATGTCATCATCACAGGTGCCACATCTTCTAGCTGTTGGTGGTGGTGCCGGTGTGCCGCCGCCACAACCTTCTTCTCAGGCATCTTCATGGTTCTATTATACAAGTGGTGGTGGCACACCCACCAGCTTTGGTGATAATGCATACCATTCAGGAGGAGCCATGGCTCCCCCTGTAAGTCGTGTCTATGGTGGTGGTGGTGACGACGAAATCTACTTTGAAGAATCTCACATGATCACAACAAATTTGTTACACCACCACCGTTACCAATATCTGTCAAGATTTGATAGTCTTGACAGTAATGGTAACCGTGGTGGTGGTCAACTTAATAGTACTGAACAAGGATTAAGATTGAATTTGCATCTTAGTTTATAA 786 0.4224 MAEVVEYHANSNTNTPTTPPSLKLFGINIHHKISNKDQNTTTTTTHKKEQPCLMNQSPSPPQKSEQDNCSFDDPFNNSSPSSSRDARKYECQYCCREFANSQALGGHQNAHKKERQLLKRAQMQAARGFVASHFQSTIMSSSQVPHLLAVGGGAGVPPPQPSSQASSWFYYTSGGGTPTSFGDNAYHSGGAMAPPVSRVYGGGGDDEIYFEESHMITTNLLHHHRYQYLSRFDSLDSNGNRGGGQLNSTEQGLRLNLHLSL 261
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip04g03816 261 SUPERFAMILY beta-beta-alpha zinc fingers 86 116 IPR036236 -
Aip04g03816 261 MobiDBLite consensus disorder prediction 1 84 - -
Aip04g03816 261 Gene3D Classic Zinc Finger 63 142 - -
Aip04g03816 261 MobiDBLite consensus disorder prediction 7 22 - -
Aip04g03816 261 ProSiteProfiles Zinc finger C2H2 type domain profile. 89 116 IPR013087 -
Aip04g03816 261 PANTHER ZINC FINGER PROTEIN 5 12 261 IPR044299 GO:0010090
Aip04g03816 261 MobiDBLite consensus disorder prediction 32 84 - -
Aip04g03816 261 ProSitePatterns Zinc finger C2H2 type domain signature. 91 111 IPR013087 -
Aip04g03816 261 PANTHER ZINC FINGER PROTEIN GIS3 12 261 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip04g03816 Aip-Chr4 132402110 132403171 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip04g03816 21 149 C2H2 Transcription Factor Family AT1G67030 44.776 3.34e-24 94.7
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip04g03816 04 132402110 132403171 Aip04g03816 04 132402110 132403171 ECH