Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip04g03808 ATGACCAATTCATTTTGTGAGGAATTAGGAAAAGGAGCATTTGGTGTTGTATATAAAGGTAGTTTAAGCGATAATCGTCAAGTAGCAGTGAAGATATTGAAGGAGTCCAAAGATAATGGAAAAGAATTTAATGGAGAAGAATTGAAGGGAGAAGAATTCATAAATGAGGTTGCAAGTATTATTGGAACAGCTCATGTGAATATTGTCCCATTTTTAGGATTTTGTTACAAGCCAAATAAAAGAGCTTTGATTTATGAATTTATGCCAAATGGTTCTTTAGATAAATTTATTAATGAAGAGGTGTGTAAGTTGGATGGGAGCAGACTCTACCAAATTATAATTGGCATTGCTCGAGGACTAGAATATTTACATTGGAGATGTAATACCAAGATTTTACATCTTGATATTAAACCTCAAAATATTCTTTTGGATGAAGATTTTGTTCCTAAAATTGCTGATTTCGGACTGGCTAAAATATGCACAAAGAAAGAGAGTATTGTATGTCTACAACGCGTAGGAGGAACTGCAGGATATATTGCACCAGAAGTATATAGTCAAATATACACTGAAGTTTCTCGAGTTTCTCATAAATCTGATGTGTATAGTTATGGAAAGTTGATTCTTAAAGTAATGGGAGGAAAAAAGAATTATAATAATAATGATCTACATACCAGTGAAATGTATTTTACAGATTGGATTTATGAAGAGTTGGAGCAAGATAATTTTTCAACAAGATGCTTGACAGACATAGATGATGAGAATGATTTGACAAAGAAGATTATTTTGATAAGTATGTGGTGTATTCAAAAAAATCCATCAGACAGACCTTGCATGAAAAAGGTGATAGAAATGTTAGAAGGACCACTTGATTCTGTCGCGTTTCCTCCAAAGCCAGAAAATTAA 903 0.3256 MTNSFCEELGKGAFGVVYKGSLSDNRQVAVKILKESKDNGKEFNGEELKGEEFINEVASIIGTAHVNIVPFLGFCYKPNKRALIYEFMPNGSLDKFINEEVCKLDGSRLYQIIIGIARGLEYLHWRCNTKILHLDIKPQNILLDEDFVPKIADFGLAKICTKKESIVCLQRVGGTAGYIAPEVYSQIYTEVSRVSHKSDVYSYGKLILKVMGGKKNYNNNDLHTSEMYFTDWIYEELEQDNFSTRCLTDIDDENDLTKKIILISMWCIQKNPSDRPCMKKVIEMLEGPLDSVAFPPKPEN 300
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip04g03808 300 Gene3D Phosphorylase Kinase; domain 1 9 88 - -
Aip04g03808 300 PANTHER RUST RESISTANCE KINASE LR10-RELATED 1 298 IPR045874 GO:0004672
Aip04g03808 300 ProSiteProfiles Protein kinase domain profile. 3 289 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip04g03808 300 Pfam Protein kinase domain 7 283 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip04g03808 300 PANTHER TYROSINE KINASE FAMILY PROTEIN 1 298 - -
Aip04g03808 300 SUPERFAMILY Protein kinase-like (PK-like) 5 285 IPR011009 -
Aip04g03808 300 SMART serkin_6 3 285 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip04g03808 300 ProSitePatterns Protein kinases ATP-binding region signature. 9 31 IPR017441 GO:0005524
Aip04g03808 300 PIRSF ILK 3 293 - -
Aip04g03808 300 Gene3D Transferase(Phosphotransferase) domain 1 89 293 - -
Aip04g03808 300 ProSitePatterns Serine/Threonine protein kinases active-site signature. 131 143 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip04g03808 Aip-Chr4 132322868 132323770 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip04g03808 1 298 Receptor kinase-like Gene Family AT5G38280 54.934 6.49e-107 323
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Aip04g03808 Pkinase 1.3e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip04g03808 - - aip:107637474 617.076