Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip04g03804 ATGACAAATTCATTTCGTGATAAACTAGGACAAGGTGGATATGGTACTGTATACAAAGCAAGTTTAACTGATGATCGTCAAGTTGCGGTAAAGATATTAAGTGAATCTAAGGGAAGTGGGGAAGAATTCATAAATGAAGTTGCTAGTATTAGTAGGACATCTCATGTGAATATTGTCTCACTTTTAGGATTTTGTTATGATCAAGGCAAAAGAGCACTCATTTATGAATTCATGCCTAATGGTTCTCTAGATAAATACATCTACAAAGCAAAATCTGCCGAAGCTTTTCGTAGTTTGGATTGGAGTGTTTTATACAACATTGCAATTGGTATTGCTCAAGGGTTAGAATACTTGCATCAAGGATGCACAACAAAAATTTTGCATCTTGATATAAAACCTGAAAACATTCTTCTAGATGAACACTTTTGTCCAAAAATCTCAGATTTTGGATTAGCTCGAATCTGTCAAAAGAAAGAGAGTAATGTATCTATTTTAGGCACAAGAGGAACTCCAGGTTACATTGCACCAGAAATATTTAGTCGAGCATACGGTAGAATTTCTGATAAATCTGATGTATATAGTTATGGTATGTTGATTCTTGAGATGTTTGGAAAAAGAAAAAATTTCAACAATAAAGAATCACATCGCAGTGAAATGTATTTTCCTGATTGGATATATGAAGATCTTGATCAAGATAATATTCTTGGTAGACACTCTGATATTTCAGATGAAGATAATGATATGATAAAGAAGATTATATTAGTAAGTTTGTGGTGTATTCAACCAAATCCATCACATAGGCCATCAATGAGTAAAGTTGTGGAGATGTTGCATGGAGAACTTGAGTCCGTGCCATTTCCTCCAAAGCCTGTGTTGTATTCTCCTGAAAGGTCTCAGTTAGAAATGTTAGATACATCTTCTAGTAGCAAGCATGAGACAATTTTAACAACCACAGAGGAAAGTAGTTCCATACATGAGATCAATAAAAATGTCTCATGTTAA 1002 0.3393 MTNSFRDKLGQGGYGTVYKASLTDDRQVAVKILSESKGSGEEFINEVASISRTSHVNIVSLLGFCYDQGKRALIYEFMPNGSLDKYIYKAKSAEAFRSLDWSVLYNIAIGIAQGLEYLHQGCTTKILHLDIKPENILLDEHFCPKISDFGLARICQKKESNVSILGTRGTPGYIAPEIFSRAYGRISDKSDVYSYGMLILEMFGKRKNFNNKESHRSEMYFPDWIYEDLDQDNILGRHSDISDEDNDMIKKIILVSLWCIQPNPSHRPSMSKVVEMLHGELESVPFPPKPVLYSPERSQLEMLDTSSSSKHETILTTTEESSSIHEINKNVSC 333
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip04g03804 333 PIRSF ILK 3 284 - -
Aip04g03804 333 SMART serkin_6 3 281 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip04g03804 333 Gene3D Phosphorylase Kinase; domain 1 1 77 - -
Aip04g03804 333 MobiDBLite consensus disorder prediction 303 333 - -
Aip04g03804 333 ProSiteProfiles Protein kinase domain profile. 3 281 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip04g03804 333 Pfam Protein kinase domain 7 275 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip04g03804 333 PANTHER TYROSINE KINASE FAMILY PROTEIN 1 314 - -
Aip04g03804 333 ProSitePatterns Serine/Threonine protein kinases active-site signature. 126 138 IPR008271 GO:0004672|GO:0006468
Aip04g03804 333 PANTHER RUST RESISTANCE KINASE LR10-RELATED 1 314 IPR045874 GO:0004672
Aip04g03804 333 CDD STKc_IRAK 9 277 - -
Aip04g03804 333 SUPERFAMILY Protein kinase-like (PK-like) 5 277 IPR011009 -
Aip04g03804 333 Gene3D Transferase(Phosphotransferase) domain 1 78 284 - -
Aip04g03804 333 ProSitePatterns Protein kinases ATP-binding region signature. 9 31 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip04g03804 Aip-Chr4 132296527 132297580 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip04g03804 1 306 Receptor kinase-like Gene Family AT5G38280 59.486 4.64e-128 379
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Aip04g03804 Pkinase 1.7e-50 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip04g03804 - - aip:107637470 664.84