Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip04g03803 ATGGCTCCCAGAATAATATTAAAATCTGAAGTTGGTTTTACCAATTTTGCTATAGTCATCTTCTTCTTGTTCATCTTGTGCGTCCACTCCGATTTGCAAGAAGCTCGAGATCCAGAAGCTGGCTACTTGTGGAAGCTTCTGAAAGCTCTGAAGCCAGCTCCCTCCAACTGGTCCGAAGACACATATGTCTGCAATTGGAATGGCGTAGAGTGCAGTAAGGAGGGCAAAGTCTACGCTCTTAAACTCTCTTCAATGTCCCTCACCGGCACAATCCCTTCAGATCTCAACAACACCCTCACCCAACTCAACCATCTTCTTCTAGACAACAACTCTCTCTCGGGGCCTCTTCCCTCTCTCGCCGGCCTCTCCACGCTCACAGAGGTTCAACTCGACAACAACAACTTCACCTCCATCCCTCATCATTGCTTTCAGGGTCTTTCCAGTTTGGAAACCCTCACTCTAAGTAACAACATCAACCTCCCACCCTGGAGTTTCCCTCTTGATTTGCTTCAGTCTTCCTCCAAACTCCAAGGCCTCCGACTGGACGCTACAAATCTTATTGGCACCTTACCGGAAGACATATGCACTTCCTTCCCAAGCTTGTACTCTCTTTTCCTCTCTAACAACAAGCTCACTGGTCCCCTGCCTCATTTTTCCAATTGCACCAACTTGGGTTATCTGGATCTTCAAGATAACTTGTTAACTGGTTTAGTTCCACCTTCCTTGATGAATCTCTCCATGATTTCAGTCCATTTGGAGAGAAACTATTTTCAGGGTCCATTGCCTGTGTTTCAATCCTCTTTTACTGATGTCAACACCAGCAATAATGGGTTCTGTTTAGACCATGCAGGGCCTTGTGATAAGCAAGTCACCACTTTGCTTCAAATTGCTGCGGATTTTGGGTATCCTCTCTTGTTGGCGAGATCTTGGCGAGGAAACAATCCATGTCAAAACTGGAGTTTTGTTGTGTGCGTAGAGAACAAGATCAGAACCCTGAATTTGACCAAACAGAATTTGACAGGGACCATTTCTCCGGCATTTACAAACTTAACTGATTTGAGGGAGTTGTATCTCAGTGGAAATAATTTGAGCGGTCCAATACCAGAGAGCTTAACAGATCTACCTCAACTTAAGATTCTTGATGTTTCCAATAACAATCTGTCAGGGAACATACCCCATTTCTCACCTGATGTCACTCTCAATACTAAGGGTAATGTTCTGCTCATCAATGCTTCTCAGCCAACCACAGTTGCTCCATCTAAAGCTCCATTCTCACTTTCCTTGATTGCAGGCTTATCAGCAGCCAGTGTTGGAATTTTGGTAACATGTGCTGCGGTTATTTATAAAAGCAAGAGGTTACAGAAAATCCTGTTCAAGAAAACAATTGTTGATCACAATGTTGAGGATTTGATACAAAGTCATGGGTTTATGGTGCAAAAACGATATAGTTATTCACAGGTAAAAAAGATGACTAATTCATTTCGTGAGGAACTAGGAAAAGGAGCCTTTGGTGTCGTATACAAAGGAAGTTTAAGTGATGGTCGTCAAGTAGCAGTGAAGATATTAAAAGAGTGTAAAACTAATGGAGAAGAATTTATAAATGAGGTTGCAAGTATTAATAGAACATCCCATGTGAATATTGTCCCATTTTTAGGATTTTGTTATGAGCCAAATAAAAGAGCATTGATTTATGAATTCATGCCAAATGGTTCTTTAGATAAATTTATTGATGAAAGGGCATCGTTTAATGCAGTATGCAAATTGGATTGGAATATACTCTATCAAGTTATAATTGGTATTGCTCGTGGGATAGAATATTTACATTGGGGATGTAGCACCAAAATTTTACATCTTGATATTAAACCTCAAAATATTCTTTTGGATGAGGAATTTGTTCCTAAAATTGCTGATTTTGGACTAGCTAAAATATGCACAAAGAAAGAGAGCATCGTATCTTTACAGTGTGCAAGAGGAACTCCAGGATATATTGCACCTGAAGTATATAATCAAATGTATGGTGGAGTTTCTCGAATTTCTCACAAATCCGATGTGTATAGTTATGGAAAGTTGATTCTTGTAGTAGTCGGAGGAAAAAAGAATTATAATAGTAAAGATTCTCGTGCCAGTGAAACATTCTTTACAGATTGGATTTATAAGGAGCTCGAACAAGATAATCTTCCAGCAAAATGCTTGATGGACATAGAGGATGAAAATAATGATTTGGTAAAAAAGATTATTTTGGTAAGCATGTGGTGTATACAAAGAAATCCTTCGGACAGACCGTCCATAAAAAGAGTGATAGAAATGTTAGAAGGATCACTTGATTCTATCCCATTTCCTCCAAAGCCAATGTGGTATTCTCCCCAAGAATCAAAGTTACAATCTCCAGATATAGCTTATGACAATACACATAAAACAGATTCTTCAACTTCAATGCAGAATGATTCCATCAATCCAAATGAATCTGCCTAA 2472 0.3964 MAPRIILKSEVGFTNFAIVIFFLFILCVHSDLQEARDPEAGYLWKLLKALKPAPSNWSEDTYVCNWNGVECSKEGKVYALKLSSMSLTGTIPSDLNNTLTQLNHLLLDNNSLSGPLPSLAGLSTLTEVQLDNNNFTSIPHHCFQGLSSLETLTLSNNINLPPWSFPLDLLQSSSKLQGLRLDATNLIGTLPEDICTSFPSLYSLFLSNNKLTGPLPHFSNCTNLGYLDLQDNLLTGLVPPSLMNLSMISVHLERNYFQGPLPVFQSSFTDVNTSNNGFCLDHAGPCDKQVTTLLQIAADFGYPLLLARSWRGNNPCQNWSFVVCVENKIRTLNLTKQNLTGTISPAFTNLTDLRELYLSGNNLSGPIPESLTDLPQLKILDVSNNNLSGNIPHFSPDVTLNTKGNVLLINASQPTTVAPSKAPFSLSLIAGLSAASVGILVTCAAVIYKSKRLQKILFKKTIVDHNVEDLIQSHGFMVQKRYSYSQVKKMTNSFREELGKGAFGVVYKGSLSDGRQVAVKILKECKTNGEEFINEVASINRTSHVNIVPFLGFCYEPNKRALIYEFMPNGSLDKFIDERASFNAVCKLDWNILYQVIIGIARGIEYLHWGCSTKILHLDIKPQNILLDEEFVPKIADFGLAKICTKKESIVSLQCARGTPGYIAPEVYNQMYGGVSRISHKSDVYSYGKLILVVVGGKKNYNSKDSRASETFFTDWIYKELEQDNLPAKCLMDIEDENNDLVKKIILVSMWCIQRNPSDRPSIKRVIEMLEGSLDSIPFPPKPMWYSPQESKLQSPDIAYDNTHKTDSSTSMQNDSINPNESA 823
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip04g03803 823 MobiDBLite consensus disorder prediction 780 823 - -
Aip04g03803 823 SUPERFAMILY Protein kinase-like (PK-like) 471 771 IPR011009 -
Aip04g03803 823 ProSitePatterns Serine/Threonine protein kinases active-site signature. 615 627 IPR008271 GO:0004672|GO:0006468
Aip04g03803 823 Gene3D Phosphorylase Kinase; domain 1 465 566 - -
Aip04g03803 823 SMART LRR_typ_2 198 220 IPR003591 -
Aip04g03803 823 SMART LRR_typ_2 374 401 IPR003591 -
Aip04g03803 823 SMART LRR_typ_2 122 145 IPR003591 -
Aip04g03803 823 SMART LRR_typ_2 350 373 IPR003591 -
Aip04g03803 823 SMART LRR_typ_2 146 167 IPR003591 -
Aip04g03803 823 Gene3D Ribonuclease Inhibitor 287 411 IPR032675 -
Aip04g03803 823 PANTHER OSJNBA0070M12.3 PROTEIN 25 216 - -
Aip04g03803 823 PANTHER OSJNBA0070M12.3 PROTEIN 208 771 - -
Aip04g03803 823 ProSiteProfiles Protein kinase domain profile. 492 774 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip04g03803 823 Pfam Leucine rich repeat 328 387 IPR001611 GO:0005515
Aip04g03803 823 Pfam Leucine rich repeat 124 159 IPR001611 GO:0005515
Aip04g03803 823 Pfam Protein kinase domain 495 768 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip04g03803 823 Gene3D Transferase(Phosphotransferase) domain 1 567 777 - -
Aip04g03803 823 SUPERFAMILY RNI-like 80 389 - -
Aip04g03803 823 Gene3D Ribonuclease Inhibitor 42 282 IPR032675 -
Aip04g03803 823 SMART serkin_6 492 770 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip04g03803 823 PANTHER RECEPTOR-LIKE KINASE TMK4 208 771 - -
Aip04g03803 823 PANTHER RECEPTOR-LIKE KINASE TMK4 25 216 - -
Aip04g03803 823 Pfam Leucine rich repeat N-terminal domain 287 324 IPR013210 -
Aip04g03803 823 Pfam Leucine rich repeat N-terminal domain 39 72 IPR013210 -
Aip04g03803 823 ProSitePatterns Protein kinases ATP-binding region signature. 498 520 IPR017441 GO:0005524
Aip04g03803 823 MobiDBLite consensus disorder prediction 788 823 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip04g03803 Aip-Chr4 132282914 132285975 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip04g03803 421 791 Receptor kinase-like Gene Family AT5G38280 52.139 1.25e-120 377
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Aip04g03803 Pkinase 5.3e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip04g03803 - - aip:107635703 1603.96