Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip04g03802 ATGGCATACCTGAAATCAAGATGCAAAAATGGAAGTATTATTATTAGTTTGTGTATGATTGTGGTGTGCATGGGTTGTGTGGAGTCTATCGATAGTGATGGTGAAGGTGCATACATGTTGAAGCTGATGAATGCACTCAAACCCCCTGCCTGGTCCAACACCACCTACATGTGCCAGTGGAGAGGCGTGAGTTGCAACCATCAAAGTGGAAGGATTAAAGAGATCGAGCTCAGATCAATGTCTCTGACGGGAACAGTTCCTGCAGGCCTCAACGACTCCCTCTCCCAACTCACGGTACTCGATCTCTCCCACAATAATCTCAGTGGCCCTGTTCCCTCTCTCGCCAACCTCTCCTTCCTCCAACTAGTGTACCTCCACAACAACAACTTCACCTCCATCCCTCATGGTTGCTTCCATGGTCTTACTACTTTGCTGTCCTTGTGGTTGACCAACAACACCAACCTCCCACCGTGGAACTTTCCTACCGATTTGACTGCTCACTCCTCCCAACTCCGTTTCCTCCACCTCTCTTCTACGAATCTCATGGGCTCCTTACCAAACATATCCCATTCCTTCCCGAGTATGAGCCGGCTTGATCTCTCTAACAACAACCTCTCCTCCATCCCTGAGGGTTGCTTCCACAACCTAACCAGTTTGTATGTCCTCTCTTTGGCCAACAACACCAACCTCCCACCATGGACCTTCCCCCTCGATTTGACTCATTCCTCATTGCAACTCTCCTACCTCTACCTCGAGGCTACAAATCTCATGGGATCCCTACCAAACTTGTCTCATTTCTTCCCAGATTTGAACGAAGTTTCACTCTCTAACAACCACCTTAGCTTCATCCCCCAAGGTTGCTTCCAAGGTCTACCCGGTTTGGTGAGTCTCAACTTGGGAAACAACACCAACCTTACACCATGGACCTTCCCCAACTTGACTCACTCCACACAACTGAAAGACCTCAATCTTACTGCTACAAATGTCATGGGCTCTCTACCAGAAATATTTCACTCCTTGCCAAGTATGGAGACTGTTCTTCTTTCCAACAACAACCTCAGCGGTGTCTTGCCAGAGTCTTTCGGAGGGACCAAGATTGCCACCTTGCATCTCAATAACCAGAAGGGTAACGGGTTTTCGGGTCCGATTGATGTCCTTTCAAACATGCTCGACTTATCTCAAGTCTGGCTTCAAGGGAACTCGTTTACAGGACCTATTCCTGACATGTCTCATTGCGCTGCTTTACAAGATTTACAACTTGGTTACAATCAATTAACAGGGGTAGTTCCAGATTCTCTAACAACACTCGATTTGCTGCAACGTATTTCTTTGAACAATAACTTTTTGCAAGGTCCTTTGCCCGAATTTGCCATTTATCCTGAGGAGAATGTGAATCTTGGTGTTAACACCACAAATGGCTTCTGTCACAAAGATCCAGGACCTTGTGATCACAAAGTGACCATTTTGCTTCAAATTGCTGCAAAATTCAACTATCCAATTCTCTTGGCCCGTACATGGAGAGGAAATAATGCCTGTAAAAACTGGAGTTTCATTACATGTGATGACAAAAACAAGATCAGAATGGTCAATTTATCAAATCTAAAATTGACGGGCACAATCTCACCTGCATTCGCCAATTTAACAGATTTGCGGAAATTGTATTTGGATGGGAATAATTTGACAGGTGAAATACCTGAAGGATTGACAACATTGCATGAACTTGAGGTTGTGAATGTCTCTAACAATCACCTTGCTGGAAATATTCCCAAATTCTCACCAAAGGTCAATTTTATTGCCACAGGCAATGATTTTCCTGTGCTTGCTTCTAATGGGCGAATCCCAACAGCTTTGATTACAGGCTTATCAGCAGCCAGTGTTGGAATTTTGATAACATGTGTGGTGGTTATTTACAAAAGCAAGAGGTTACAGAAAATCATGTTCAAGAAAACAATTGTTGATCGCAATGTTGAGGATTTGATACAAAGTTATGGGTTTATGGTGCAAAAACGATATAGTTATTCGCAGGTGAAAAGGATGACCAATTTCTTTGGTGAGAAATTAGGACAAGGAGGATTTGGTGTTGTATATAAAGGAAGTTTAAGTGACGGTCGTCACGTAGCAGTGAAGATATTGAAAGAGTCTAAAGGGAATGGAGAAGAATTTAATGGAGAAGAATTCATAAACGAGGTGGCAAGTATTAATAGCACGTCTCATGTGAATATTGTCCCATTTTTAGGATTTTGTTATGAGACAAATAAGAGAGCTTTGATTTATGAATTCATGCCAAATGGTTCTTTAGATAAATTTATTGATGAAAAAGCATCAAAATTGGATTGGAGCAGACTCTATCAAATTATAATTGGCATTGCTCGAGGATTAGAATATTTACATTGGGGATGTAGTACCAAGATTTTACATCTTGATATTAAACCTCAAAATATTCTTTTGGATGTAGATTTTTGTCCTAAAATTGCTGACTTTGGATTAGCTAAAATATGCACAAAGAAGGAGAGTATTGTATCTCTACAGTATGCAAGAGGAACAGTGGGATATGTTGCACCAGAAGTATATAATCAGATATACAGTGGAGTTTCTCGAGTTTCTCACAAATCTGATGTGTATAGTTATGGGAAGTTAATTCTTGAAGTAATTGGAGGAAAAGAGAATTATAATGATAAAGATACACGTACTAGTGAAATATACTTTACAGAATGGATTTACAAGGAACTGGAGCAAGATAATCTTTCAACAAGATGCTTGACAAACACAGAGAATGAAAATGATTTGGTAAAGAAGATTATTTTAGTAGGCATGTGGTGTATACAAAGAAATCCATCGGATAGACCGTCCATGAAAAGAGTGATAGAAATGTTAGAAGGACTACTTGATTCTATCCCATTTCCTCCGAAGCCAATGTGGTATTCTCCTCAAGGATCAAAGTTGCAATCTCCAGATATAGCTTATGACAATACACATGAGCCAGATTCATCAACTTCAGTGCAGAATGATTCCATCAATCCAAATGAGTTTGCCTAA 3036 0.4094 MAYLKSRCKNGSIIISLCMIVVCMGCVESIDSDGEGAYMLKLMNALKPPAWSNTTYMCQWRGVSCNHQSGRIKEIELRSMSLTGTVPAGLNDSLSQLTVLDLSHNNLSGPVPSLANLSFLQLVYLHNNNFTSIPHGCFHGLTTLLSLWLTNNTNLPPWNFPTDLTAHSSQLRFLHLSSTNLMGSLPNISHSFPSMSRLDLSNNNLSSIPEGCFHNLTSLYVLSLANNTNLPPWTFPLDLTHSSLQLSYLYLEATNLMGSLPNLSHFFPDLNEVSLSNNHLSFIPQGCFQGLPGLVSLNLGNNTNLTPWTFPNLTHSTQLKDLNLTATNVMGSLPEIFHSLPSMETVLLSNNNLSGVLPESFGGTKIATLHLNNQKGNGFSGPIDVLSNMLDLSQVWLQGNSFTGPIPDMSHCAALQDLQLGYNQLTGVVPDSLTTLDLLQRISLNNNFLQGPLPEFAIYPEENVNLGVNTTNGFCHKDPGPCDHKVTILLQIAAKFNYPILLARTWRGNNACKNWSFITCDDKNKIRMVNLSNLKLTGTISPAFANLTDLRKLYLDGNNLTGEIPEGLTTLHELEVVNVSNNHLAGNIPKFSPKVNFIATGNDFPVLASNGRIPTALITGLSAASVGILITCVVVIYKSKRLQKIMFKKTIVDRNVEDLIQSYGFMVQKRYSYSQVKRMTNFFGEKLGQGGFGVVYKGSLSDGRHVAVKILKESKGNGEEFNGEEFINEVASINSTSHVNIVPFLGFCYETNKRALIYEFMPNGSLDKFIDEKASKLDWSRLYQIIIGIARGLEYLHWGCSTKILHLDIKPQNILLDVDFCPKIADFGLAKICTKKESIVSLQYARGTVGYVAPEVYNQIYSGVSRVSHKSDVYSYGKLILEVIGGKENYNDKDTRTSEIYFTEWIYKELEQDNLSTRCLTNTENENDLVKKIILVGMWCIQRNPSDRPSMKRVIEMLEGLLDSIPFPPKPMWYSPQGSKLQSPDIAYDNTHEPDSSTSVQNDSINPNEFA 1011
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip04g03802 1011 ProSiteProfiles Protein kinase domain profile. 681 962 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip04g03802 1011 Gene3D Ribonuclease Inhibitor 153 235 IPR032675 -
Aip04g03802 1011 SMART LRR_typ_2 216 237 IPR003591 -
Aip04g03802 1011 SMART LRR_typ_2 340 363 IPR003591 -
Aip04g03802 1011 SMART LRR_typ_2 94 116 IPR003591 -
Aip04g03802 1011 SMART LRR_typ_2 547 571 IPR003591 -
Aip04g03802 1011 SMART LRR_typ_2 117 140 IPR003591 -
Aip04g03802 1011 SMART LRR_typ_2 291 312 IPR003591 -
Aip04g03802 1011 SMART LRR_typ_2 192 215 IPR003591 -
Aip04g03802 1011 SMART LRR_typ_2 267 290 IPR003591 -
Aip04g03802 1011 SUPERFAMILY RNI-like 312 590 - -
Aip04g03802 1011 CDD STKc_IRAK 687 961 - -
Aip04g03802 1011 ProSiteProfiles Leucine-rich repeat profile. 96 118 IPR001611 GO:0005515
Aip04g03802 1011 SMART serkin_6 681 962 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip04g03802 1011 ProSitePatterns Protein kinases ATP-binding region signature. 687 709 IPR017441 GO:0005524
Aip04g03802 1011 Pfam Protein kinase domain 685 956 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip04g03802 1011 MobiDBLite consensus disorder prediction 973 1011 - -
Aip04g03802 1011 MobiDBLite consensus disorder prediction 976 1011 - -
Aip04g03802 1011 Pfam Leucine rich repeat N-terminal domain 35 66 IPR013210 -
Aip04g03802 1011 Pfam Leucine rich repeat N-terminal domain 488 521 IPR013210 -
Aip04g03802 1011 Pfam Leucine rich repeat 269 325 IPR001611 GO:0005515
Aip04g03802 1011 ProSiteProfiles Leucine-rich repeat profile. 194 215 IPR001611 GO:0005515
Aip04g03802 1011 Gene3D Ribonuclease Inhibitor 236 472 IPR032675 -
Aip04g03802 1011 PANTHER OSJNBA0070M12.3 PROTEIN 26 206 - -
Aip04g03802 1011 PANTHER OSJNBA0070M12.3 PROTEIN 245 963 - -
Aip04g03802 1011 PANTHER OSJNBA0070M12.3 PROTEIN 202 280 - -
Aip04g03802 1011 Gene3D Ribonuclease Inhibitor 483 604 IPR032675 -
Aip04g03802 1011 Gene3D Ribonuclease Inhibitor 38 141 IPR032675 -
Aip04g03802 1011 Gene3D Phosphorylase Kinase; domain 1 656 760 - -
Aip04g03802 1011 SUPERFAMILY Protein kinase-like (PK-like) 661 959 IPR011009 -
Aip04g03802 1011 Gene3D Transferase(Phosphotransferase) domain 1 761 965 - -
Aip04g03802 1011 ProSitePatterns Serine/Threonine protein kinases active-site signature. 804 816 IPR008271 GO:0004672|GO:0006468
Aip04g03802 1011 SUPERFAMILY L domain-like 54 373 - -
Aip04g03802 1011 PANTHER RECEPTOR-LIKE KINASE TMK4 245 963 - -
Aip04g03802 1011 PANTHER RECEPTOR-LIKE KINASE TMK4 202 280 - -
Aip04g03802 1011 PANTHER RECEPTOR-LIKE KINASE TMK4 26 206 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip04g03802 Aip-Chr4 132272653 132277283 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip04g03802 617 977 Receptor kinase-like Gene Family AT5G38280 53.678 1.98e-118 377
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Aip04g03802 Pkinase 1.1e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip04g03802 - - aip:107637472 1415.59