Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip04g03801 ATGACCTCTGTCCTTTCTGATGAAGGAGAAGCTGCATACATGTTGAAGCTTATGAATGCACTCAAACCCCCTGGCTGGTCCAACACCACCCACATGTGCCACTGGACTGGCGTGAGTTGCAACAATCAAAGTAGAAGGATTGAAGAGATCTTTCTCAAAGAAATGTCACTGACGGGAACAGTTCCTGCAGGCCTCAACGACTCCCTCTCCCAACTCACATACCTCTATCTCTCCTACAATAACCTGGGTGGGCCTGTTCCCTCTCTCGCCAACCTCTCTTTCCTCCAAGTAGCGTACCTCGACAACAACAACTTCACCATCATCCCTCATGGTTGCTTCCATGGTCTTACTAGTTTGCAGTCCTTGCTCCTGAATAACAACACCAACCTCCCACCATGGAACTTTCCTACGGATTTGACTGCTCACTCCTCTCAACTCGATGTCCTCGATCTCTCTTCTACAAATCTCATGGGATCCGTACCCAACATATCCCATTCCTTCCCAACTCTGCGATATCTTTCTCTCTCTAACAACAACCTCTCCTCCATCCCTGAGGATTGCTTCCACAACCTAACCAGTTTGGACGTCCTCTCTTTGGCCAACAACACCAACCTCCTACCATGGACCTTCCCCCTCGATTTGACTCATTCCTCATTCAAACTCTCCTACCTCGACCTCCAGGCTACAAATCTCATGGGATTCCTACCAAACTTATCACATTTCTTCCCCGACTTGATTACCGTTTCTCTCTCCAACAACCACCTTACCTTCATCCCCCAAGGTTGCTTCCAGGCTCTACCCTATTTGGGGCTGCTGAAGTTGGGAAACAACACCAACCTCACACCATGGACCTTCCCCGACTTGATTCAGTCCACAAAAATACAAGAGCTCAATCTTGTTGCTACAAATGTCATGGGCTCTCTACCAGAAATATTTGACTCCTTGACAAGTTTGGAGACTCTTCTTCTCTCCAACAACAGCCTCACTGGTGTCTTGCCTGAGTCTTTTGGAAGGGGAACTCATTTGATGGATATATCCTTGACATGTCTCGTTGTACTGCCTTACAAGATTTACGACTTGCGCACAATCGATTTACAGGGTCCTATGCCTAACATTTTAGGAGATTCTGACAGTACGAATGTTGGAGATAACACCACCAATGCCTTTTGTCGAGACGACTATGATCCTTGTGACGAGAGAGTTACCATTTTGCTTGAAATTGCATCTGCATTTGGATATCCTTATTTGTTGGCCCGTTCATGGCGAGGAAATAATCCATGTCATAATTGGAGTTTTGTTGCATGTACTGCGACTATGATTACAACCGTGAATTTGACAAGGCAGAATTTGACAGGAACTATCTCAGATGCATTTGGTAAATTAACTCATTTGGAAAACTTGTATCTGAGTGGTAACAATTTAAACGGTTCAATACCTGAAAACTTCACATCTCTTCATCAACTCAAGAATCTCGATGTCTCCAACAACAACTTATCAGGAAAAATTCCCAATTTCTCACGTGGAGTATACCTGAATACTGAAGGTAACCCTTCGTTTGAGAGAAGAAAACCTTCGGGCAAGAGAAGAAATCCACCTGCTTGGATCAAAGGCGCAATAGCAGCAGCAGCAGGTATTGGAGGTCTTGTTTTCTTGGTTATAATAATTTGTAACCGAAAGAGGTGTCTTAGCTTGTTACAAAGGATTTTGTGGAAGAAAACAGGACCATTTATTGATAATGAATTTGAAGAATTTATGAAAACTTATGGATCTTTGATGTTAAGGAGATATAATTATTCTGAAGTGAAAAGTATGACAAACTCATTTCGTGATAAATTAGGAAAGGGAGGATATGGCATTGTATACAAAGCATATTTAAGTGATGGTTGTCTGGTAGCAGTGAAGGTATTGACCGAATCTAGCGGAAGTGGAGAGGAATTCCTGAATGAGGTAGCTAGTATTGGTAGAACTTCTCATATGAACATTGTCTCGCTTTTGGGATTTTGCTATGAAAAATATAAAAGGGCACTCATCTATGAATTCATGCCTAATGGTTCTTTGGATAAGTTTATCTACAAACAAGAATCTCCCAATGCTATTTGTAATTTGGATTGGAATACATTGTTTCAAATTACAATTGGTATTGCAGGAGGATTAGAATATTTGCACCGAGGATGTGCTACAAGAATTTTACATCTTGATATTAAACCTCAAAATATTCTGTTAGATGAAGATTTTTGTCCAAAAATTGCTGATTTTGGATTGGCAAAAATATGCAAAAAGAAAGAAAGTATTGTATCTTTACAAGGTACAAGAGGAACTCCGGGATACATTGCACCAGAAGTATTTAGCCGAACTTTTGGTAAAGTTTCTCACAAATCTGATGTGTATAGTTATGGAATGTTGATTCTTGAATTGGTGGGAGGTAGAAAGAACTACGACACCGGCGGATCACTTACCAGTGAAATGTACTTTCCAGATTGGATTTACAAGGATCTCGAGGAGCAAAATATCCTCGGACGGGGTTTGTCCACTACAGAAGAAGAAAGTGATATGATAAAGAAAATTACTTTGGTGAGTTTATGGTGCATTCAAACAAATCCATCGGATAGACCATCAATAAACAAAGCAGTAGAAATGTTAGAAGGACCACTTCAGTCAGTGCCATATCCTCCAAAACCTGTCTTATATTCTCCTCAAATGTCTATCTCACAGTTTTCACGAATCTCCTATAACAGTACATATGAGGAGGATTCTGAGATTGTTGAGGAGACTATTTCCATCAATAAAATGAGTTCAAAATTTGCAAAGTAA 2811 0.4095 MTSVLSDEGEAAYMLKLMNALKPPGWSNTTHMCHWTGVSCNNQSRRIEEIFLKEMSLTGTVPAGLNDSLSQLTYLYLSYNNLGGPVPSLANLSFLQVAYLDNNNFTIIPHGCFHGLTSLQSLLLNNNTNLPPWNFPTDLTAHSSQLDVLDLSSTNLMGSVPNISHSFPTLRYLSLSNNNLSSIPEDCFHNLTSLDVLSLANNTNLLPWTFPLDLTHSSFKLSYLDLQATNLMGFLPNLSHFFPDLITVSLSNNHLTFIPQGCFQALPYLGLLKLGNNTNLTPWTFPDLIQSTKIQELNLVATNVMGSLPEIFDSLTSLETLLLSNNSLTGVLPESFGRGTHLMDISLTCLVVLPYKIYDLRTIDLQGPMPNILGDSDSTNVGDNTTNAFCRDDYDPCDERVTILLEIASAFGYPYLLARSWRGNNPCHNWSFVACTATMITTVNLTRQNLTGTISDAFGKLTHLENLYLSGNNLNGSIPENFTSLHQLKNLDVSNNNLSGKIPNFSRGVYLNTEGNPSFERRKPSGKRRNPPAWIKGAIAAAAGIGGLVFLVIIICNRKRCLSLLQRILWKKTGPFIDNEFEEFMKTYGSLMLRRYNYSEVKSMTNSFRDKLGKGGYGIVYKAYLSDGCLVAVKVLTESSGSGEEFLNEVASIGRTSHMNIVSLLGFCYEKYKRALIYEFMPNGSLDKFIYKQESPNAICNLDWNTLFQITIGIAGGLEYLHRGCATRILHLDIKPQNILLDEDFCPKIADFGLAKICKKKESIVSLQGTRGTPGYIAPEVFSRTFGKVSHKSDVYSYGMLILELVGGRKNYDTGGSLTSEMYFPDWIYKDLEEQNILGRGLSTTEEESDMIKKITLVSLWCIQTNPSDRPSINKAVEMLEGPLQSVPYPPKPVLYSPQMSISQFSRISYNSTYEEDSEIVEETISINKMSSKFAK 936
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip04g03801 936 SMART LRR_typ_2 461 484 IPR003591 -
Aip04g03801 936 SMART LRR_typ_2 485 508 IPR003591 -
Aip04g03801 936 SMART LRR_typ_2 315 338 IPR003591 -
Aip04g03801 936 SMART LRR_typ_2 92 115 IPR003591 -
Aip04g03801 936 SMART LRR_typ_2 242 265 IPR003591 -
Aip04g03801 936 SMART LRR_typ_2 167 190 IPR003591 -
Aip04g03801 936 Gene3D Ribonuclease Inhibitor 399 523 IPR032675 -
Aip04g03801 936 Gene3D Phosphorylase Kinase; domain 1 579 680 - -
Aip04g03801 936 ProSiteProfiles Leucine-rich repeat profile. 169 190 IPR001611 GO:0005515
Aip04g03801 936 Pfam Protein kinase domain 610 878 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip04g03801 936 Pfam Leucine rich repeat N-terminal domain 10 41 IPR013210 -
Aip04g03801 936 Pfam Leucine rich repeat N-terminal domain 402 435 IPR013210 -
Aip04g03801 936 PANTHER TYROSINE KINASE FAMILY PROTEIN 7 918 - -
Aip04g03801 936 SUPERFAMILY L domain-like 401 505 - -
Aip04g03801 936 Gene3D Transferase(Phosphotransferase) domain 1 681 887 - -
Aip04g03801 936 PANTHER RUST RESISTANCE KINASE LR10-RELATED 7 918 IPR045874 GO:0004672
Aip04g03801 936 Pfam Leucine rich repeat 145 202 IPR001611 GO:0005515
Aip04g03801 936 Pfam Leucine rich repeat 441 498 IPR001611 GO:0005515
Aip04g03801 936 Gene3D Ribonuclease Inhibitor 7 140 IPR032675 -
Aip04g03801 936 SUPERFAMILY Protein kinase-like (PK-like) 585 880 IPR011009 -
Aip04g03801 936 ProSitePatterns Serine/Threonine protein kinases active-site signature. 729 741 IPR008271 GO:0004672|GO:0006468
Aip04g03801 936 Gene3D Ribonuclease Inhibitor 141 380 IPR032675 -
Aip04g03801 936 CDD STKc_IRAK 612 882 - -
Aip04g03801 936 Pfam Leucine Rich Repeat 317 337 IPR001611 GO:0005515
Aip04g03801 936 SMART LRR_bac_2 485 505 - -
Aip04g03801 936 SMART LRR_bac_2 461 481 - -
Aip04g03801 936 SMART LRR_bac_2 167 186 - -
Aip04g03801 936 SMART LRR_bac_2 69 89 - -
Aip04g03801 936 SMART LRR_bac_2 315 335 - -
Aip04g03801 936 SMART serkin_6 606 880 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip04g03801 936 SMART LRR_sd22_2 69 94 - -
Aip04g03801 936 SMART LRR_sd22_2 461 484 - -
Aip04g03801 936 SMART LRR_sd22_2 485 507 - -
Aip04g03801 936 SMART LRR_sd22_2 315 347 - -
Aip04g03801 936 ProSitePatterns Protein kinases ATP-binding region signature. 612 634 IPR017441 GO:0005524
Aip04g03801 936 SUPERFAMILY L domain-like 30 349 - -
Aip04g03801 936 ProSiteProfiles Protein kinase domain profile. 606 895 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip04g03801 Aip-Chr4 132264393 132267495 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip04g03801 592 902 Receptor kinase-like Gene Family AT5G38280 60.000 2.05e-125 393
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Aip04g03801 Pkinase 1.9e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip04g03801 - - aip:107635702 1692.17
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip04g03801 04 132264393 132267495 Aip04g03801 04 132264393 132267495 ECH