Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip04g03785 ATGGCGCTGCAGAACATTGGTGCCGCAAATAGCGATGATGCCTTCTACAGGTATAAGATGCCTAAAATGATAACCAAGATTGAGGGCAGAGGTAATGGCATCAAAACCAATATTGTCAATATGGTTGACATTGCAAAAGCGTTGGCTAGGCCGGCATCTTACACCACCAAATATTTCGGTTGTGAGCTTGGAGCACAATCGAAATTCGATGAGAAAACCGGCACTTCTCATGTTAATGGAGCACATGATACTGCAAAACTTGCGGGCCTTCTTGAGAACTTCATTAAGAAATATGTTCAATGCTACGGTTGTGGAAATCCTGAAACTGATATTTTGATTACAAAGAGTCAAATGATCCAGCTGAAATGTGCTGCTTGTGGTTTTGTGTCTGATGTGGACATGAGGGACAAGCTGACTACCTTTATCATCAAGAACCCTCCTGAAGCAAAGAAAGGATCGAAAGACAAAAAGGCCATGAGGAGAGCTGAGAAGGAGAGGATGAAGGAAGGTGAAATGGCTGATGAGGAACAGAAGAAACTGAAGAAAGAGGTTAAGAAGAAAGGCTCTTCATCATCAAAGGATGGCACTGTAAAATCTAGTAAGAAGAAAGCAGGTAGCTCTGATGAGGAACGTGTATCTCCTACACACAGTCAAATTGATGAGAAAGAGGAGGCTCGTGATGAAGATGATGGTGATGATGATGTTCAGTGGCAAACGGATACATCTATTGATGCTGCTCGTCAACGTATTCAAGAACAGTTAAGTGCTGTGACTGCTGATATGGTCATGCTCTCGACAAATGAACCAGAGAAGAAGAAGACAGAAAGCAAGGGTTCTGAGAATGGTGACACTGTGAACTATGCAACTGTGGTCAGGGAAGTGAAAGCATATTTGAAGAAAGGTGTCGCAGCGAAGGAATTGCAGTCACATATTGCTGCATTTCCTGTATCTGCTCAGGAGAAGATGAATGCACTTCTTGAAGGATTATTTGATGGTGTTGAGAAAGGGTTTGGAAAAGAAGCTACCAAGAGGAAGAATCACCTTGCTGCTGCAGTTGCTGGAGATGACGAGGGATTGCAGCTGTTATTGCTCAATGCTGTTGAGGAGTTCTGTAACAAGAAAGGTAGCAATGCATTGAAGGAGGTTGCACTTATTCTGAAAGCCCTCTATGATGTTGATTTGGTGGAGGAAGAGCACGTCGTGCATTGGTATTCAAAGGGACTGAAGGGTGATAAGAAGGACTCTCAGATATGGAAGAATGCTCAACCATTCATTGATTGGCTTCAGAATGCTGAATCAGAATCGGAGGAAGAATGA 1317 0.4305 MALQNIGAANSDDAFYRYKMPKMITKIEGRGNGIKTNIVNMVDIAKALARPASYTTKYFGCELGAQSKFDEKTGTSHVNGAHDTAKLAGLLENFIKKYVQCYGCGNPETDILITKSQMIQLKCAACGFVSDVDMRDKLTTFIIKNPPEAKKGSKDKKAMRRAEKERMKEGEMADEEQKKLKKEVKKKGSSSSKDGTVKSSKKKAGSSDEERVSPTHSQIDEKEEARDEDDGDDDVQWQTDTSIDAARQRIQEQLSAVTADMVMLSTNEPEKKKTESKGSENGDTVNYATVVREVKAYLKKGVAAKELQSHIAAFPVSAQEKMNALLEGLFDGVEKGFGKEATKRKNHLAAAVAGDDEGLQLLLLNAVEEFCNKKGSNALKEVALILKALYDVDLVEEEHVVHWYSKGLKGDKKDSQIWKNAQPFIDWLQNAESESEEE 438
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip04g03785 438 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 1 438 IPR045196 GO:0003743|GO:0006413
Aip04g03785 438 MobiDBLite consensus disorder prediction 148 223 - -
Aip04g03785 438 Gene3D - 2 104 - -
Aip04g03785 438 SMART 542_3 345 434 IPR003307 GO:0005515
Aip04g03785 438 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 5-LIKE 1 438 - -
Aip04g03785 438 Gene3D - 105 145 - -
Aip04g03785 438 SUPERFAMILY ARM repeat 286 432 IPR016024 -
Aip04g03785 438 SMART eIF2Bneu4 15 129 IPR002735 GO:0003743|GO:0006413
Aip04g03785 438 Coils Coil 159 179 - -
Aip04g03785 438 Pfam Domain found in IF2B/IF5 11 127 IPR002735 GO:0003743|GO:0006413
Aip04g03785 438 ProSiteProfiles W2 domain profile. 277 438 IPR003307 GO:0005515
Aip04g03785 438 CDD W2_eIF5 290 436 - -
Aip04g03785 438 SUPERFAMILY Zinc-binding domain of translation initiation factor 2 beta 98 133 IPR016190 GO:0003743|GO:0006413
Aip04g03785 438 MobiDBLite consensus disorder prediction 146 236 - -
Aip04g03785 438 Pfam eIF4-gamma/eIF5/eIF2-epsilon 360 438 IPR003307 GO:0005515
Aip04g03785 438 Gene3D - 280 438 - -
Aip04g03785 438 SUPERFAMILY Translation initiation factor 2 beta, aIF2beta, N-terminal domain 11 101 IPR016189 GO:0003743|GO:0006413
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip04g03785 Aip-Chr4 132095025 132097965 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip04g03785 1 431 Eukaryotic Initiation Factors Gene Family AT1G77840 62.500 0.0 518
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip04g03785 K03262 - gmx:100777906 659.062
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip04g03785 04 132095025 132097965 Aip04g03785 04 132095025 132097965 ECH