Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip04g03772 ATGGCTGATAGTGCTGTTTCCTTCCTGCTACAGAAGTTGTCACAGATTCTTGTTGATGAAGCAAAACTTATTGCAGGAGTGGAGAACAAAATCAGATACCTCACAAATGAGTTTAAGTTTATAGATATCTTCCTAAAGAGTAGTGAGGGAAAACGCAGCAGCAAGATAGTTGAAGAAGTGGTAAAGCAGATCAGAGATGTTGCCTATGAAGTTGAGGATTTGATGGACATCTATGTTGCCAACGCCGCGACACACAGAAGCAGAAACATGTTGAGCAAATTACTCTGCTGCATAAGCCATGTGATGATGCTTCATGAGGTAGATTCTGAGATAGAAAGGATCAAAGCTACTATTAATAGTATCTATCAAAACAAGGATAGATACAGCATTGGAGAAGGAGAGTTCAAGTGTAGAGATGACAATGAAGAATTGATTCGTAGAAGAAGAAGAGATGTAGAGGAAGAAGAAGTGGTTGGATTGCTTGACGACTCGAGCTTTGTCCTTAAACAGCTCATGGAAACAGGTTCATGCTGCAGTGTTGTTTCTATAACCGGTATGGGGGGATTGGGAAAGACTACACTTGCTAGAAAGATCTATAATAAGAAGGAAGTTGGAGAGGTTTTTCCTTTTCGCGCATGGGGTTATGTGTCCAATGACTATAGAGTTGAGGAGCTTCTTCTGAGCCTTCTCAAGTGCTTGCTATCCACCTCTGAATACAATGGTTTATTTGAGAAGAGGCATGATTATGATGAAGAAGAAATGAAAGAGAAAGTGAAGGAGAGTTTGAGGGGGAAGAAATATCTTGTGGTGCTGGATGACATTTGGAAAACACAAGTTTGGGATGATTTGCAAGGAGTCTTTCCAAATGACAACAATGGCAGCAGAATACTGATAACTAGTCGCGATAGAGACGTGGCTTCCTACGCCGGTACAATGCCTCCCTGCGAACTTTCCTTCTTGGATGAAGAAGAAAGTTGGCAGCTCTTTTGTAAGAAGGTGTTTCCGGCGCAGGATTGCCACTCTAATCTAAGAGGTTTAGGTAAGGAGTTAGTTGGAAGTTGTAAAGGGTTACCACTTGCAATCATAGTGATGGCAGGACTTGCCAAGAAAGGCATATCACAAAGAGAGTGGTTGAAAATCAAAGGTAATGTGAATCAACATTGTGATGATGAAAATGGGACTAGAGTTGTTGATATTCTAAAACTTAGCTATGATAGCTTGCCTCAAAGATTGAAGCCTTGTTTTTTGTATCTTGGAATCTTCCCTGAAGACTATGAGATTCTTGGCAGAGAACTAATCAAGCTGTGGATAGCTGAAGGGTTCATACAAGTAAAAGAAATCGGAAACTCAGATGTGCCAGAACCAGAAGATATTGCAGACCACTATTTAGATGAGTTGGTGGATCGTAGCTTGGTACAAGTGGCAAGCAGAAGGAGTGATGGAGGTGTGAAAACATGTCGAATCCACGACCACCTCCGTGACCTCTGCATATCAGAGGGAAAGGCTGATAAGTTCTTGGAGGTTCGCCGAGGATCAAACATCCCTCACCCTGCTGGGATAAGCAATTCTAGAAAGTTGTCCATACATTGCACAACAGATTTTTCTTGGCATACAAGAAACACAGGTAATCAATCTTGCACTCGTTCTTTGTTTTTCTTTGCTCATGGAAAGAGGGTCCAGAATCTTACACTGAAAGATTTCAAGTTGGCTCGCATAATGTATCTTACAAATGTATTAGGATGGAGAATAGTTGTTCCAATACCTAATGATTTGAAAACCATGATTCATCTAAGGTACCTGAGAATAGATTCCTGGGTTAAAAGCATCCCAGATTTTATATACAACCTCTATAACCTGGAAGTAATAGAGTTATGGAGTAAAAGCATACTAATCTTCTCTAGTAAACTATGGAAGCTTAAGAGGCTAAGACATTTGCGCGCGCGGCCATTTAGACTTGCATTACAAGGTATGTCAAGTGAAAATGGTAAAACAATGCCGAATCTGCAAACCCTCTTGCTGATTCATATTGATCCACAATTGGAATCCATGATAAGAAATGGAAGCTTTCCCAACCTGAAGAAACTTGGTTTGGTTCAATGGGGTGAAGATAATGGTGACAGATATTCAGTGCGCGAATTACAATGCTTGCAATGCCTAAAGAGTCTTGGCAAACTTAGAATATCTGGCACATCAAAGCTTTCATCAGAGGCAAGTGTTTTTCCACCAAATCTTACCAAGGTTACTTTGAATCGTGTCAGACGATTCGACTCGAGTTGCATGAGAGTTCTTGGAAAGCTTCCTAAACTCCAAATCTTGAAAATAAGGGGTCCTGAAATTGTTAGAGGATCTCATGACATTCATTTTGCCATTGAAGAGTTCCCATGCCTTCAAGTTTTTAAGATGATTTGGATGTCTCATGTGGTAACTTGGACATTAGACAAAGGAGCAATGCCTAGTCTTCAATATTTGGTCATAGACTGCTCCTATTTGAAGCAGCTTCCTCAAGAACTATGGTCCTTAGCTACTTTACAAAAAGTCCATGTTATTCAACCACATTCTGAATTGAGAAACAGTCTCCAACATGTTGTGCTCAACAATGGCTGTAAACTCATTTTCTCTTGA 2622 0.4043 MADSAVSFLLQKLSQILVDEAKLIAGVENKIRYLTNEFKFIDIFLKSSEGKRSSKIVEEVVKQIRDVAYEVEDLMDIYVANAATHRSRNMLSKLLCCISHVMMLHEVDSEIERIKATINSIYQNKDRYSIGEGEFKCRDDNEELIRRRRRDVEEEEVVGLLDDSSFVLKQLMETGSCCSVVSITGMGGLGKTTLARKIYNKKEVGEVFPFRAWGYVSNDYRVEELLLSLLKCLLSTSEYNGLFEKRHDYDEEEMKEKVKESLRGKKYLVVLDDIWKTQVWDDLQGVFPNDNNGSRILITSRDRDVASYAGTMPPCELSFLDEEESWQLFCKKVFPAQDCHSNLRGLGKELVGSCKGLPLAIIVMAGLAKKGISQREWLKIKGNVNQHCDDENGTRVVDILKLSYDSLPQRLKPCFLYLGIFPEDYEILGRELIKLWIAEGFIQVKEIGNSDVPEPEDIADHYLDELVDRSLVQVASRRSDGGVKTCRIHDHLRDLCISEGKADKFLEVRRGSNIPHPAGISNSRKLSIHCTTDFSWHTRNTGNQSCTRSLFFFAHGKRVQNLTLKDFKLARIMYLTNVLGWRIVVPIPNDLKTMIHLRYLRIDSWVKSIPDFIYNLYNLEVIELWSKSILIFSSKLWKLKRLRHLRARPFRLALQGMSSENGKTMPNLQTLLLIHIDPQLESMIRNGSFPNLKKLGLVQWGEDNGDRYSVRELQCLQCLKSLGKLRISGTSKLSSEASVFPPNLTKVTLNRVRRFDSSCMRVLGKLPKLQILKIRGPEIVRGSHDIHFAIEEFPCLQVFKMIWMSHVVTWTLDKGAMPSLQYLVIDCSYLKQLPQELWSLATLQKVHVIQPHSELRNSLQHVVLNNGCKLIFS 873
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip04g03772 873 Gene3D - 142 312 IPR027417 -
Aip04g03772 873 Gene3D - 4 122 - -
Aip04g03772 873 Gene3D - 319 408 IPR042197 -
Aip04g03772 873 Pfam NB-ARC domain 167 405 IPR002182 GO:0043531
Aip04g03772 873 CDD RX-CC_like 2 121 IPR038005 -
Aip04g03772 873 SUPERFAMILY L domain-like 489 847 - -
Aip04g03772 873 Gene3D - 409 498 IPR036388 -
Aip04g03772 873 PRINTS Disease resistance protein signature 180 195 - -
Aip04g03772 873 PRINTS Disease resistance protein signature 261 275 - -
Aip04g03772 873 PRINTS Disease resistance protein signature 354 368 - -
Aip04g03772 873 PRINTS Disease resistance protein signature 717 733 - -
Aip04g03772 873 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 143 418 IPR027417 -
Aip04g03772 873 Pfam Rx N-terminal domain 5 88 IPR041118 -
Aip04g03772 873 PANTHER - 44 869 - -
Aip04g03772 873 PANTHER DISEASE RESISTANCE PROTEIN RP 44 869 IPR044974 GO:0006952
Aip04g03772 873 Gene3D Ribonuclease Inhibitor 543 870 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip04g03772 Aip-Chr4 131993503 131996124 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip04g03772 181 495 WRKY Transcription Factor Family AT5G45050 27.273 2.51e-10 62.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip04g03772 - - gmx:100801950 801.201