Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip04g03766 ATGGCAAAAAAACATAAGGGTCGTGCAATAGGAATCGATCTAGGAACTACATACTCGTGTGTTGCAGCATGGGAAGAGCAAAATGGTCGTGCAGAGATTATTGTGAATGATCAAGGCAACAGAACAACACCTTCTTTCGTTGCCTTCACTGATTCTCACAGGTTCATTGGTGATGCTGCTAAAAATCAAGCTGCTGCAAACCCGTCTAACACCATCTTTGATGCTAAAAGGTTGATTGGCAGAAAATACAAAGATCCCACAATTGAGAATGATCTTAAGTTATGGCCATTCAAGGTTGTATCTGGTGTTGATGACAAACCAATGATTATGGTGAACTACAAAGGCAAGGAAAAGTGTCTTGCTGCTGAAGAAATCTCATCTATGATTCTCACAAAGATGAAGGAGATTGCAGAGGCCTATATGGACTCTTCTGTGAACAATGCAGTGATTACAGTCCCTGCCTATTTCAATGACTCGCAGCGAAAAGCCACCAAAGATGCCGGCATCATTGCCGGCCTTAATGTCATCAGAATCATCAACGAACCAACAGCTGCGGCTCTTGCATATGGCCTTCAAAAGAGAGGCAACTGTTCCGGAAAGCGCAATGTTTTCATATTTGATCTTGGTGGTGGTACCTTTGATGTGTCTCTAGTCACAATTGAAGGTGATAACATTGAAGTTAAGGCCACTACCGGAGACACTCATCTCGGAGGGGAAGATTTTGATAACAGAATGGTGAGTCACTTGGTACAAGAGTTCAAAAGAAAGAACGGAGTTGACATTACTGGGACTCCCAGAGCACTGAGGAGGTTGAGAAATGAATGCGAGAAAGCGAAAAGGATACTGTCACATACTAATGAGACTACAATTGAGATAGATGCTTTGTTTCAAGGCGTTGATTTTCGGTTTTCTTTAACTCGTGCTTGCTTTGAGGAACTCAACAGGGACTTGTTTGAGAAGTTCATGGAGATTGCTCAGAAGTGTCTTGATGATGCTAAGATGAAGAAAAGCAAGATACATGATGTGGTCCTTGTTGGTGGATCTTCAAGAATCCCAAAAGTGCAGAGTTTATTACACAACTTCTTTGAAGGGAAGGAGCTTTGCAAGAGTATCAACCCGGATGAAGCCGTCGCTTTTGGCGCCGCTGTCCAAGCTGCATTGTTGAGTGAAGACTACAGCTTTGTCCCACCCTTGGTTCTGGTGGATGTAACTCCTCTGTCTCTTGGTATAAAAGTAAAAGGAGATTTGATGAGTGTTGTAATTCCTAGGAATACCATCATTCCTGCAAAAAGAAGTGCTGTGTATTTTACACCTAAAGATTATATATCCACTGTTACAATAAATGTGTATGAAGGTGAAAGGACAAAAGCCAGTGACAATAATTTGCTGGGTACGTTTCCGCTTTCGGGCCTTCCTCTTGTTTTTAAAGGCCATCCTTTCAATGTTTACTTTGAACTGGATTTTGATGGTATCTTGAAGGTTCGTGCTGAGGATAAAACAACTGGTAGCAAGAATGGAATTACGATTACTAATGAGAAAGGAAGACTCTCAAATGCTGAAATTAATAGAATGGTTAAGGAAGCTGCATTGTTCAAGGAAGAGGATAAGAAGTTCAAGATGATGGTAAAAGCAAAGAATGCTTTGGACGATTATATTTACAAAATGGAGAAAGCTATGGAGGATTCTGATGTAAGTTCTAAGGTTTCGCCTTCCAAAAAGCAGAGAATCATGGCTGCATTCAGTGAGGGAAAAGCTTTGATTCAGAATGAGCATGAAACTGAAGCTTGTGTGTTTGAGAACTATCTTAGAAGATTACAGAACATTTGTCGACCAATACTGATCAACAAGAATGTTGTGATTACTGTGCCTGCTTATTTCAAGACAGCAGAATATATCACAGTCTATGATAACCAATGCTCTGTAGATGAACAAGTTTACGAGGGTGAGAGGATGAATGCCAGTGATAACAACTTTCTGGTATTCCTCCTGCTCCTCGAGGCCATCCTATTATGTATGGCAACAAAACATAAGGGTCATGCGATAGGAATCGATCTTGGAACTACATACTCGTGTGTTGCTGCATGGGAAGAACAAAATGGTCGTGCAGAGATTATTGTGAATGATCAAGGCAACAGAACTACACCTTCTTTTGTTGCCTTCACTGATTCTCAAAGGTTGATTGGTGATGCTGCTAAAAATCAAGCCGCAGCCAACCCCTCTAACACCATCTTTGATGCTAAAAGGTTGATTGGCAGAAAATACAAAGATCCTGCAATTTACAATGATCTTAAGTTATGGCCATTCAAGGTTGTATCTGGTGTTGATGACAAACCCATGATTATGGTGAACTACAAAGGCAGGGAAAAGTGTCTTGCTGCTGAAGAAATCTCATCTATGATCCTCACAAAGATGAAGGAGATTGCAGAGGCCTATTTGGAGTCTTCTGTGGACAATGCAGTGATTACAGTCCCTGCCTATTTCAATGACTCGCAGCGAAAAGCCACCAAAGATGCCGGCATCATTGCCGGCCTTAATGTCATCAGAATCATCAACGAACCAACAGCCGCGGCTCTTGCATATGGCCTTCAAAAGAGAGCCAAATGTTCCGGAAAGCGCAATGTTTTCATAGTTGATCTTGGTGGTGGTACCTTTGATGTGTCTCTAGTCACAATTGAAGGTGATAACATTGAAGTTAAGGCCACTGCCGGAGACACTCATCTGGGAGGGGAAGATTTCCATAACAGAATGATGAGTCACTTGGTACAAGAGTTCAAAAGAAAGATCAGAATGGACATTACTCGGGATCCCAGATCAATGAGGAGGTTGAGAAACGAATGTTTGAAGAACTCAACAGGGACTTGTTTGAGAAGTGCATGGAGATTTCTCAGAAGTGCCTTGATGATGCTAACATGGCCAAAAGTGATGTACATGATGTGGTCCTTGTTGGTGGATCTTCAAGGATTCCCAAAGTGCAGAGATTATTGCAGAAATTGTGAGGGGAAGGAGCTCTGTAAGAGTATCAACCCGGATGAAGCAGTTGCTTATGGTGCTGCAGTTCAAGCTGCTTTGTTGAGTGAAAGTTATAGCATTGTACCAAACTTGGTTCTGGTGGATGTCACTCCTCTGTCTCTTGGTATATCAACACAAGGAGATTTGATGAGTGTTGTAATTCCTCGGAATACCGTCATTCCAGCAAGTATAAGTGCTGTATATCTAACAACTAAAGATGATCAATCATCTGCTTCAATTATGGTGTATGAGGGTGAAAGGACAAAAGCCAGTGAAAATAACTTGCTTGGTAAGTTTAAGCTTTTGGGGCTTCCACTTGTTCCTCAAGATCATCCTATCAATGTTAAGTTTAAACTGGACCTTAATGGTATCTTAAAAGTTTGTGCTGAGGATGAAACAACTGGTAGGAAGAATGGAATCACCATTACTAATGAAAAAGGAAGACTCTCAAGTGCTGAAATTAAGAGAATGATTGAGGAAGCTGTGTTGTTCAAGGAAGAGGATATGAAGTTCAAGAAGATGGTGGAAGCAAAGAATACTTTGGATGAATATATTTACTGCATGGAGAAAGCTATGAAGGATTTAGATTTCAGCTCTAAGGTAATTATGGCTGCATTAAGAGAGGGAAAAAGATTGCTTCAGAGTGAGCATGAAACTGAGGCTTCTGTGTTTAAGAACTATCTTAAAAAGTTGCAGAATATTTGA 3714 0.4101 MAKKHKGRAIGIDLGTTYSCVAAWEEQNGRAEIIVNDQGNRTTPSFVAFTDSHRFIGDAAKNQAAANPSNTIFDAKRLIGRKYKDPTIENDLKLWPFKVVSGVDDKPMIMVNYKGKEKCLAAEEISSMILTKMKEIAEAYMDSSVNNAVITVPAYFNDSQRKATKDAGIIAGLNVIRIINEPTAAALAYGLQKRGNCSGKRNVFIFDLGGGTFDVSLVTIEGDNIEVKATTGDTHLGGEDFDNRMVSHLVQEFKRKNGVDITGTPRALRRLRNECEKAKRILSHTNETTIEIDALFQGVDFRFSLTRACFEELNRDLFEKFMEIAQKCLDDAKMKKSKIHDVVLVGGSSRIPKVQSLLHNFFEGKELCKSINPDEAVAFGAAVQAALLSEDYSFVPPLVLVDVTPLSLGIKVKGDLMSVVIPRNTIIPAKRSAVYFTPKDYISTVTINVYEGERTKASDNNLLGTFPLSGLPLVFKGHPFNVYFELDFDGILKVRAEDKTTGSKNGITITNEKGRLSNAEINRMVKEAALFKEEDKKFKMMVKAKNALDDYIYKMEKAMEDSDVSSKVSPSKKQRIMAAFSEGKALIQNEHETEACVFENYLRRLQNICRPILINKNVVITVPAYFKTAEYITVYDNQCSVDEQVYEGERMNASDNNFLVFLLLLEAILLCMATKHKGHAIGIDLGTTYSCVAAWEEQNGRAEIIVNDQGNRTTPSFVAFTDSQRLIGDAAKNQAAANPSNTIFDAKRLIGRKYKDPAIYNDLKLWPFKVVSGVDDKPMIMVNYKGREKCLAAEEISSMILTKMKEIAEAYLESSVDNAVITVPAYFNDSQRKATKDAGIIAGLNVIRIINEPTAAALAYGLQKRAKCSGKRNVFIVDLGGGTFDVSLVTIEGDNIEVKATAGDTHLGGEDFHNRMMSHLVQEFKRKIRMDITRDPRSMRRLRNECLKNSTGTCLRSAWRFLRSALMMLTWPKVMYMMWSLLVDLQGFPKCRDYCRNCEGKELCKSINPDEAVAYGAAVQAALLSESYSIVPNLVLVDVTPLSLGISTQGDLMSVVIPRNTVIPASISAVYLTTKDDQSSASIMVYEGERTKASENNLLGKFKLLGLPLVPQDHPINVKFKLDLNGILKVCAEDETTGRKNGITITNEKGRLSSAEIKRMIEEAVLFKEEDMKFKKMVEAKNTLDEYIYCMEKAMKDLDFSSKVIMAALREGKRLLQSEHETEASVFKNYLKKLQNI 1237
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip04g03766 1237 Gene3D Substrate Binding Domain Of DNAk; Chain A, domain 1 395 544 IPR029047 -
Aip04g03766 1237 ProSitePatterns Heat shock hsp70 proteins family signature 1. 12 19 IPR018181 -
Aip04g03766 1237 PANTHER HEAT SHOCK 70 KDA PROTEIN 998 1236 - -
Aip04g03766 1237 SUPERFAMILY Heat shock protein 70kD (HSP70), C-terminal subdomain 544 614 IPR029048 -
Aip04g03766 1237 Gene3D - 194 368 - -
Aip04g03766 1237 Gene3D - 671 872 - -
Aip04g03766 1237 SUPERFAMILY Actin-like ATPase domain 871 1024 IPR043129 -
Aip04g03766 1237 ProSitePatterns Heat shock hsp70 proteins family signature 2. 205 218 IPR018181 -
Aip04g03766 1237 ProSitePatterns Heat shock hsp70 proteins family signature 2. 876 889 IPR018181 -
Aip04g03766 1237 Coils Coil 268 288 - -
Aip04g03766 1237 ProSitePatterns Heat shock hsp70 proteins family signature 1. 683 690 IPR018181 -
Aip04g03766 1237 SUPERFAMILY Actin-like ATPase domain 8 193 IPR043129 -
Aip04g03766 1237 PANTHER HEAT SHOCK 70 KDA PROTEIN 675 948 - -
Aip04g03766 1237 ProSitePatterns Heat shock hsp70 proteins family signature 3. 342 356 IPR018181 -
Aip04g03766 1237 PANTHER HEAT SHOCK PROTEIN 70KDA 612 664 IPR013126 GO:0005524|GO:0140662
Aip04g03766 1237 PANTHER HEAT SHOCK PROTEIN 70KDA 675 948 IPR013126 GO:0005524|GO:0140662
Aip04g03766 1237 Gene3D - 873 953 - -
Aip04g03766 1237 PANTHER HEAT SHOCK 70 KDA PROTEIN 4 613 - -
Aip04g03766 1237 Gene3D - 10 386 - -
Aip04g03766 1237 Gene3D - 73 128 - -
Aip04g03766 1237 PANTHER HEAT SHOCK PROTEIN 70KDA 4 613 IPR013126 GO:0005524|GO:0140662
Aip04g03766 1237 SUPERFAMILY Heat shock protein 70kD (HSP70), peptide-binding domain 397 549 IPR029047 -
Aip04g03766 1237 SUPERFAMILY Heat shock protein 70kD (HSP70), peptide-binding domain 613 664 IPR029047 -
Aip04g03766 1237 Gene3D Substrate Binding Domain Of DNAk; Chain A, domain 1 1025 1203 IPR029047 -
Aip04g03766 1237 Gene3D Substrate Binding Domain Of DNAk; Chain A, domain 1 614 666 IPR029047 -
Aip04g03766 1237 Gene3D - 545 613 IPR029048 -
Aip04g03766 1237 SUPERFAMILY Actin-like ATPase domain 679 864 IPR043129 -
Aip04g03766 1237 PANTHER HEAT SHOCK PROTEIN 70KDA 998 1236 IPR013126 GO:0005524|GO:0140662
Aip04g03766 1237 SUPERFAMILY Heat shock protein 70kD (HSP70), peptide-binding domain 1032 1185 IPR029047 -
Aip04g03766 1237 SUPERFAMILY Actin-like ATPase domain 200 388 IPR043129 -
Aip04g03766 1237 PANTHER HEAT SHOCK 70 KDA PROTEIN 612 664 - -
Aip04g03766 1237 Pfam Hsp70 protein 680 948 IPR013126 GO:0005524|GO:0140662
Aip04g03766 1237 Pfam Hsp70 protein 989 1235 IPR013126 GO:0005524|GO:0140662
Aip04g03766 1237 Pfam Hsp70 protein 9 610 IPR013126 GO:0005524|GO:0140662
Aip04g03766 1237 PRINTS 70kDa heat shock protein signature 8 21 - -
Aip04g03766 1237 PRINTS 70kDa heat shock protein signature 371 391 - -
Aip04g03766 1237 PRINTS 70kDa heat shock protein signature 477 493 - -
Aip04g03766 1237 PRINTS 70kDa heat shock protein signature 38 50 - -
Aip04g03766 1237 PRINTS 70kDa heat shock protein signature 397 416 - -
Aip04g03766 1237 PRINTS 70kDa heat shock protein signature 60 68 - -
Aip04g03766 1237 PRINTS 70kDa heat shock protein signature 148 168 - -
Aip04g03766 1237 PRINTS 70kDa heat shock protein signature 211 221 - -
Aip04g03766 1237 PRINTS 70kDa heat shock protein signature 339 355 - -
Aip04g03766 1237 Gene3D Actin; Chain A, domain 4 237 320 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip04g03766 Aip-Chr4 131924623 131933315 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip04g03766 1 613 Calmodulin-binding Proteins AT3G12580 63.577 0.0 795
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip04g03766 K03283 - gmx:102667578 782.711