Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip04g03760 ATGGCGAGTGTGAAAGTCATTTCAACAAGTACAATCCATGCAGCAAACAAAGCTTCAACGGTGGAGGAGGAGATTCAGTTAACTCCATGGGATCTCCAACTCCTCCTAATTGATCCCATTCAAAAGGGCCTCCTCTACCGTAACGACCCGGTCACTCCACCGATCATAATCCAACACCTCAAACATTCCCTTTCATCCACCCTTTCTTTCTTCCCACCGCTTGCGGGCCGCCTTTCCGTTACGGAACACGACGACAACACTTCCTCCGTTTTCGTTATTTGCAACAACTCCGGAGCGCTGTTTGTCCATGCAGTTGCGGATGACTACTCCGTTAACGATATCGTTAGTTCCGTTTACACTCCACGCTTTGTGCACTCTTTGTTCCCGCTCAACAGGGTTAGAAACCACGAAGGAACAACCAAGCCGTTGTTGGCGGTTCAAGTCACGGAGCTCAACGACGGTTACTTCATCGGGTGCACCATGAACCACATTGTTGGAGACGGAACTTCCTTTTGGCATTTCATGAACTCTTGGGCTGAGATCTCACGTGGTTCGGAAAAATTGTCCAAGCCTCCCGTGCTTGAACGCTGGTTCCTTGACAGCGGCGGCCATGGCTGCTCCGCTTCTGCCATACGGATTCCTTTGACGAAGGAGAAGATGATTCAAAGTGGTTTCTACGGTTTCGTCTCAGAAATGCAACGCGAGAGAGTTTTCCATTTCAGTAAAGACAAGATCGCTGAACTCAAGACAAAAGCCAACGCAGAAATTGAAGGCGAAAGCAAAAACAAAATATCTTCGTTGCAAGCGCTTTTGACTCACCTGTGGAGATCCGTGGTTCGGAACCGGGGTCTTGAGCCCGAAGAAGAGGTGAATTACAGGTTGCTGATAGGTGGTAGGGGGAGAATGAAGAGTCCGGCATTGGCGGAAAACTATTTTGGGAATGCGGTGCAGGATGGAACAGTGAGCATGAAGGTTAAAGAGCTTCTAGAAGGAGGGCTTGGAAAGGGTGCGTTGGAGATGAGAAAGATAGTTGAGTTGCACACCGAGGAGAAGATGAAGAGTTATTATAGGGGTTGGGTAAAGAACCCTAGGTTTCTGACCGAGGGAGGCATGGCTAGCAATGCTTTAGTGACAAGCAGTTCGCCAAGGTTTGATGTTTATGGGAATGATTTCGGGTGGGGGAAACCGGTGGCGGTGAGAAGCGGAGCCGGGAACAAGAGCCATGGTAAGATAACGGTTTTTGCTGGGGCGGAAGATGGTGTTGACATTGAGGTTTGTCTTTCCTATGAGATATTGGAAGCTATGGGGAATGACCATGAATTCATGGATGCCGTGTCGCTCCCGTTaattatctaa 1356 0.4882 MASVKVISTSTIHAANKASTVEEEIQLTPWDLQLLLIDPIQKGLLYRNDPVTPPIIIQHLKHSLSSTLSFFPPLAGRLSVTEHDDNTSSVFVICNNSGALFVHAVADDYSVNDIVSSVYTPRFVHSLFPLNRVRNHEGTTKPLLAVQVTELNDGYFIGCTMNHIVGDGTSFWHFMNSWAEISRGSEKLSKPPVLERWFLDSGGHGCSASAIRIPLTKEKMIQSGFYGFVSEMQRERVFHFSKDKIAELKTKANAEIEGESKNKISSLQALLTHLWRSVVRNRGLEPEEEVNYRLLIGGRGRMKSPALAENYFGNAVQDGTVSMKVKELLEGGLGKGALEMRKIVELHTEEKMKSYYRGWVKNPRFLTEGGMASNALVTSSSPRFDVYGNDFGWGKPVAVRSGAGNKSHGKITVFAGAEDGVDIEVCLSYEILEAMGNDHEFMDAVSLPLII 451
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip04g03760 451 Gene3D - 229 436 IPR023213 -
Aip04g03760 451 PANTHER FAMILY REGULATORY PROTEIN, PUTATIVE (AFU_ORTHOLOGUE AFUA_3G14730)-RELATED 3 444 - -
Aip04g03760 451 PANTHER ANTHRANILATE N-HYDROXYCINNAMOYL/BENZOYLTRANSFERASE-LIKE PROTEIN 3 444 - -
Aip04g03760 451 Pfam Transferase family 3 442 - -
Aip04g03760 451 Gene3D - 1 211 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip04g03760 Aip-Chr4 131879827 131881182 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip04g03760 58 402 Monolignol Biosynthesis Gene Families AT5G48930 29.722 4.32e-30 119
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip04g03760 - - pvy:116114536 501.901