Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip04g03758 ATGGCCAAAAAATGTGAGGGACATGCAGTGGGAATAGACCTTGGAACAACATATTCTTGTGTTGCAGTGTGGAAGGAACAACATTCTCGAGCTGAGGTCATACCCAATGACCAAGGCAACAGGACAACTCCTTCTTACGTTGCTTTCACTCATAATCAAAGGTTGATTGGTGATGCTGCTAAGAACCAAGCTGCTATCAACTCTACCAACACTGTCTTTGAGATGATTGGCAGAAAATTTAGTGACCCCAATATTCAGAAAGACAAACTTTTGTGGCCATTCAAAGTCATTTCCGGTGTTGATGACCAACCAACAATTGTTGTACAGCACAAGGGTCAAAAGAAACGCCTTCGTGCCGAGGAAGTCTCGGCTATGATTCTTACTAAGATGCGCAAGATTGCAGAGGCATATTTAGAGTCACCTGTGAAGAATGCAGTTATTACTGTACCTGCATACTTCAATGACTCTCAGCGCAAAGCCACCAGAGATGCAGGCGCCATTGCCGGCCTTAATGTTATGAGGATAATCAATGAGCCTACTGCTGCAGCTATTGCTTATGGCCTTGACAAAAGATCAAACTGTGTCGGGAAAAGGAACATTTTTGTCTTTGACTTTGGTGGTGGTACATTTGATGTATCACTGCTTACCATCAAAGATAAGGCCTTCCAAATGAAGGCGACAGCTGGAAATACTCATCTGGGTGGAGTAGACTTTGACAACAGATTGTTAAATTACTTTATGGAGGAGTTCAACAAGAAGAACAATCTGGACATAAGTGGGAATTCAAGGGCCTTGAGGAGGTTGAGAAATGCAAGTGAAAGGGCCAAAAGAGTACTTTCTTACAATGTCGATGCCTTCATCCAAATAGACGGTTTATTTCAAGGCATTGACTTCTGTTCAACAATCACTCGAGCTAGGTTTGAGGAACTCAACATGGATCTCTTTAAAGAGTGCATAGATACTGTAAATAAGTGTCTTACTGATGCAGACATGGACAAGAACTGTGTGGACGATGTTGTCCTTGTTGGTGGCTCGTCTAGGATTCCTAAAGTTCAGCAGCTATTGCAGGAATTCTTCGAGGGGAAGGATCAATGTAGGAGTATCAACCCTGATGAAGCTGTTGC 1124 0.4288 MAKKCEGHAVGIDLGTTYSCVAVWKEQHSRAEVIPNDQGNRTTPSYVAFTHNQRLIGDAAKNQAAINSTNTVFEMIGRKFSDPNIQKDKLLWPFKVISGVDDQPTIVVQHKGQKKRLRAEEVSAMILTKMRKIAEAYLESPVKNAVITVPAYFNDSQRKATRDAGAIAGLNVMRIINEPTAAAIAYGLDKRSNCVGKRNIFVFDFGGGTFDVSLLTIKDKAFQMKATAGNTHLGGVDFDNRLLNYFMEEFNKKNNLDISGNSRALRRLRNASERAKRVLSYNVDAFIQIDGLFQGIDFCSTITRARFEELNMDLFKECIDTVNKCLTDADMDKNCVDDVVLVGGSSRIPKVQQLLQEFFEGKDQCRSINPDEAV 374
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip04g03758 374 ProSitePatterns Heat shock hsp70 proteins family signature 3. 339 353 IPR018181 -
Aip04g03758 374 ProSitePatterns Heat shock hsp70 proteins family signature 1. 12 19 IPR018181 -
Aip04g03758 374 Gene3D Actin; Chain A, domain 4 234 317 - -
Aip04g03758 374 SUPERFAMILY Actin-like ATPase domain 197 374 IPR043129 -
Aip04g03758 374 PANTHER HEAT SHOCK PROTEIN 70KDA 4 374 IPR013126 GO:0005524|GO:0140662
Aip04g03758 374 Gene3D - 10 374 - -
Aip04g03758 374 SUPERFAMILY Actin-like ATPase domain 9 190 IPR043129 -
Aip04g03758 374 ProSitePatterns Heat shock hsp70 proteins family signature 2. 202 215 IPR018181 -
Aip04g03758 374 Gene3D - 73 125 - -
Aip04g03758 374 PRINTS 70kDa heat shock protein signature 38 50 - -
Aip04g03758 374 PRINTS 70kDa heat shock protein signature 8 21 - -
Aip04g03758 374 PRINTS 70kDa heat shock protein signature 336 352 - -
Aip04g03758 374 PRINTS 70kDa heat shock protein signature 145 165 - -
Aip04g03758 374 PRINTS 70kDa heat shock protein signature 368 374 - -
Aip04g03758 374 PRINTS 70kDa heat shock protein signature 60 68 - -
Aip04g03758 374 PRINTS 70kDa heat shock protein signature 208 218 - -
Aip04g03758 374 Pfam Hsp70 protein 9 374 IPR013126 GO:0005524|GO:0140662
Aip04g03758 374 PANTHER HEAT SHOCK 70 KDA PROTEIN 4 374 - -
Aip04g03758 374 Gene3D - 191 365 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip04g03758 Aip-Chr4 131855270 131859747 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip04g03758 1 374 Calmodulin-binding Proteins AT3G12580 70.027 0.0 566
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip04g03758 K03283 - gmx:102667572 575.859