Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip04g03739 ATGGGAGAAAAAATTGCATCATCAATAGCCATAGGAATAGACCTGGGAACAACGTATTCCTGTGTTGCAGTGTGGCGCCATGATGGAGTGGAGATCATAACCAACGACCAAGGGAACAGAATAACACCTTCTTGTGTTGCATTCAATGATACTCAAAGAATGATTGGAGATGCTGCTAAGAATCAAATTGCTGCCAACCCTACCAACACTGTCTTTGACTCAAAAAGGTTAATTGGTAGGAAGTTTAGTGAACCCCATGTCCAGAATGATATGAAACTGTGGCCATTTCAAGTTACCAATGTTGATGAAATTCCAATGATTATAGTTGAGCACAAATCTGAGAAAAAATCTTTGACTGCTGAGGAAATCTCATCAATGATCTTAGCAAAGATGCGCGAAATCGCAGAGCAATTTCTTGGAACACAAGTAACGAATGCGGTTATTACAGTTCCGGCTTATTTCAATGACTCTCAGCGCCAAGCTACCAAAGATGCCGGCCAGATCGCCGGCCTTAATGTACTGAGCATACTCAACGAGCCAAGTGCCGCAGCCATTGCTTACGGCCTCGACACTAGAGATTATTCTAATAATTTTCATGGTATCAGAACTGTCTTCGTCTTTGATTTTGGCGGTGGTACGTTGGATCTTACTCTTCTCACAATTGACAACAAAGGAAATATAACCGTCAAGATCCATGGCGGAGACACGCATCTCGGTGGACAGGATTTTGATGCCGCAATGGTTGAATTCGTTGCGAGTGAGTTTCAGAGAAAGAAAAGGCTCGATCTTAGAGGAAACAAAAGAGCCATATGCAGGTTGAAGGTTGCTTGCGAGAGAGCGAAGAGGATTCTCTCTTCAACAACTCAAGCTTCCATTGAGCTGGAATCTCTTCATCAGGGAATCGATTTCTATACCTCAATCACTCGCGCTAAGTTTGAGGAAATCAACAAGAATCTGTTTGAGAGATGCATGGAGCTTGTGAATCAGTGTTTCGCGGATAGTAACACGGCGAAGCAGAGCGTTGATGAGGTTGTGCTGGTAGGTGGATCGACTAGGATTCCGAAACTGGAGCAGCGGTTGAAGGACTTCTTCGACGGGAAGGATCTTTGCAAGAAGTGCATCAATGCGGATGAGGCTGTTGCATATGGCGCTGCAATCCATGCTTCAAAATTGAGCGGTGACAAAAATGAAAAGATTCAAGATCTGAAGCTCTGGGAAGTTACTCCTCTGTCCCTTGGCGTGGAAGTCAGAGGTTCAATAATGAACGTTATAATTCCAAGGAACACCGTGATTCCTACAAAGAAGCAAGATTGGTTTACAACAACCGTCGACAACCAAACAATAGTCACGTTTCATATCTACGAGGGCGAGAGGAAAATTGCAAGCAACAACAACTTGCTGGGAAGTTTCGATCTGGAAGTTCCTCCGGCACCTCGCGGCGCGTCGAACATTAATGTGTGCTTTGAAGTAGATTCCAACGGTATCCTACATGTATCGGCGGAGGAAATAGCAATGGGGTGGACGAAGAAGGTCACCGTAGTGAGCAACAAAGGAAGATTGTCGAGGGAAGAAGTTGAGAGGATGGTGAAAGATGCTGAGAAGTACAAAGCTGAAGATGAAGAATACAGGCAGATGGTTTCAGGAAAGAATAAGTTGGAGGATCTTGCTTACAATATGAGGAATGTGATTGAAGAAGAACCCGTTGCTTCAGAGCTATCTGCAGAAGACAAGGAAAGGATCAACAAAGCTGTTGATTATGCACTGAAATTGGTTGATGAGACTGATTTTATAACGGTGGATGAGCTTGTCAAGGTAGAGAAAGATCTAACTGTCTTTTATACAACTATTTCGAAGATCGTTCAAGATCTTGATGCTCGTGGTAATGAAAGTGAAAGAAAAACCTTGAAGAAAGACAGATTTAAGGTAGGAGCCAGCTTTGTCAATGGGTTGATTTCTTCTGTGTGTTCTGTTATCCAAGTAATACAGAATATGTAA 1995 0.4316 MGEKIASSIAIGIDLGTTYSCVAVWRHDGVEIITNDQGNRITPSCVAFNDTQRMIGDAAKNQIAANPTNTVFDSKRLIGRKFSEPHVQNDMKLWPFQVTNVDEIPMIIVEHKSEKKSLTAEEISSMILAKMREIAEQFLGTQVTNAVITVPAYFNDSQRQATKDAGQIAGLNVLSILNEPSAAAIAYGLDTRDYSNNFHGIRTVFVFDFGGGTLDLTLLTIDNKGNITVKIHGGDTHLGGQDFDAAMVEFVASEFQRKKRLDLRGNKRAICRLKVACERAKRILSSTTQASIELESLHQGIDFYTSITRAKFEEINKNLFERCMELVNQCFADSNTAKQSVDEVVLVGGSTRIPKLEQRLKDFFDGKDLCKKCINADEAVAYGAAIHASKLSGDKNEKIQDLKLWEVTPLSLGVEVRGSIMNVIIPRNTVIPTKKQDWFTTTVDNQTIVTFHIYEGERKIASNNNLLGSFDLEVPPAPRGASNINVCFEVDSNGILHVSAEEIAMGWTKKVTVVSNKGRLSREEVERMVKDAEKYKAEDEEYRQMVSGKNKLEDLAYNMRNVIEEEPVASELSAEDKERINKAVDYALKLVDETDFITVDELVKVEKDLTVFYTTISKIVQDLDARGNESERKTLKKDRFKVGASFVNGLISSVCSVIQVIQNM 664
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip04g03739 664 Gene3D - 11 388 - -
Aip04g03739 664 Gene3D Substrate Binding Domain Of DNAk; Chain A, domain 1 396 548 IPR029047 -
Aip04g03739 664 Gene3D - 192 370 - -
Aip04g03739 664 ProSitePatterns Heat shock hsp70 proteins family signature 2. 206 219 IPR018181 -
Aip04g03739 664 PRINTS 70kDa heat shock protein signature 401 420 - -
Aip04g03739 664 PRINTS 70kDa heat shock protein signature 341 357 - -
Aip04g03739 664 PRINTS 70kDa heat shock protein signature 374 394 - -
Aip04g03739 664 PRINTS 70kDa heat shock protein signature 37 49 - -
Aip04g03739 664 PRINTS 70kDa heat shock protein signature 146 166 - -
Aip04g03739 664 PRINTS 70kDa heat shock protein signature 212 222 - -
Aip04g03739 664 PRINTS 70kDa heat shock protein signature 59 67 - -
Aip04g03739 664 PRINTS 70kDa heat shock protein signature 481 497 - -
Aip04g03739 664 PRINTS 70kDa heat shock protein signature 9 22 - -
Aip04g03739 664 SUPERFAMILY Heat shock protein 70kD (HSP70), peptide-binding domain 397 553 IPR029047 -
Aip04g03739 664 ProSitePatterns Heat shock hsp70 proteins family signature 1. 13 20 IPR018181 -
Aip04g03739 664 Gene3D - 549 642 IPR029048 -
Aip04g03739 664 PANTHER HEAT SHOCK PROTEIN 70KDA 7 627 IPR013126 GO:0005524|GO:0140662
Aip04g03739 664 PANTHER MEDIATOR OF RNA POLYMERASE II TRANSCRIPTION SUBUNIT 37C-RELATED 7 627 - -
Aip04g03739 664 SUPERFAMILY Heat shock protein 70kD (HSP70), C-terminal subdomain 549 617 IPR029048 -
Aip04g03739 664 Gene3D Actin; Chain A, domain 4 239 322 - -
Aip04g03739 664 SUPERFAMILY Actin-like ATPase domain 203 390 IPR043129 -
Aip04g03739 664 SUPERFAMILY Actin-like ATPase domain 8 190 IPR043129 -
Aip04g03739 664 Pfam Hsp70 protein 10 609 IPR013126 GO:0005524|GO:0140662
Aip04g03739 664 ProSitePatterns Heat shock hsp70 proteins family signature 3. 344 358 IPR018181 -
Aip04g03739 664 Gene3D - 72 126 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip04g03739 Aip-Chr4 131719141 131722239 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip04g03739 10 609 Calmodulin-binding Proteins AT3G12580 61.130 0.0 758
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip04g03739 K03283 - osa:4339012 727.628