Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip04g03736 atggcGGAGCTCGGCCACAATTTCGACGGCCAGACCATCGAGTGGCTCCTCTGCCAGGCTGAGCCCTCAATCATCGCCGCCACCGGAACCGGAACCACTCCCGCCAGCTTCTCCTCCGTTTCCGTCTCCGTACTCGGCGGTGCTGGCTCTCTCTCTTCTCCTTCCTCAACCTCTGCAATGTCTTCGCTCGACCACAAGCCCTTGCTCGCTCCCACTCCCTTCATACTCGGCAAGCGCATACGCACCGACAACGATGCTTCCGTCAAGGACGACGGCGTCTCCGTGGGGCCCGCCGTGGGGTCCTCAATGGGCCCCAGAGCTCCCGCAAGGCTCTGGGCCCTCCCGGCCAGGCCCGATTTCGGTCAAATTTAG 372 0.6263 MAELGHNFDGQTIEWLLCQAEPSIIAATGTGTTPASFSSVSVSVLGGAGSLSSPSSTSAMSSLDHKPLLAPTPFILGKRIRTDNDASVKDDGVSVGPAVGSSMGPRAPARLWALPARPDFGQI 123
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip04g03736 123 ProSiteProfiles TCP domain profile. 1 27 IPR017887 -
Aip04g03736 123 PANTHER TRANSCRIPTION FACTOR TCP FAMILY-RELATED 3 123 - -
Aip04g03736 123 Pfam TCP family transcription factor 3 59 IPR017887 -
Aip04g03736 123 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 3 123 IPR005333 GO:0003700
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip04g03736 Aip-Chr4 131691535 131691906 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip04g03736 3 123 TCP Transcription Factor Family AT5G23280 56.452 1.89e-36 123
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Aip04g03736 TCP 2.1e-10 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip04g03736 K16221 - aip:107646651 145.591