Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip04g03727 ATGGTGGACACTGTTGTATCCTTTGTGCTAGACAACTTGTCGCGGGTGCTTGTTAGTGAAGTGACATTGCTTTCAGGTGTGAAGGATCAAATCAAACCCCTAAGTGAAGAACTTAAGTTCATGAACATTTTCATTAAGAGTTCTGAGGGAAAACACGATGATCCCGTGGTGAGAGAAGTGGTGAACCAGATCAGAGATGTAGCATACGAAGCTGAAGACGTGATAGACACCTATGTCGTCAATGTCAACAATCAAAGAAGCAGAAACATGTTGGGAAAGTTACTCCACAGCAAAGACCATGTGATGACGCTTCATGAGGTGAATGATCGGATTACCACCATCAAGAGAAGGATCGATGATATCTATGAAAACAAGTCTAAATATGGCATCCAACAAGGTGATTTTGAAAGTCATTTTAGAAACAAAGAATTTGCAGAAGACTCATTGCTTGCAAGAAGGAGGGATGTGGAAGAAGAAGAAGTAGTTGGCTTGGTGCATGACTCCGATGAGGTGATTAACCACCTCGGTAGCAGAGGAGATTCGAGTCGTAAAGTTGTTTGCATACTAGGCATGGGTGGATTGGGAAAAACCACTCTTGCTCGAAAGATCTACAATAGCGACAAGATCAAGACCATGTTCCGTGTGTGGGGTTTTGTGTCCAATGATTACAGAGCTGAAGAACTCTTAATAAACCTTTTGAAGTGTTTGGGATTATCTGTAGAGGAGTGTAAAGATTTAAATGATCAAGAAAAAATGAAAGGAGAAGTCAGAAAACGCATGAGTGGAAAGAAATATCTGCTAGTGCTAGACGACATCTGGAAAACTCAAGTGTGGGACGAGTTGCAAGAAGCCTTTCCCGATGACGACAAGGGTAGCAGAATATTAATAACTACACGTGTTCAGGATATTTCTCACTATACAAGAGCAACCTTCACTTACAAACTCCCATTTCTTGATGAAACTCAAAGTTGGGAATTGTTTTGTAGAAAGGTATTTTGCAAAAAAAATTGTCCTCTTGAACTAGAACCTCCTGGCAAAGAAATGGCTAGTGCCTGTAAAGGTTTGCCACTTGCCATTGTTGTGTTAGCAGGTATGGTTGCCAAAAAAGAGAGGTCACCAAGAGAATGGCATAAAATCAAGAATCATGTTTCTTGGTATCTTGCTCAAGAGGAGGAATATCGAATTGTGACCAATATTCTGAAGCTTagctatgatgaccttcctcaaacattaaagccatgctttctttatttgggagtgtatcctgaagattatgaaATCCATGTGAGAACATTGTGTCAACTGTGGATAGCTGAAGGGTTCATTCAGAAAAAAGAAGTTGGACCATCGAATTCACCAGAAGTAGAAGATATTGCCGACATGTATTTAGATAAGCTGGTGGAACGGAGTTTGGTGCAAGTTGCAAGTAGGAGAACTGATGGGGGTGTGAAGACATGTAGAGTCCATGATCTTCTCCGAGACCTCTGCATTTCAGAGAGCAGCGAAAATAAGTTTATGGAAGTGTGTACGACATTAGATGCTAACAAGTGTAATCCCCGTAGGATGTCTCTCCAGTATAGAGGAAACCTGAGGCTAACCAAAGATAACCAATCATCTGCACGCTCTCTGCTTGTATTTGGTGAAAGAACTATCTGGAAGAGTAAATCAGAAGGGTGGAAACAGATAGAGAATGGTTTCAAGTTGGCTCGTGTATTGCATATGAACCTAGTGGAGCTACATTCACAACCAAGTGGATTGAAGTCATTGATCCATCTAAGGTATTTGAAACTGATAGTAGGTTCTCTAAGAATTGCAGGTGATGTTTTAACTTGTATATGCAACCTTTGCAATCTAGAAATGTTGCATCTAGAGTTTCATCGTGACTCCGATCATTTAGCTCTACCAAGCAAAATATGGAAGCTGGAGTCATTGAGGCGTATTTATTTTCGCCAACTGTATGCAAAGTGGGATTGTACTGGAGTATCAATGTTGAGTGTAGAAAATGGGGAAACAAGTATGGAGAATCTCCAGACTCTGGGTTTCATTCATCTCGATTCACAACTAGCAAGTGTCCTTAACAAGGGCATGTTTCCCAACTTGACAAAACTAAGTTTATGGCAACATCTAAATAAGTCAAATGATGAAATATTAGAGAAGATTTTGCAGTGCCTAAACAAACTCCGTACGCTAAAGGTACATAACATCAGTAGGCTTCCATTAGATCCGAATGTGTATCCCAGGAGTCTCTCCAAGATTACCATAAGACGCCACTGCGAAATAGACTCAAGATTGATCAAGACTCTGGGACAGCTTGTCAACCTGCAAATCTTGAATCTAGAGTTAGCAAGCATGCATTACGATGTTAATTGCGCGGCTGGGGACTTCCCACAGCTTCAAGTGCTACGTGTGAAACTGTACAAGAGGCTCCCTGGCAGGTGGAAAATAGAAGAAGGAGGAATGCCACATATTCGATATTGCGACCCTGAAAACCTGCTCAACCGTGATCAAGACTGA 2514 0.401 MVDTVVSFVLDNLSRVLVSEVTLLSGVKDQIKPLSEELKFMNIFIKSSEGKHDDPVVREVVNQIRDVAYEAEDVIDTYVVNVNNQRSRNMLGKLLHSKDHVMTLHEVNDRITTIKRRIDDIYENKSKYGIQQGDFESHFRNKEFAEDSLLARRRDVEEEEVVGLVHDSDEVINHLGSRGDSSRKVVCILGMGGLGKTTLARKIYNSDKIKTMFRVWGFVSNDYRAEELLINLLKCLGLSVEECKDLNDQEKMKGEVRKRMSGKKYLLVLDDIWKTQVWDELQEAFPDDDKGSRILITTRVQDISHYTRATFTYKLPFLDETQSWELFCRKVFCKKNCPLELEPPGKEMASACKGLPLAIVVLAGMVAKKERSPREWHKIKNHVSWYLAQEEEYRIVTNILKLSYDDLPQTLKPCFLYLGVYPEDYEIHVRTLCQLWIAEGFIQKKEVGPSNSPEVEDIADMYLDKLVERSLVQVASRRTDGGVKTCRVHDLLRDLCISESSENKFMEVCTTLDANKCNPRRMSLQYRGNLRLTKDNQSSARSLLVFGERTIWKSKSEGWKQIENGFKLARVLHMNLVELHSQPSGLKSLIHLRYLKLIVGSLRIAGDVLTCICNLCNLEMLHLEFHRDSDHLALPSKIWKLESLRRIYFRQLYAKWDCTGVSMLSVENGETSMENLQTLGFIHLDSQLASVLNKGMFPNLTKLSLWQHLNKSNDEILEKILQCLNKLRTLKVHNISRLPLDPNVYPRSLSKITIRRHCEIDSRLIKTLGQLVNLQILNLELASMHYDVNCAAGDFPQLQVLRVKLYKRLPGRWKIEEGGMPHIRYCDPENLLNRDQD 837
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip04g03727 837 Gene3D - 5 119 - -
Aip04g03727 837 PANTHER DISEASE RESISTANCE PROTEIN RP 42 810 IPR044974 GO:0006952
Aip04g03727 837 Pfam Rx N-terminal domain 5 88 IPR041118 -
Aip04g03727 837 CDD RX-CC_like 5 121 IPR038005 -
Aip04g03727 837 Gene3D - 144 311 IPR027417 -
Aip04g03727 837 Gene3D - 404 500 IPR036388 -
Aip04g03727 837 PANTHER - 42 810 - -
Aip04g03727 837 Pfam NB-ARC domain 168 406 IPR002182 GO:0043531
Aip04g03727 837 Gene3D - 317 403 IPR042197 -
Aip04g03727 837 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 148 418 IPR027417 -
Aip04g03727 837 PRINTS Disease resistance protein signature 185 200 - -
Aip04g03727 837 PRINTS Disease resistance protein signature 259 273 - -
Aip04g03727 837 PRINTS Disease resistance protein signature 352 366 - -
Aip04g03727 837 PRINTS Disease resistance protein signature 722 738 - -
Aip04g03727 837 SUPERFAMILY L domain-like 487 803 - -
Aip04g03727 837 Gene3D Ribonuclease Inhibitor 556 812 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip04g03727 Aip-Chr4 131616079 131620641 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip04g03727 184 495 WRKY Transcription Factor Family AT5G45050 24.843 7.55e-11 64.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip04g03727 - - aip:107635641 1184.09