Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip04g03726 ATGATTGATAGTGTTGTTAACTTTGCACTGGACAACTTGTCACGGCTGCTTGTTAGTGAAGTGACTTTGCTTTCTAGCGTAAAAGATCAAATCAGGTCCCTAAATGATGAACTGAAGTTCATGAACATCTTTATCAAGAGTTCTGAAGGAAAGCGTGAGGATCCATTTGTGAAAGAAGTGGTGAACCAAATCAGAAATGTAGCATACCAAGCTGAAGATGTAGTAGACACCTATGTCGTCAATGTCAACAATCAAAGAAGCAGAAACATGTTGGGGAAGTTCTTCCACAGCAAAGACCATGTGATGATGTTCCATGAGGTGAGTGATCAGATTAACAGCATCAAAAGAAGGATCGATGAGATTTATCAAAACAAGTCTAAATATGGCATCCAACAAGGTGATTTTGAAAGTCATAATGGAAACAAAGAATTTGCAAAAGACTCATTGATTGCGAAAAGGAGGAATGTGGAAGAAGAGGAGGTAGTAGGCTTGGTGCATGACTCTGATGAGGTGATTAACCACCTCGCCAGAAGAGGAGATTCGAGTCGTAGAgttgtttgcatattaggcatgggtggcttgggaaagaccactcttgctcgaaagatctacaacaacaagaagatcaagagCATGTTCCCGTGTCATGTGTGGGGTTTTGTGTCCAACCATTACAGAGCACAAGAATTACTACTGAGCCTTTTGAAGCTTTTGGGGTTATCCTCAGAGGAGTATAAAGATTTAAATGATAAAGAGAAAATGAAAAGAAAAGTCAGAGAATGCATGAGTGGAAAAAAATACCTGGTAATCCTAGACGACATCTGGAATATTCAAGTGTGGGACGAGTTGCAAGAAGCCTTTCCTGATGAAAACAATGGTAGTAGAATATTGATAACCACACGTATTGAAGATATCTCTCATTATACAAGAGCAATCTTCACTTACGAACTTCCATTTCTTGACGAAAGTAAAAGTTGGGAATTATTCTGTAAAAAGGTGTTTGGTAAAGAAAAATGTCCTCATGAACTTGAACTTCCTGGAAAAGAAATGGCTAATGCTTGTAAAGGTTTGCCACTTGCCATCATTGTGTTAGCCGGTATGGTTGCCAAAAAAGAGAGGTCACCAAGAGAATGGCTTAAAATCAAGAATAATGTTTCTTGGTATCTTGTTCAGGAGGAAGAATATCGAATTGTGACCAATATTCTGAAGCTTAGCTATGATGACCTTCCTCAAACATTAAAGCCATGCTTTCTTTATTTGGGAGTGTATCCTGAAGATTATGAAATCAATGTGAGAAGATTGTGTCAACTGTGGATAGCTGAAGGGTTCATTCAGAAAAAAGAAGTTGGACCATCAAATTCACCAGAAGTAGAAGATATTGCTGACATGTATTTAGATAAGCTGGTGGAACGGAGCTTGGTGCAAGTGGCAAGTAGGAGGACTGATGGGGGTGTGAAGACATGTCGAGTCCATGATCTTCTTCGTGACCTATGCATTTCAGAGAGTAGGGAAAATAAATTTATGGAAGTGTGCACAAATTTGGATGCTATCAAGTGTAATTCTCGTAGGATGTCTCTCCAGTATAGAGGAGAACTGAGGCTAACCGAAGATAACCAATCATCTGCACGCTCTCTGCTTCTGTTTGGTGAAAACACTTACTGGGAGAATGAATCAGAAGGGTGGAAACAGATAAAGAATGGCTTCAAGTTGGCTCGTGTATTGGACATGAACCAAGTGAGGCTATGTTTATCACCTCGTGGATTGACGACATTGATCCATCTAAGGTTTTTGAAAGTTACAGCATCTTCTAGAACAATTGGAGATGAAGTTTTAGCTTCTATATGCAACCTTTGGAATCTAGAAACGCTATACTTATGGATTAAACACTCTATTACTCTACCAAACAAAATATGGAAACTCAAGTCACTCAGGCATGTGTATTTAAACTGTGATGATATATTTAGAGAATTGACTCAAATAGAATCAATAATGCAGAGGATGAAAATGGAAGAAGCGACGAAGATATTTAAAGGATGGTCTGGAGGAGCATCAATGTCGAAGATGAAAATTGGAGAAACAAAGGTGGAGAATCTTCAAACACTGCATAACATCTGTCTTAATGCAAGAACAGCAAGCGTCCTAAAAAAGGGCATGTTCCCCAACTTGACAAAATTAACTTTGCGTGGAGAGGTGACAGAGCTGCCAGAGGCACCAGAAAAAGAATTCTTAGAGAACAGTTTGCAGTGCCTAAACAAACTCCGAACGCTAAAGCTACTTGGCATCGCGATACTTCCATTAGATCGGAATGCGTATCCTACAAGTCTTACCAAGATTACCATATCCTTTGGTCAACTGGATGCAAGAATAATAAAGACCCTGGGACAGCTTGCCAACCTGCAAATCTTGAAACTCGGTGGCAGAGGCATATATGGCGATGTTGATTGCGTAGCTGGTGACTTCCCACAGCTTCGAGTACTACAGTGTGGGGCTGACATGGTAGATGGCAGGTGGAAAGTAGAAAAAGGAGCAATGCCTCAGATTCGATATTGCAACATTCCTCACATCCGTGACTAA 2574 0.3877 MIDSVVNFALDNLSRLLVSEVTLLSSVKDQIRSLNDELKFMNIFIKSSEGKREDPFVKEVVNQIRNVAYQAEDVVDTYVVNVNNQRSRNMLGKFFHSKDHVMMFHEVSDQINSIKRRIDEIYQNKSKYGIQQGDFESHNGNKEFAKDSLIAKRRNVEEEEVVGLVHDSDEVINHLARRGDSSRRVVCILGMGGLGKTTLARKIYNNKKIKSMFPCHVWGFVSNHYRAQELLLSLLKLLGLSSEEYKDLNDKEKMKRKVRECMSGKKYLVILDDIWNIQVWDELQEAFPDENNGSRILITTRIEDISHYTRAIFTYELPFLDESKSWELFCKKVFGKEKCPHELELPGKEMANACKGLPLAIIVLAGMVAKKERSPREWLKIKNNVSWYLVQEEEYRIVTNILKLSYDDLPQTLKPCFLYLGVYPEDYEINVRRLCQLWIAEGFIQKKEVGPSNSPEVEDIADMYLDKLVERSLVQVASRRTDGGVKTCRVHDLLRDLCISESRENKFMEVCTNLDAIKCNSRRMSLQYRGELRLTEDNQSSARSLLLFGENTYWENESEGWKQIKNGFKLARVLDMNQVRLCLSPRGLTTLIHLRFLKVTASSRTIGDEVLASICNLWNLETLYLWIKHSITLPNKIWKLKSLRHVYLNCDDIFRELTQIESIMQRMKMEEATKIFKGWSGGASMSKMKIGETKVENLQTLHNICLNARTASVLKKGMFPNLTKLTLRGEVTELPEAPEKEFLENSLQCLNKLRTLKLLGIAILPLDRNAYPTSLTKITISFGQLDARIIKTLGQLANLQILKLGGRGIYGDVDCVAGDFPQLRVLQCGADMVDGRWKVEKGAMPQIRYCNIPHIRD 857
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip04g03726 857 SUPERFAMILY L domain-like 489 828 - -
Aip04g03726 857 PRINTS Disease resistance protein signature 185 200 - -
Aip04g03726 857 PRINTS Disease resistance protein signature 261 275 - -
Aip04g03726 857 PRINTS Disease resistance protein signature 354 368 - -
Aip04g03726 857 PRINTS Disease resistance protein signature 748 764 - -
Aip04g03726 857 CDD RX-CC_like 3 121 IPR038005 -
Aip04g03726 857 PANTHER DISEASE RESISTANCE PROTEIN RP 37 826 IPR044974 GO:0006952
Aip04g03726 857 Pfam Rx N-terminal domain 5 94 IPR041118 -
Aip04g03726 857 PANTHER - 37 826 - -
Aip04g03726 857 Gene3D - 319 405 IPR042197 -
Aip04g03726 857 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 149 420 IPR027417 -
Aip04g03726 857 Gene3D - 406 501 IPR036388 -
Aip04g03726 857 Gene3D - 5 121 - -
Aip04g03726 857 Pfam NB-ARC domain 168 408 IPR002182 GO:0043531
Aip04g03726 857 Gene3D Ribonuclease Inhibitor 538 854 IPR032675 -
Aip04g03726 857 Gene3D - 141 312 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip04g03726 Aip-Chr4 131603497 131611919 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip04g03726 184 497 WRKY Transcription Factor Family AT5G45050 26.415 1.44e-11 66.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip04g03726 - - aip:107635641 1690.24