Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip04g03725 ATGGTGGACAGTGTTGTTAGCTTTGCTTTGGACAACTTGTCGCGGTTGCTTGTTAGTGAAGTGACGTTACTATCGGGTGTGAAGGATCAAGTCAGGTCCCTATGCGATGAACTGAAGTTTATGGACATTTTCATCAAGAATTCTGAGGGAAAACGCAACGATCCATTGGTGAAAGAAGTGGTGAACCAGATCAAAGATGCAGCATATCAAGCTGAAGACGTGGTAGACACCTATGTCGTTAATGCCAATAAACAAAGAAGCAGAAATATGTTGAGCAAGTGCTTCCACAGCAAAGGCCATGTGATGATGCTCCATGAGGTGAATGATCAGATCACCACCATCAAGAGAAGAATCGATGAGATCTATCAAAACAAGTCCAAATATGGCATTCAACAAGATGATTTTGAAAGTCATGCGGGAAACAAAGAATTTGCAGAAGACTCGTTGATTGCGAGAAGGAGGGATGTGGAAGAAGAGGAGGTAGTAGGTCTGGTGTATGATTCCGATGAGGTGATTAGCCAACTTGAGGGAGGAGATTCGAGTCATAGAgttgtttgcataacaggcatgggtggtttgggaaagaccactcttgctcgaaagatctacaacaacgacaagatcaagagCATGTTCCCGTGTTGTGTGTGGTGTTTTGTGTCCTACAATTACAGAGCTCAAGAATTATTAATGAGTCTTTTGAAGCTTTTGAATTTACCTGCAGAGGAGTATAAAGATTTAACTGATCAAGCAAAAATGAAAAGAAAGGTCAGAGAACGCATGAGTGGAAAGAAATACCTGGTAGTCCTAGATGACATCTGGGAAACTCAAGTGTGGAATGATTTGCAAGGAGCCTTTCCCGATGACAACAATGGTAGCAGAATATTGATAACCACACGTGTGAAGGATATTTCTCACTATACAAGAGCAACCTTTACTTACGAACTTCCATTTCTTAATGAAAGTCAAAGTTGGGAACTGTTCTGTAAAAAGGTGTTTTGCAAAGAAAAATGTCCTCACGAACTTGAAGTTCTTGGTAGAGAAATGGCTAAAGCCTGTAAAGGTTTGCCACTTGCCATCGTTGTGTTGGCAGGTATGGTTGCCAAAAAAGAGAGGTCACCAAGAGAATGGCTTAAAATCAAGAATCATGTTTCTTGGTATCTTGCTCAGGAGGAAGAATATCGAATTGTGACCAATATTCTGAAGCTTAGCTATGATGACCTTCCCCAAGCATTAAAGCCATGCTTTCTTTATTTGGGAGTGTATCCTGAAGATTATGAAATCCATGTGAGAAGATTGTGTCAACTGTGGATAGCTGAAGGGTTCATTCAGAAAAAAGAAGTTGGACCATCAAATTCACCAGAAGTAGAAGATATTGCTGACATGTATTTAGATAAGCTGGTGGAACGGAGCTTGGTGCAAGTGGCAAGTAGGAGGACTGATGGGGGTGTGAAGACATGTCGAGTCCATGATCTTCTTCGTGACCTATGCATTTCAGAGAGTAGGGAAAATAAATTTATGGAAGTGTGCACAAATTTGGATGCTATCAAGTGTAATTCTCGTAGGATGTCTCTCCAGTATAGAGGAGAACTGAGGCTAACCGAAGATAACCAATCATCTGCACGCTCTCTGCTTCTGTTTGGTGAAAGCACTTTCTGGGAGAATGAATCAGAAGGGTGGAAACAGATGTGGAATGGCTTCAAGTTGGCTCGTGTATTGGACATGAACCAAGTGAGGCTATGTTTATCACCTCGTGGATTGACGACATTGATCCATCTAAGGTTTTTGAAAGTTACAGCATCTTCTAGAAGAATTGGAGATGATGTTTTAGCTTCTATATGCAACCTTTGGAATCTAGAAACGCTATACTTATGGATTCAAGAGTCTATTACTCTACCAAACAAAATATGGAAACTCAAGTCACTCAGGCATATATACGTATGTTTAGCGCCAGCATCAATGTCAAGGATGAAAATCGGAGAAACAAAGGTGGAGAATCTTCAAACACTGCATGCAATCTTTCTTAATGCAAGAACAGCAAGCGTCCTAAACAAGGGCATGTTCCCCAACTTGACCAAATTAACTTTGTTTGGGGCGATAGAGCTGCCAGAAAAAGAATTCTTAGAGAACAGTTTGCAGTGCCTAAACAAACTCCGAACGCTAAAGCTACTTGGCATCGCGAAGCTTCCATTAGATCCGAATGCGTATCCTACAAGTCTTACCAAGATTACCATATCCTTTGCTCAGCTGGATGCAAGAATGATAAAGACCCTGGGACAGCTAGCCAACCTGCAAATCTTGAAACTCGTTGACGGAACCATAGATGGCGATGTTAATTGCGTAGCTGGTGACTTCCCACAGCTTCAAGTACTACATGTGAGGGACGTTCAACTGGATGGCAGGTGGAAAGTCGAGGAAGGAGCAATGCCTCAGATTCGATATTGCAACCCCCCTCACATCCTTGACTAA 2469 0.4046 MVDSVVSFALDNLSRLLVSEVTLLSGVKDQVRSLCDELKFMDIFIKNSEGKRNDPLVKEVVNQIKDAAYQAEDVVDTYVVNANKQRSRNMLSKCFHSKGHVMMLHEVNDQITTIKRRIDEIYQNKSKYGIQQDDFESHAGNKEFAEDSLIARRRDVEEEEVVGLVYDSDEVISQLEGGDSSHRVVCITGMGGLGKTTLARKIYNNDKIKSMFPCCVWCFVSYNYRAQELLMSLLKLLNLPAEEYKDLTDQAKMKRKVRERMSGKKYLVVLDDIWETQVWNDLQGAFPDDNNGSRILITTRVKDISHYTRATFTYELPFLNESQSWELFCKKVFCKEKCPHELEVLGREMAKACKGLPLAIVVLAGMVAKKERSPREWLKIKNHVSWYLAQEEEYRIVTNILKLSYDDLPQALKPCFLYLGVYPEDYEIHVRRLCQLWIAEGFIQKKEVGPSNSPEVEDIADMYLDKLVERSLVQVASRRTDGGVKTCRVHDLLRDLCISESRENKFMEVCTNLDAIKCNSRRMSLQYRGELRLTEDNQSSARSLLLFGESTFWENESEGWKQMWNGFKLARVLDMNQVRLCLSPRGLTTLIHLRFLKVTASSRRIGDDVLASICNLWNLETLYLWIQESITLPNKIWKLKSLRHIYVCLAPASMSRMKIGETKVENLQTLHAIFLNARTASVLNKGMFPNLTKLTLFGAIELPEKEFLENSLQCLNKLRTLKLLGIAKLPLDPNAYPTSLTKITISFAQLDARMIKTLGQLANLQILKLVDGTIDGDVNCVAGDFPQLQVLHVRDVQLDGRWKVEEGAMPQIRYCNPPHILD 822
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip04g03725 822 Gene3D - 5 119 - -
Aip04g03725 822 CDD RX-CC_like 3 121 IPR038005 -
Aip04g03725 822 PRINTS Disease resistance protein signature 184 199 - -
Aip04g03725 822 PRINTS Disease resistance protein signature 260 274 - -
Aip04g03725 822 PRINTS Disease resistance protein signature 353 367 - -
Aip04g03725 822 PRINTS Disease resistance protein signature 713 729 - -
Aip04g03725 822 Pfam NB-ARC domain 168 407 IPR002182 GO:0043531
Aip04g03725 822 PANTHER - 45 795 - -
Aip04g03725 822 Gene3D - 150 312 IPR027417 -
Aip04g03725 822 PANTHER DISEASE RESISTANCE PROTEIN RP 45 795 IPR044974 GO:0006952
Aip04g03725 822 Gene3D Ribonuclease Inhibitor 538 816 IPR032675 -
Aip04g03725 822 Gene3D - 405 500 IPR036388 -
Aip04g03725 822 Gene3D - 318 404 IPR042197 -
Aip04g03725 822 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 152 419 IPR027417 -
Aip04g03725 822 Pfam Rx N-terminal domain 5 91 IPR041118 -
Aip04g03725 822 SUPERFAMILY L domain-like 488 802 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip04g03725 Aip-Chr4 131591024 131593527 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip04g03725 183 787 WRKY Transcription Factor Family AT5G45050 23.284 3.10e-16 81.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip04g03725 - - aip:107635641 1378.23