Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip04g03723 ATGGGGGACAGTGTTGTTACTATTGCCTTGGAGAACTTGTCAGGGCTGCTTGCTAATGAATTGATATCACTTTCGGGAGTGAACGATCAAATCAGGTACCTATGCAAACAACTGGAGTTCATGAACGTTTTCATGAAGAGTACAAAGGGAATGCGCGACAATGAGTCTGTGAGAGAAGTAGTGAACAAGATCAGAGATGTGGCACACAAAGCTGAAGACATGGTAGATACTTATGTTGTCAATGCTAACAAGCAAAGAGGCAGAAACATGTTGGTGAAGTACTTCTTCCACCGAAAAAACCATGTGATTATGCTTCCTGAGGTGAATGACAAGTTTGAAGCCATCTTGAGCAGTATCCTTGAGATCCGTGAAAAGATCAATGAAAACATGTTTATATATGGCATTCAACAAAGAAACAAAGAATTTGCAAAAGACTCATTGATTGCGAGGAGGAGGGATGTGGAAGAAGAGGAGGTAGTAGGCATGGTGCGTGACTCCGATGAGGTGATTAGACAACTCGAGGGAGGAGATTTGAGTCGTGAAgttgtttgcatattaggcatgggtggtttgggaaagaccactcttgctcgaaagatctacaacaacgacaagatcaagagCATGTTCCCGTATTGTGTGTGGGGTTTTGTGTCAAATTATTACAGCGCTCAAGAGCTGTTAATGAGCATTTTGAAGCTTTTGGATCTACCAGAAGAGGAGTACAAATATTTAACCAATCCAGAGCAAATGAAAAGAAAAATCAGAGAATCCATGAGTGGAAAGAAATACCTGGTAGTCCTAGACGATATCTGGTATACTCAAGTGTGGGACGAGTTGCATGAAGCTTTTCCTCATGACAACAATGGTAGTAGAATATTGATAACCACCCGTATGGAGAATATTTCTCGCTATACAAATGCAACCTTTACTTACAGACTCTCATTCCTCGATGAAACTCAAAGTTGGGAACTGTTCTGTTACAAGGTGTTTGGCAAAGCAGGATGTCCTCTAGAACTTGAACCTGCTGGAAAAAAAATGGCTAAAGCCTGTAAAGGTTTGCCACTTGCCATTGTTGTGTTTACAGGTATGGTTGCAAAAAAAGAGAGGTCACTTAGAGAATGGAATAGAATCCAGAATCATATTTCTTGGTATCATGCTCACGAGGACTATCGAATTGTGACCGATATTCTGAAGCTTagctatgattcccttcctcgaacattgaagccatgctttctttatttgggagtgtatcctgaagattatgaaATACCAGCGAGAACATTGTGTCAACTGTGGATATCTGAAGGTTTCATTCAGGCAACAGAAGCTGGACCATCAAATTCACAAGAAGTAGAAGATATCGCCGACATGTATTTAGATAATCTTGTGGAACGGAGCCTGGTGCAAGTGGCAAGTAAGAGGAGTGATGAGGGTGTGAAGACATGTAGAGTCCATCCTCTTCTTCGCGAGATTTGCATTTCCGAGAGCAAAGAAAACAAATTTATGGAAGTATGCGAGGAGTTGGATGCCAATAGAAGCGATTCCCGTAGAGTGTCTCTCCAGTATAAAGGAGAATGCTTACCAACCACAGGTGACAAATGGCTTGCACGCTCTCTACTCTTTTTTGGTGAAGAGACTCGTTGGGAACGTGAATCACAAGGGTGGAAACAGATAAGGAATGGCTTCAACTTGGCTCGTGTATTGGACATGAACCAAGTGGTGCTAGGTTTATCACCTCGTGGTTTGAAGACATTGATCCATCTAAGGTTTTTGAAAGTTACAGCATCTTCTAGAAGAATTGGAAATGATGTTTTAGCTTCTCTATGCAACCTTTCAAGTCTAGAAACGCTATACTTATGGCTTAGAGACGAAGTTACTCTACCAAACAAAATATGGAAGCTCAAGTCACTCAGGCATGTGTATTTAAACTTTGATAATATCATATTAAGAGAATGGACTCGAAAAGAATCAATGCCGAGGATAATCAGACAAAGGGCGAAGAGATTACAAATATGGTCTAAAGGAGCATCAATGTCGGAGATGAAAATTGGAGAAACAAAGGTGGAGAATCTTCAAACACTGAATAACATCTATCTTAATGCAAGAACAGCAAGCGTCCTAAACAAGGGCATGTTCCCCAACTTGACAAAATTAACTTTGCGTAGAGAGCCGACAAAGCTGCTAGAGCCAGAAAAAGAATACTTAGAGAACAGTTTGATGTGCCTAAACAAACTCCGAAGGCTAAAGCTACTTTGCATCGCGAAGCTTCCATTAGATCCGAATGCGTATCCTATAAGTCTTACCAAGATTACCATAGGATACTTTGGTAAACTGGATGCAGGAATAATAAAGACCCTGGGACAGCTAGCCAACCTGCGAACCTTGAAACTCGTTGGCGGAAGCATAAATGGCGATGTTAATTGCGTAGCTGGTGACTTCCCACAGCTTCAGGTACTACATCTGAGTGACGTTCAACTGGCTGGCAGGTGGAAAGTAGAAGAAGGAGCAATGCCTCATATTCGATATTGCATTAACCCTCACATCCATGACTAA 2559 0.3904 MGDSVVTIALENLSGLLANELISLSGVNDQIRYLCKQLEFMNVFMKSTKGMRDNESVREVVNKIRDVAHKAEDMVDTYVVNANKQRGRNMLVKYFFHRKNHVIMLPEVNDKFEAILSSILEIREKINENMFIYGIQQRNKEFAKDSLIARRRDVEEEEVVGMVRDSDEVIRQLEGGDLSREVVCILGMGGLGKTTLARKIYNNDKIKSMFPYCVWGFVSNYYSAQELLMSILKLLDLPEEEYKYLTNPEQMKRKIRESMSGKKYLVVLDDIWYTQVWDELHEAFPHDNNGSRILITTRMENISRYTNATFTYRLSFLDETQSWELFCYKVFGKAGCPLELEPAGKKMAKACKGLPLAIVVFTGMVAKKERSLREWNRIQNHISWYHAHEDYRIVTDILKLSYDSLPRTLKPCFLYLGVYPEDYEIPARTLCQLWISEGFIQATEAGPSNSQEVEDIADMYLDNLVERSLVQVASKRSDEGVKTCRVHPLLREICISESKENKFMEVCEELDANRSDSRRVSLQYKGECLPTTGDKWLARSLLFFGEETRWERESQGWKQIRNGFNLARVLDMNQVVLGLSPRGLKTLIHLRFLKVTASSRRIGNDVLASLCNLSSLETLYLWLRDEVTLPNKIWKLKSLRHVYLNFDNIILREWTRKESMPRIIRQRAKRLQIWSKGASMSEMKIGETKVENLQTLNNIYLNARTASVLNKGMFPNLTKLTLRREPTKLLEPEKEYLENSLMCLNKLRRLKLLCIAKLPLDPNAYPISLTKITIGYFGKLDAGIIKTLGQLANLRTLKLVGGSINGDVNCVAGDFPQLQVLHLSDVQLAGRWKVEEGAMPHIRYCINPHIHD 852
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip04g03723 852 CDD RX-CC_like 2 124 IPR038005 -
Aip04g03723 852 Gene3D - 142 310 IPR027417 -
Aip04g03723 852 PANTHER DISEASE RESISTANCE PROTEIN RP 47 824 IPR044974 GO:0006952
Aip04g03723 852 SUPERFAMILY L domain-like 565 832 - -
Aip04g03723 852 PANTHER - 47 824 - -
Aip04g03723 852 Pfam Rx N-terminal domain 5 87 IPR041118 -
Aip04g03723 852 Gene3D - 316 406 IPR042197 -
Aip04g03723 852 Gene3D Ribonuclease Inhibitor 549 845 IPR032675 -
Aip04g03723 852 Gene3D - 408 496 IPR036388 -
Aip04g03723 852 Gene3D - 5 113 - -
Aip04g03723 852 PRINTS Disease resistance protein signature 182 197 - -
Aip04g03723 852 PRINTS Disease resistance protein signature 258 272 - -
Aip04g03723 852 PRINTS Disease resistance protein signature 351 365 - -
Aip04g03723 852 PRINTS Disease resistance protein signature 813 829 - -
Aip04g03723 852 Pfam NB-ARC domain 167 403 IPR002182 GO:0043531
Aip04g03723 852 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 148 416 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip04g03723 Aip-Chr4 131585017 131587575 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip04g03723 158 493 WRKY Transcription Factor Family AT5G45050 24.561 1.43e-09 60.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip04g03723 - - aip:107635641 1130.55