Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip04g03720 ATGGGAAACAAAGAACTTGCAGAAGATTCATTGATTGCGAGAAGGAGGGATGTGGAAGAAGAGGAGGTAGTAGGCTTGGTGCATGACTCCAATGAGGTGATTAGCCAACTTGAAAGAGGAGATTGGAGTCGTAGAgttgtttgcatattaggcatgggtggattgggaaagaccactcttgctcgaaagatctacaacggcgacaagatcaagagcatgtttcgctgttgtgtatggggttttgtgtCCAACGACTACAGAGCGCAAGAATTATTAATGAGTCTTTTGAAGCTTTTGGATTTACCTGCAGAGGAGTACAAAGATTTAACCGATCAAGCAAAAATGAAAAGAAAGGTCAGAGAACGCATGAGTGGAAAGAAATACCTGGTAGTTTTAGATGACATCTGGAATACTCAAGTGTGGGATGATTTGCAAGGAGCCTTTCCTGATGACAACAATGGTAGCAGAATATTGATAACCACACGTGTGAAGGATATTTCTCACTATACAAGAGCAACCTTTACTTACGAACTTCCATTTCTCAATGAAAGTCAAAGTTGGGAACTGTTCTGTAAGAAGGTGTTTTGCAAAGAAAAATGTCCTCATGAACTTGAACCTCTTGGCAGAGAAATGACTAAAGCCTGTAAAGGTTTGCCACTTGCCATCATTGTGTTAGCAGGTATGGTTGCCAAAAAAGAGAGATCACCAAGAGAATGGATTAAAATCAATAATCATGTTTCTTGGTATCTTGCTCAGGAGGAAGAATATCGAATTGTGACTAATATTTTGAAGCTTAGCTATGATGACCTTCCCCAAGCATTAAAGCCATGCTTTCTTTATTTGGGAGTGTATCCTGAAGATTATGAAATCCATGTGAGAAGATTGTGTCAACTGTGGATAGCTGAAGGGTTCATTCAGAAAAAAGAAGTTGGACCATCAAATTCACCAGAAGTAGAAGATATTGCTGACATGTATTTAGATAAGCTGGTGGAACGGAGCTTGGTGCAAGTGGCAAGTAGGAGGACTGATGGGGGTGTGAAGACATGTCGAGTCCATGATCTTCTTCGTGACCTATGCATTTCAGAGAGTAGGGAAAATAAATTTATGGAAGTGTGCACAAATTTGGATGCTATCAAGTGTAATTCTCGTAGGATGTCTCTCCAGTATAGAGGAGAACTGAGGCTAACCGAAGATAACCAATCATCTGCACGCTCTCTGCTTCTGTTTGGTGAAAGCACTTTCTGGGAGAATGAATCAGAAGGGTGGAAACAGATAAAGAAAGGCTTCAAGTTGGCTCGTGTATTGGACATGAACAGAGTGGTGCTATGTTTATCACCTCGTGGATTGAAGACATTGATCCATCTAAGGTTTTTGAAAGTCAGAGCATCTTCTGTAAGAATTGGAAATGATGTTTTAGCTTCTCTATGCAACCTTTCGAATCTAGAAACCCTATACTTAGGGATTGAAAAGCCTATTACTCTACCAAACAAAATATGGAAGCTCAAGTCACTCAGGCATGTGTATTTAGACATTGATGTTTACGTATTAACAGAAAAATTGTCTGTAGGAGCATCAATATCGAGGATGAAAATTGGAGAAACAAAGGTGAAGAATCTTCAAACACTGCGTAGCATCTATCTTAATGCAAGAACAGCAAGCGTCCTAAGCAAGGGCATGTTCCCCAACTTGACAAAATTAACTTTGTGTCGAGAGGTGACAGAGCTGCCAGAGCCACCAGAAAAAGAATTGTTAGAGAACAGTTTGCGGTGCCTAAACAAACTCCGAACGCTAAAGCTACTTGGCATTGCGAAGCTTCCATTAGATCGGGATGCGTATCCTACAAGTCTTACCAAGATTACCATAGGATACTTTCCTCCACTGGATGCAAGAATGATAAAGACCCTGGGACAGCTAGCCAACCTGCGAACCTTGAAACTCTTTCGCGGAGGCATAATTGGCGATGTTAATTGCGTAGCTGGTGACTTCCCACAGCTTCAAGTACTACATCTGACTGACGTTCAACAATATGGTAGATGGAAGGTAGACGGAGGAGCAATGCCTCAGATTCGATATTGCAACGACCCTCGCATCCTTTGA 2097 0.3906 MGNKELAEDSLIARRRDVEEEEVVGLVHDSNEVISQLERGDWSRRVVCILGMGGLGKTTLARKIYNGDKIKSMFRCCVWGFVSNDYRAQELLMSLLKLLDLPAEEYKDLTDQAKMKRKVRERMSGKKYLVVLDDIWNTQVWDDLQGAFPDDNNGSRILITTRVKDISHYTRATFTYELPFLNESQSWELFCKKVFCKEKCPHELEPLGREMTKACKGLPLAIIVLAGMVAKKERSPREWIKINNHVSWYLAQEEEYRIVTNILKLSYDDLPQALKPCFLYLGVYPEDYEIHVRRLCQLWIAEGFIQKKEVGPSNSPEVEDIADMYLDKLVERSLVQVASRRTDGGVKTCRVHDLLRDLCISESRENKFMEVCTNLDAIKCNSRRMSLQYRGELRLTEDNQSSARSLLLFGESTFWENESEGWKQIKKGFKLARVLDMNRVVLCLSPRGLKTLIHLRFLKVRASSVRIGNDVLASLCNLSNLETLYLGIEKPITLPNKIWKLKSLRHVYLDIDVYVLTEKLSVGASISRMKIGETKVKNLQTLRSIYLNARTASVLSKGMFPNLTKLTLCREVTELPEPPEKELLENSLRCLNKLRTLKLLGIAKLPLDRDAYPTSLTKITIGYFPPLDARMIKTLGQLANLRTLKLFRGGIIGDVNCVAGDFPQLQVLHLTDVQQYGRWKVDGGAMPQIRYCNDPRIL 698
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip04g03720 698 Gene3D - 180 266 IPR042197 -
Aip04g03720 698 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 15 281 IPR027417 -
Aip04g03720 698 Gene3D - 267 362 IPR036388 -
Aip04g03720 698 Gene3D - 8 174 IPR027417 -
Aip04g03720 698 PANTHER - 11 671 - -
Aip04g03720 698 PANTHER DISEASE RESISTANCE PROTEIN RP 11 671 IPR044974 GO:0006952
Aip04g03720 698 Gene3D Ribonuclease Inhibitor 411 693 IPR032675 -
Aip04g03720 698 SUPERFAMILY L domain-like 342 690 - -
Aip04g03720 698 PRINTS Disease resistance protein signature 46 61 - -
Aip04g03720 698 PRINTS Disease resistance protein signature 122 136 - -
Aip04g03720 698 PRINTS Disease resistance protein signature 215 229 - -
Aip04g03720 698 PRINTS Disease resistance protein signature 589 605 - -
Aip04g03720 698 Pfam NB-ARC domain 31 269 IPR002182 GO:0043531
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip04g03720 Aip-Chr4 131575332 131577428 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip04g03720 22 358 WRKY Transcription Factor Family AT5G45050 24.926 4.11e-15 77.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip04g03720 - - aip:107635641 1106.28