Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip04g03719 ATGATGGTTTCGAGAGGATTGTTCGGTTGGTCCCCGCCGCACGTGCAACCTCTGACGCCAGTTTCGGAGGTTTCGGAGCCGCCGGAGTCTCCGTCGCCGTACCTTGACCCTGGCGCCGAGACCTCCGCGTCGCAGCAGCAGGTGGAGGTCGATGAGGAGATTGAGGAGCCGGAGGAGGTCGAGCCTCCGCCGGCGGCGGTTCCTTTCTCGAGGCTCTTCGCCTGCGCTGACCGGTTCGACTGGTTCCTCATGGCTGCTGGTTCGGTCGCCGCCGCAGCTCACGGCGCCGCCCTCGTCGTTTACCTGCACTATTTCGCGAAGATCATACATGTGCTGGTGGAACCTAAGCACGAGCTGTTTCACAGGTTCAATGAGCTTGCTTTAACCATTGTTTATATTGCCGCGGGAGTTTTTGCAGCTGGTTGGATTGAGGTTTCTTGCTGGATTTTGACTGGAGAACGGCAGACTGCTGTCATAAGGTCAAAATATGTTCAAGTGTTACTAAATCAAGATATGAGCTTTTTTGATACTTATGGAAATAATGGAGACATTGTAAGTCAAGTTTTGAGTGATGTGCTGCTTATTCAGTCTGCCCTTAGTGAAAAAGTTGGAAATTATATTCACAATATGGCTACGTTCTTCAGTGGTCTTGTCATTGGACTCATAAATTGTTGGCAGATTGCTCTGATAACGTTAGCAACAGGTCCGTTTATTGTTGCTGCTGGAGGAATATCAAATATATTCCTCCACCGACTTGCAGAGAATATTCAAGATGCATATGCTGAAGCGGCTAGCATTGCCGAACAGGCAGTTTCGTATGTAAGGACATTGTATGCATTCACAAATGAAACATTGGCCAAGTATTCCTATGCAACATCACTGCAAGCTACTCTTAGATATGGTATATTAATAAGTCTTGTTCAAGGGCTTGGTCTTGGATTTACATATGGGCTTGCAATATGTTCTTGTGCATTGCAACTCTGGGTTGGAAGGTTCTTGGTTATACATGAAAAAGCACATGGTGGTGAAATTATAACAGCCCTGTTTGCTGTAATTCTAAGTGGCTTGGGATTGAATCAAGCAGCAACAAACTTCTACTCTTTTGATCAGGGGAGAATTGCTGCTTATAGATTATTTGAGATGATAAGCCGGTCATCCTCATCTGATGATCATGACGGCATTACTCCTGATTCTGTGCAAGGAAATATAGAGTTTCGGAATGTTTATTTCAGCTATCTGTCTCGTCCTGAAATCCCTATCTTGAGTGGATTTTATCTTAGTGTACCTGCTAAGAAAGCTGTGGCTCTTGTTGGCAGAAATGGCTCTGGGAAAAGTAGTATTATTCCACTAATGGAGCGTTTCTATGATCCTACATTAGGGGAAGTTCTTCTAGATGGAGAAAACATCAAGAACTTGAAACTTGAATGGCTTAGGAGCCAAATAGGACTAGTCACCCAGGAGCCTGCTTTGCTTAGTTTGAGTATAAGAGATAATATTGCTTATGGGAGGGATGCCACCATGGATCAAATTGAAGAGGCTGCTAAAATAGCTCATGCACATACATTTATCAGCTCATTGGAGAAAGGTTATTACACACAGGTTGGCAGGGCTGGTCTGGCTTTGACTGAAGAGCAAAAAATAAAACTTTCTATTGCTAGAGCTGTGCTTTTAAATCCATCAATTCTTCTACTTGATGAGGTTACTGGTGGTCTTGATTTTGAGGCTGAGAGGGCTGTTCAGGGGGCTTTGGACCTACTTATGTTGGGACGCTCAACAATAATAATTGCTCGACGGCTTAGTCTCATAAGGAATGCTGATTATATCGCTGTTATGGAGGAAGGTCAACTTGTTGAAATGGGTACTCATGATGAATTATTGTCCTTGGATGGCTTATATGCAGAGCTTCTTCGATGTGAAGAGGCAGCAAAACTTCCCAAGAGGATGCCTGTTCGAAATTACAAGGAGACTGCAGCGTTTCAAATTGAGAAGGATTCTTCAGCAAGTCATAGCTTCAAGGAACCATCCTCCCCTAAAATGTTGAAGTCACCTTCTCTTCAAAGAGTATCTAATGTATCCCGCCCTCCAGACGGAACCTTTAACTTGCTTGAATCTCCAAAGGCCCGGAGCCCACCACCTGAGAAGATGGTGGAAAATGGTCAGGCCCTTGATGGAGCAGATAAGGAGCCATCAATAAGAAGGCAGGATAGTTTTGAGATGAGACTTCCAGAGTTACCCAAGCTTGATGTGCAGTCTCTGCATCGTCAAAAATCAAATGGTTCTGACCCAGAATCTCCTGTTTCTCCCCTTTTAACATCTGATCCCAAGAGTGAACGCTCTCATTCGCAGACTTTTAGTAGAACGCAGAGTTACTCTGATGATCTTTCAGCTGAAAAGAGAAAATTGAAGGATACAAGGCATCAAAAACCACCATCACTTAGGAAGCTTGCTGAGCTTAGCTTCGCTGAGTGGCTTTATGCTGTGTTAGGAAGCATAGGTGCTGCTATCTTTGGTTCTTTCAATCCTCTTCTTGCTTATGTAATTGGCCTTGTGGTGACAGCTTACTATAATATTGATAAAGAACATCACTTACGATGGGAGGTAAACAAGTGGTGTTTGGCCATTGGCTGCATGGGTATTGTGACAGTAATTGCCAACTTTTTACAGCATTTCTACTTTGGTATCATGGGGGAGAAAATGACAGAAAGGGTTAGGAGAATGATGTTCTCAGCCATGCTTCGCAATGAAGTTGGGTGGTTTGATGATGAGGAAAACAGTGCTGACAATTTATCCATGCGATTGGCCAATGATGCTACTTTTGTACGAGCTGCTTTTAGCAATAGGCTGTCTATATTTATTCAGGACAGTGCTGCAATTATTGTTGGTCTTCTGATTGGTGCCTTGCTGCACTGGCGGTTAGCACTTGTGGCTTTTGCAACCCTTCCAATTCTCTGTGTTGCTGCAATTGCCCAGAAGATGTGGCTTGCTGGATTTTCAAGGGGCATACAGGAAATGCATAGAAAGGCATCTTTGGTTCTTGAAGATGCAGTTAGAAACATTTACACTGTTGTTGCATTTTGTGCTGGTAATAAGGTAATGGAACTTTATAGGCTGCAGTTGAAGAAAATATTTAGGAAGAGCTTTCTTCATGGGATGGCAATCGGTTTTGCATTTGGCTTTTCACAGTTCCTACTTTTTGCTTGTAATGCCCTTCTACTTTGGTACACTGGGAGATGTGTAAAACATGGTTATGTGCAACTATCTACTGCACTCAAGGAGTATATGGTTTTCTCATTTGCGACATTTGCGCTTGTAGAGCCTTTTGGATTGGCTCCTTACATCCTTAAACGACGGAAGTCTCTCATATCAGTGTTTGATATCATAGATCGTGTGCCTAAAATTGATCCTGATGATAGCTCAGCATTGAAGCCACCCAATGTACATGGAAGAATTGAGTTAAAAAATGTTGATTTCTGTTACCCAACTCGTCCAGAAGTTTTGGTATTGAGCAATTTTAGTCTCAAAGTCAATGGTGGGCAAACGGTTGCTATTGTGGGAGTTTCTGGGTCAGGAAAGAGCACTATTATATCTTTGATTGAGAGGGAAAACATCATATATGCAAGGCACAATGCCAGTGAAGCTGAGATGAAAGAGGCTGCAAGAATAGCAAATGCCCATCACTTTATTAGCAGCTTGCCTCATGGTTATGACACTCACGTTGGGATGCGAGGTGTTGACTTAACTCCTGGACAAAAACAGAGAATTGCAATTGCGAGGGTTGTGCTGAAAAATGCGCCTATCTTGTTGTTGGATGAAGCAAGCTCATCAATTGAATCCGAGTCAAGCCGGGTGGTGCAAGAAGCTCTAGACACACTAATAATGGGGAACAAGACCACCATTTTAATTGCGCATAGGGCTGCAATGATGAGGCATGTGGACAATATCGTAGTGCTTAATGGGGGACGGATAGTGGAGGAGGGGACTCATGATTCATTGATGGCTAAGAATGGTCTGTATGTCCGATTGATGCAACCTCATTTTGTTGAATCACTGGGGACTCTTGCACCTGATGGATTTTCCGAGAATGTCAGGTGGAAGTTGTGGGTCGACGGCCAAAATGGAGCTCGGGTTAGCACACAGCACTGTGAATTGATGGCAGTCCAAAGAATTGCAATTGGGTCTCCTGGAGAGGCTGCTCAGCCTGATGCAATTAGAGCAGCATTTGCAGAATTCTTCTCATTGCTTATTTTTGTTTTTGCTGATAAACTAACAAACAATGGACCAGCAACACCATCTGGCCTGGTAGCTGCATCATTGTCCCATGCATTTGGTCTTATTGCGGCTGTCTCTGTTGGTGCAAACGTTTCTGGTGACCATGTGAACCCTGTTACTTTTGGTAACTTCATTGGAGGAAACATAACCCTTTTGAGGAGCATTTTGTATTGGATTGCACAGTTGCTTGGTTCAGTTCTTGCTTGCATTCTTCTCAAGTTTGCTGCTGGAGGAATGGAAACAACAGGTTTCTCATTATCCTCTAGTGTGTCAGAATGGAATGCATTGGTGTTTGAAATAGTGATGACATTTGGGTTAGTGTACACAGTTTATGGCACAGCAGTGGATCCAAAGAAAGGAAATGTGGGAATTGTAGCCCCAATTGCAATTGGATTCATTGTGGGTGCAAACATCTTAGTAGGTGATGCATTTGATGGTGCATTAATGAATCCAGCAGTGTCATTTGGTCCTGCTGTTGTTAATTGGTCATGGACTCATCATTGGGTGTATTGGGTTGGCCCCTCCATTGGTGCTGCCATTGCTGCCATTATGTATGATAATATCTTCATTGGTGATGGTCAGGAACCCCTTTCAAGCAGTGACTACTAG 4878 0.4377 MMVSRGLFGWSPPHVQPLTPVSEVSEPPESPSPYLDPGAETSASQQQVEVDEEIEEPEEVEPPPAAVPFSRLFACADRFDWFLMAAGSVAAAAHGAALVVYLHYFAKIIHVLVEPKHELFHRFNELALTIVYIAAGVFAAGWIEVSCWILTGERQTAVIRSKYVQVLLNQDMSFFDTYGNNGDIVSQVLSDVLLIQSALSEKVGNYIHNMATFFSGLVIGLINCWQIALITLATGPFIVAAGGISNIFLHRLAENIQDAYAEAASIAEQAVSYVRTLYAFTNETLAKYSYATSLQATLRYGILISLVQGLGLGFTYGLAICSCALQLWVGRFLVIHEKAHGGEIITALFAVILSGLGLNQAATNFYSFDQGRIAAYRLFEMISRSSSSDDHDGITPDSVQGNIEFRNVYFSYLSRPEIPILSGFYLSVPAKKAVALVGRNGSGKSSIIPLMERFYDPTLGEVLLDGENIKNLKLEWLRSQIGLVTQEPALLSLSIRDNIAYGRDATMDQIEEAAKIAHAHTFISSLEKGYYTQVGRAGLALTEEQKIKLSIARAVLLNPSILLLDEVTGGLDFEAERAVQGALDLLMLGRSTIIIARRLSLIRNADYIAVMEEGQLVEMGTHDELLSLDGLYAELLRCEEAAKLPKRMPVRNYKETAAFQIEKDSSASHSFKEPSSPKMLKSPSLQRVSNVSRPPDGTFNLLESPKARSPPPEKMVENGQALDGADKEPSIRRQDSFEMRLPELPKLDVQSLHRQKSNGSDPESPVSPLLTSDPKSERSHSQTFSRTQSYSDDLSAEKRKLKDTRHQKPPSLRKLAELSFAEWLYAVLGSIGAAIFGSFNPLLAYVIGLVVTAYYNIDKEHHLRWEVNKWCLAIGCMGIVTVIANFLQHFYFGIMGEKMTERVRRMMFSAMLRNEVGWFDDEENSADNLSMRLANDATFVRAAFSNRLSIFIQDSAAIIVGLLIGALLHWRLALVAFATLPILCVAAIAQKMWLAGFSRGIQEMHRKASLVLEDAVRNIYTVVAFCAGNKVMELYRLQLKKIFRKSFLHGMAIGFAFGFSQFLLFACNALLLWYTGRCVKHGYVQLSTALKEYMVFSFATFALVEPFGLAPYILKRRKSLISVFDIIDRVPKIDPDDSSALKPPNVHGRIELKNVDFCYPTRPEVLVLSNFSLKVNGGQTVAIVGVSGSGKSTIISLIERENIIYARHNASEAEMKEAARIANAHHFISSLPHGYDTHVGMRGVDLTPGQKQRIAIARVVLKNAPILLLDEASSSIESESSRVVQEALDTLIMGNKTTILIAHRAAMMRHVDNIVVLNGGRIVEEGTHDSLMAKNGLYVRLMQPHFVESLGTLAPDGFSENVRWKLWVDGQNGARVSTQHCELMAVQRIAIGSPGEAAQPDAIRAAFAEFFSLLIFVFADKLTNNGPATPSGLVAASLSHAFGLIAAVSVGANVSGDHVNPVTFGNFIGGNITLLRSILYWIAQLLGSVLACILLKFAAGGMETTGFSLSSSVSEWNALVFEIVMTFGLVYTVYGTAVDPKKGNVGIVAPIAIGFIVGANILVGDAFDGALMNPAVSFGPAVVNWSWTHHWVYWVGPSIGAAIAAIMYDNIFIGDGQEPLSSSDY 1625
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip04g03719 1625 MobiDBLite consensus disorder prediction 792 808 - -
Aip04g03719 1625 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1139 1344 IPR027417 -
Aip04g03719 1625 PANTHER ABC TRANSPORTER B FAMILY MEMBER 20-RELATED 19 1200 - -
Aip04g03719 1625 MobiDBLite consensus disorder prediction 664 729 - -
Aip04g03719 1625 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 392 637 IPR027417 -
Aip04g03719 1625 Pfam ABC transporter transmembrane region 832 1096 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Aip04g03719 1625 Pfam ABC transporter transmembrane region 88 353 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Aip04g03719 1625 SUPERFAMILY ABC transporter transmembrane region 70 378 IPR036640 GO:0005524|GO:0016021
Aip04g03719 1625 SUPERFAMILY Aquaporin-like 1399 1615 IPR023271 -
Aip04g03719 1625 Gene3D - 1205 1346 IPR027417 -
Aip04g03719 1625 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 827 1119 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Aip04g03719 1625 PANTHER ABC TRANSPORTER B FAMILY 1200 1352 - -
Aip04g03719 1625 SMART AAA_5 1177 1321 IPR003593 -
Aip04g03719 1625 SMART AAA_5 430 609 IPR003593 -
Aip04g03719 1625 Coils Coil 249 269 - -
Aip04g03719 1625 Pfam Major intrinsic protein 1398 1608 IPR000425 GO:0015267|GO:0016020|GO:0055085
Aip04g03719 1625 Pfam ABC transporter 1168 1202 IPR003439 GO:0005524
Aip04g03719 1625 Pfam ABC transporter 1223 1273 IPR003439 GO:0005524
Aip04g03719 1625 Gene3D ABC transporter type 1, transmembrane domain 786 1154 IPR036640 GO:0005524|GO:0016021
Aip04g03719 1625 MobiDBLite consensus disorder prediction 751 791 - -
Aip04g03719 1625 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 403 638 IPR003439 GO:0005524
Aip04g03719 1625 SUPERFAMILY ABC transporter transmembrane region 809 1135 IPR036640 GO:0005524|GO:0016021
Aip04g03719 1625 MobiDBLite consensus disorder prediction 664 697 - -
Aip04g03719 1625 CDD ABC_6TM_Pgp_ABCB1_D2_like 822 1133 - -
Aip04g03719 1625 PRINTS Major intrinsic protein family signature 1440 1464 IPR000425 GO:0015267|GO:0016020|GO:0055085
Aip04g03719 1625 PRINTS Major intrinsic protein family signature 1476 1495 IPR000425 GO:0015267|GO:0016020|GO:0055085
Aip04g03719 1625 PRINTS Major intrinsic protein family signature 1521 1539 IPR000425 GO:0015267|GO:0016020|GO:0055085
Aip04g03719 1625 PRINTS Major intrinsic protein family signature 1591 1611 IPR000425 GO:0015267|GO:0016020|GO:0055085
Aip04g03719 1625 PRINTS Major intrinsic protein family signature 1554 1576 IPR000425 GO:0015267|GO:0016020|GO:0055085
Aip04g03719 1625 PRINTS Major intrinsic protein family signature 1404 1423 IPR000425 GO:0015267|GO:0016020|GO:0055085
Aip04g03719 1625 PANTHER ABC TRANSPORTER B FAMILY MEMBER 20-RELATED 1200 1352 - -
Aip04g03719 1625 Pfam ABC transporter 424 568 IPR003439 GO:0005524
Aip04g03719 1625 CDD MIP 1404 1611 IPR000425 GO:0015267|GO:0016020|GO:0055085
Aip04g03719 1625 CDD ABC_6TM_Pgp_ABCB1_D1_like 105 378 - -
Aip04g03719 1625 MobiDBLite consensus disorder prediction 1 63 - -
Aip04g03719 1625 Gene3D - 1155 1204 IPR027417 -
Aip04g03719 1625 Gene3D ABC transporter type 1, transmembrane domain 71 655 IPR036640 GO:0005524|GO:0016021
Aip04g03719 1625 MobiDBLite consensus disorder prediction 742 808 - -
Aip04g03719 1625 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 85 370 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Aip04g03719 1625 Gene3D - 393 640 IPR027417 -
Aip04g03719 1625 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 1150 1344 IPR003439 GO:0005524
Aip04g03719 1625 PANTHER ABC TRANSPORTER B FAMILY 19 1200 - -
Aip04g03719 1625 Gene3D Glycerol uptake facilitator protein. 1387 1623 IPR023271 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip04g03719 Aip-Chr4 131563692 131574869 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip04g03719 54 695 Calmodulin-binding Proteins AT2G36910 44.393 1.22e-165 535
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip04g03719 K05658 - gmx:100789116 2345.85