Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Aip04g03716 | ATGGTGGGAAACGACGATGCTGGTGACCGGAGAGTGTTTTGGAGGTCGGCGTCGTGGTCCTCCTCTCGCACCGGCACCGCTTCCAGCAATAACCCATCCGGTGAGGCGGATCCAAATTCCTGCGGCGGAGACACTGTCACCGGCCAGAATCGCAAGTTCTGTCCGCCGCCACTTACGCCGCGATCGCAGCAGAGTTCCAAGTCCCGGTCGAGCCTGCCGCCCCTCCAGCCGCTTTCGATAGCCCGGCGGAGCCTCGATGAGTGGCCGCAGGCGAGCTCTGATGACATTGGGGAGTGGTTGCCCCCGCAGCCGCCGTTGACCCCTGGTGGCGGCATGAGAGGTAACCCTGGTGAAAGGTTGAAACTTGATCTCTCCTCAATTCAGATGAACAATGATAGGAATTGCAATAATGGCAGTAATAGTAGTGGTAATAATAATAGTTGTAACAATAATGGTGTTAGTGGACTCTTGAAGAGGGATAGAATTGCATTTTTTGATAAGGAGTGTTCAAAGGTTGCTGAACATGTTTACCTTGGTGGTGATGCTGTTGCTAAGAATAGGGATATATTGAAACAGAATGGGATCACTCATATCTTGAACTGTGTTGGTTTTGTGTGCCCCGAGTATTTTAAGGCTGATTTTGTGTATAGAACATTGTGGCTTCAGGATAGTCCTTCGGAGGATATAACTAGTATCTTGTATGATGTGTTTGATTACTTTGAGGATGTTAGGGAACAAGGTGGTAGGGTGTTTGTGCACTGTTGTCAAGGTGTGTCTAGGTCTACTTCGTTGGTGATTGCATACCTCATGTGGAGGGAAGGACAGAGCTTTGATGATGCTTTTCAGTTGGTGAAGGCTGCAAGGGGTATTGCCGATCCGAATATGGGTTTTGCTTGCCAGTTGTTGCAGTGCCAGAAGAGGGTGCATGCAGTTCCTCTTAGCCCTACCTCTTTGCTTAGGATGTATAGGATGGCTCCACACTCGCCTTATGATCCTTTGCATCTCGTCCCCAAAATGTTAACGGATCCTTCGCCTTCCGCATTGGACTCCAGGGGAGCTTTTTTTGTACATATTCCCACTGCAATATTTGTTTGGATTGGTATGAAGTGTGATCCCATCATGGAAAGGGATGCCAGAGGTGCTGTTGGTCAGATTATTCGCTATGAGAAAGCGGAAGGACCCGTTAAAGTGATTAGGGAAGCTCATGAACCTGCTGACTTCTGGGAAGTTTTCTCAAGGTTCTTGCCTTTGATGGATAAATCTTACAGTAAAGTAGAAAGTTTCAAATCAAGTGCTAAGGTTCGGCCGGGTGAGAGGAAAGTGGGCTCCTATGATGTTGATTATGAAGTTTTCCAAAAAGCTATTGTTGGAGGTTTTGTGCCACCATTTCCATCATCAGAGGATGAACATGAAACCCATCTTCCTGCAAGAGAGAGTAGTTGGAGTGCCTTAAGGCGTAAAGTTTCCTCTTCTCATATGAAGGAGATTGTCACAGCCCCTAAGTCATCCCTCCCAAGGGTTTATTCCGATTCCATGTTGTGTATTCATTCAACAAAAACTTCATCTCCATCCTCATCATCTATATCATCATCTTCGCCCTCGTATATCTCTCCAGATTCTGTTTCTTCTGATTCCAATTCTCATTTGAAGTTCTTGTCAGAGGTTTCCCCAGATAACTCTGCAGTTTTGACTGCCAATCCAGTGTCTTCATCTTTGTCCAAGTTTTCTAATTTGACCCTGTTGCAAAGTTCTACTTCCCAACCAGTATCTAATAGTGCCGATATCTGTGATTTCAAGTTGTCACATCCTCATTCTCACCCAGCCCCGTTGCCTTTGAAAAAACCATCATCTTCCTTGGCCGAACGCAGGGGTAGTTTGTCAAAGTCTTTGCAGTTGCCTCTAATGAATGATAAAACAGAGGTAACAGATAAACCATTGCCTTTGCATGCTAATCGACAGGATGGGGTTCTTGAGAATGGCAACTTAAGCTGTTCGCAACCATCAGATAGTACATATAATTCTTGTGGAACTAACAATCGTGTCGAGGACACAGGCGCTAATTCAATTAATGTGGACTACAAGGATTCTTTGCCCGTTAGAAAGTCTAGTGAGTTGTCAATATATGGTTCCTCAAGTGGATACTTGAAGCCTACATCATCAGATTCACTTCATAATGGGGATGGCTCATTGCAGTGCAAGATATCCCAAACTCTAGTATACCGCTGGCCCAATTTAGAAAAGATCGAGACTTTTGGTGCAAGTCATCTGGAATCTAAAGCTGCTTTTGTTGTGTTCTCTCCAACTTTTGATGTCAATGAGGGAAACATTTTATATTTTTGGATAGGGAGGTCTTTCAGTTGCGATGCTTCACGGGTTCAGTTAATCAGAGGTATGAAGTCAGATTTTGTAGGAGAATTTGACTGGAATCGAATTGGTTGTGATGTTCTTACACGGTTAAGTTTGCCGAAGAATACTATTGTCAAGGTTGTTAGACAGAATGAAGAACCACGAGAGTTCCACTCTTTGCTGAGTTCATTGTAG | 2541 | 0.4494 | MVGNDDAGDRRVFWRSASWSSSRTGTASSNNPSGEADPNSCGGDTVTGQNRKFCPPPLTPRSQQSSKSRSSLPPLQPLSIARRSLDEWPQASSDDIGEWLPPQPPLTPGGGMRGNPGERLKLDLSSIQMNNDRNCNNGSNSSGNNNSCNNNGVSGLLKRDRIAFFDKECSKVAEHVYLGGDAVAKNRDILKQNGITHILNCVGFVCPEYFKADFVYRTLWLQDSPSEDITSILYDVFDYFEDVREQGGRVFVHCCQGVSRSTSLVIAYLMWREGQSFDDAFQLVKAARGIADPNMGFACQLLQCQKRVHAVPLSPTSLLRMYRMAPHSPYDPLHLVPKMLTDPSPSALDSRGAFFVHIPTAIFVWIGMKCDPIMERDARGAVGQIIRYEKAEGPVKVIREAHEPADFWEVFSRFLPLMDKSYSKVESFKSSAKVRPGERKVGSYDVDYEVFQKAIVGGFVPPFPSSEDEHETHLPARESSWSALRRKVSSSHMKEIVTAPKSSLPRVYSDSMLCIHSTKTSSPSSSSISSSSPSYISPDSVSSDSNSHLKFLSEVSPDNSAVLTANPVSSSLSKFSNLTLLQSSTSQPVSNSADICDFKLSHPHSHPAPLPLKKPSSSLAERRGSLSKSLQLPLMNDKTEVTDKPLPLHANRQDGVLENGNLSCSQPSDSTYNSCGTNNRVEDTGANSINVDYKDSLPVRKSSELSIYGSSSGYLKPTSSDSLHNGDGSLQCKISQTLVYRWPNLEKIETFGASHLESKAAFVVFSPTFDVNEGNILYFWIGRSFSCDASRVQLIRGMKSDFVGEFDWNRIGCDVLTRLSLPKNTIVKVVRQNEEPREFHSLLSSL | 846 |
Showing 1 to 1 of 1 entries
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Aip04g03716 | 846 | SUPERFAMILY | Actin depolymerizing proteins | 316 | 425 | - | - | |
| Aip04g03716 | 846 | SUPERFAMILY | (Phosphotyrosine protein) phosphatases II | 160 | 309 | IPR029021 | - | |
| Aip04g03716 | 846 | PANTHER | PROTEIN-TYROSINE-PHOSPHATASE MKP1 | 1 | 839 | - | - | |
| Aip04g03716 | 846 | MobiDBLite | consensus disorder prediction | 56 | 75 | - | - | |
| Aip04g03716 | 846 | MobiDBLite | consensus disorder prediction | 519 | 539 | - | - | |
| Aip04g03716 | 846 | SMART | dsp_5 | 168 | 307 | IPR020422 | GO:0006470|GO:0008138 | |
| Aip04g03716 | 846 | ProSiteProfiles | Dual specificity protein phosphatase domain profile. | 168 | 310 | IPR020422 | GO:0006470|GO:0008138 | |
| Aip04g03716 | 846 | Gene3D | Severin | 320 | 415 | IPR029006 | - | |
| Aip04g03716 | 846 | CDD | DSP | 169 | 303 | - | - | |
| Aip04g03716 | 846 | Gene3D | Protein tyrosine phosphatase superfamily | 144 | 310 | IPR029021 | - |
Showing 1 to 10 of 21 entries
Duplication type information
Functional genes information
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Aip04g03716 | - | - | gmx:100790177 | 1008.44 |
Showing 1 to 1 of 1 entries