Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip04g03716 ATGGTGGGAAACGACGATGCTGGTGACCGGAGAGTGTTTTGGAGGTCGGCGTCGTGGTCCTCCTCTCGCACCGGCACCGCTTCCAGCAATAACCCATCCGGTGAGGCGGATCCAAATTCCTGCGGCGGAGACACTGTCACCGGCCAGAATCGCAAGTTCTGTCCGCCGCCACTTACGCCGCGATCGCAGCAGAGTTCCAAGTCCCGGTCGAGCCTGCCGCCCCTCCAGCCGCTTTCGATAGCCCGGCGGAGCCTCGATGAGTGGCCGCAGGCGAGCTCTGATGACATTGGGGAGTGGTTGCCCCCGCAGCCGCCGTTGACCCCTGGTGGCGGCATGAGAGGTAACCCTGGTGAAAGGTTGAAACTTGATCTCTCCTCAATTCAGATGAACAATGATAGGAATTGCAATAATGGCAGTAATAGTAGTGGTAATAATAATAGTTGTAACAATAATGGTGTTAGTGGACTCTTGAAGAGGGATAGAATTGCATTTTTTGATAAGGAGTGTTCAAAGGTTGCTGAACATGTTTACCTTGGTGGTGATGCTGTTGCTAAGAATAGGGATATATTGAAACAGAATGGGATCACTCATATCTTGAACTGTGTTGGTTTTGTGTGCCCCGAGTATTTTAAGGCTGATTTTGTGTATAGAACATTGTGGCTTCAGGATAGTCCTTCGGAGGATATAACTAGTATCTTGTATGATGTGTTTGATTACTTTGAGGATGTTAGGGAACAAGGTGGTAGGGTGTTTGTGCACTGTTGTCAAGGTGTGTCTAGGTCTACTTCGTTGGTGATTGCATACCTCATGTGGAGGGAAGGACAGAGCTTTGATGATGCTTTTCAGTTGGTGAAGGCTGCAAGGGGTATTGCCGATCCGAATATGGGTTTTGCTTGCCAGTTGTTGCAGTGCCAGAAGAGGGTGCATGCAGTTCCTCTTAGCCCTACCTCTTTGCTTAGGATGTATAGGATGGCTCCACACTCGCCTTATGATCCTTTGCATCTCGTCCCCAAAATGTTAACGGATCCTTCGCCTTCCGCATTGGACTCCAGGGGAGCTTTTTTTGTACATATTCCCACTGCAATATTTGTTTGGATTGGTATGAAGTGTGATCCCATCATGGAAAGGGATGCCAGAGGTGCTGTTGGTCAGATTATTCGCTATGAGAAAGCGGAAGGACCCGTTAAAGTGATTAGGGAAGCTCATGAACCTGCTGACTTCTGGGAAGTTTTCTCAAGGTTCTTGCCTTTGATGGATAAATCTTACAGTAAAGTAGAAAGTTTCAAATCAAGTGCTAAGGTTCGGCCGGGTGAGAGGAAAGTGGGCTCCTATGATGTTGATTATGAAGTTTTCCAAAAAGCTATTGTTGGAGGTTTTGTGCCACCATTTCCATCATCAGAGGATGAACATGAAACCCATCTTCCTGCAAGAGAGAGTAGTTGGAGTGCCTTAAGGCGTAAAGTTTCCTCTTCTCATATGAAGGAGATTGTCACAGCCCCTAAGTCATCCCTCCCAAGGGTTTATTCCGATTCCATGTTGTGTATTCATTCAACAAAAACTTCATCTCCATCCTCATCATCTATATCATCATCTTCGCCCTCGTATATCTCTCCAGATTCTGTTTCTTCTGATTCCAATTCTCATTTGAAGTTCTTGTCAGAGGTTTCCCCAGATAACTCTGCAGTTTTGACTGCCAATCCAGTGTCTTCATCTTTGTCCAAGTTTTCTAATTTGACCCTGTTGCAAAGTTCTACTTCCCAACCAGTATCTAATAGTGCCGATATCTGTGATTTCAAGTTGTCACATCCTCATTCTCACCCAGCCCCGTTGCCTTTGAAAAAACCATCATCTTCCTTGGCCGAACGCAGGGGTAGTTTGTCAAAGTCTTTGCAGTTGCCTCTAATGAATGATAAAACAGAGGTAACAGATAAACCATTGCCTTTGCATGCTAATCGACAGGATGGGGTTCTTGAGAATGGCAACTTAAGCTGTTCGCAACCATCAGATAGTACATATAATTCTTGTGGAACTAACAATCGTGTCGAGGACACAGGCGCTAATTCAATTAATGTGGACTACAAGGATTCTTTGCCCGTTAGAAAGTCTAGTGAGTTGTCAATATATGGTTCCTCAAGTGGATACTTGAAGCCTACATCATCAGATTCACTTCATAATGGGGATGGCTCATTGCAGTGCAAGATATCCCAAACTCTAGTATACCGCTGGCCCAATTTAGAAAAGATCGAGACTTTTGGTGCAAGTCATCTGGAATCTAAAGCTGCTTTTGTTGTGTTCTCTCCAACTTTTGATGTCAATGAGGGAAACATTTTATATTTTTGGATAGGGAGGTCTTTCAGTTGCGATGCTTCACGGGTTCAGTTAATCAGAGGTATGAAGTCAGATTTTGTAGGAGAATTTGACTGGAATCGAATTGGTTGTGATGTTCTTACACGGTTAAGTTTGCCGAAGAATACTATTGTCAAGGTTGTTAGACAGAATGAAGAACCACGAGAGTTCCACTCTTTGCTGAGTTCATTGTAG 2541 0.4494 MVGNDDAGDRRVFWRSASWSSSRTGTASSNNPSGEADPNSCGGDTVTGQNRKFCPPPLTPRSQQSSKSRSSLPPLQPLSIARRSLDEWPQASSDDIGEWLPPQPPLTPGGGMRGNPGERLKLDLSSIQMNNDRNCNNGSNSSGNNNSCNNNGVSGLLKRDRIAFFDKECSKVAEHVYLGGDAVAKNRDILKQNGITHILNCVGFVCPEYFKADFVYRTLWLQDSPSEDITSILYDVFDYFEDVREQGGRVFVHCCQGVSRSTSLVIAYLMWREGQSFDDAFQLVKAARGIADPNMGFACQLLQCQKRVHAVPLSPTSLLRMYRMAPHSPYDPLHLVPKMLTDPSPSALDSRGAFFVHIPTAIFVWIGMKCDPIMERDARGAVGQIIRYEKAEGPVKVIREAHEPADFWEVFSRFLPLMDKSYSKVESFKSSAKVRPGERKVGSYDVDYEVFQKAIVGGFVPPFPSSEDEHETHLPARESSWSALRRKVSSSHMKEIVTAPKSSLPRVYSDSMLCIHSTKTSSPSSSSISSSSPSYISPDSVSSDSNSHLKFLSEVSPDNSAVLTANPVSSSLSKFSNLTLLQSSTSQPVSNSADICDFKLSHPHSHPAPLPLKKPSSSLAERRGSLSKSLQLPLMNDKTEVTDKPLPLHANRQDGVLENGNLSCSQPSDSTYNSCGTNNRVEDTGANSINVDYKDSLPVRKSSELSIYGSSSGYLKPTSSDSLHNGDGSLQCKISQTLVYRWPNLEKIETFGASHLESKAAFVVFSPTFDVNEGNILYFWIGRSFSCDASRVQLIRGMKSDFVGEFDWNRIGCDVLTRLSLPKNTIVKVVRQNEEPREFHSLLSSL 846
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip04g03716 846 SUPERFAMILY Actin depolymerizing proteins 316 425 - -
Aip04g03716 846 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 160 309 IPR029021 -
Aip04g03716 846 PANTHER PROTEIN-TYROSINE-PHOSPHATASE MKP1 1 839 - -
Aip04g03716 846 MobiDBLite consensus disorder prediction 56 75 - -
Aip04g03716 846 MobiDBLite consensus disorder prediction 519 539 - -
Aip04g03716 846 SMART dsp_5 168 307 IPR020422 GO:0006470|GO:0008138
Aip04g03716 846 ProSiteProfiles Dual specificity protein phosphatase domain profile. 168 310 IPR020422 GO:0006470|GO:0008138
Aip04g03716 846 Gene3D Severin 320 415 IPR029006 -
Aip04g03716 846 CDD DSP 169 303 - -
Aip04g03716 846 Gene3D Protein tyrosine phosphatase superfamily 144 310 IPR029021 -
Aip04g03716 846 SUPERFAMILY Actin depolymerizing proteins 746 844 - -
Aip04g03716 846 MobiDBLite consensus disorder prediction 620 636 - -
Aip04g03716 846 MobiDBLite consensus disorder prediction 604 684 - -
Aip04g03716 846 MobiDBLite consensus disorder prediction 1 75 - -
Aip04g03716 846 MobiDBLite consensus disorder prediction 656 684 - -
Aip04g03716 846 PANTHER MKPA PROTEIN 1 839 - -
Aip04g03716 846 MobiDBLite consensus disorder prediction 87 119 - -
Aip04g03716 846 Pfam Dual specificity phosphatase, catalytic domain 176 306 IPR000340 GO:0008138|GO:0016311
Aip04g03716 846 MobiDBLite consensus disorder prediction 15 47 - -
Aip04g03716 846 ProSitePatterns Tyrosine specific protein phosphatases active site. 252 262 IPR016130 GO:0016311|GO:0016791
Aip04g03716 846 ProSiteProfiles Tyrosine specific protein phosphatases domain profile. 227 288 IPR000387 GO:0016311|GO:0016791
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip04g03716 Aip-Chr4 131551738 131555817 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip04g03716 2 204 Protein tyrosine phosphatase (PTP) family AT3G55270 53.883 1.99e-55 203
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip04g03716 - - gmx:100790177 1008.44