Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip04g03713 ATGGAGATAACCTACGCATCCCCCAGCTTCGCCGACCTCTCTTCCGCCTCCATGACGTCGCCGGCGACCAACACTACCTCCGCCGCCGCCGGAACAGCCACATCCCGTCCGGTCAGGATCATCCCCCTTCAGCACCCGAACATTACGAGGACGTCTTCTTCTTCGTCTTCCTCGTCGCCGTCGCCGTTTCCGTTCTCTCGGTGGGCGATGAAGCTCCGGCGAATGACGTGGATCGAGTGGATCGAGTTCTTCCTACCTTGCATGCGATGGATTCGCACTTACAAATGGCGCGAGTACTTCCAGACCGATCTCATGGCCGGCATCACCGTCGGCGTCATGCTCGTTCCTCAGTCGATGTCTTATGCAAAATTAGCAGGACTGCAACCGATATATGGACTTTACTCTGGATTTGTTCCCCTATTAGTGTATGGGCTATTTGGTTCTTCTCGCCAGCTTGCAGTTGGTCCAGTCGCATTGGTTTCTCTCTTATGCTCCAATGTGCTAAGTAGCATAGCTGACCCATCCAGTGAATTATACACAGAACTGGCAATACTATTGGCTCTTATGGTTGGGATAATGGAGTGCATAATGGGAATCTTGAGGCTGGGGTGGTTGATTCGTTTCATTAGCCATTCAGTGATATCTGGGTTTACAACTTCTTCAGCTATCATCATTGGTTTATCTCAAGCAAAATACTTCTTGGGATACGATGTAGTCAATAGTAGCAAAATCATACCACTGGTTGAGAGTATAATAGCTGGAGCACATAAGTTTAAATGGCAGCCTTTTGTGATGGGGTCAATTATGCTTGCAATACTACTTACCATGAAACACCTGGGAAAATCAAGGAAGCAGCTAAGATTTTTAAGAGCCGCAGGTCCCCTCACTGCAGTAGTTCTGGGAACTATCTTCGCGAAAATATTTCATCCATCATCAATTTCTCTGGTGGGAGATATACCTCAGGGCCTTCCGACATTTTCTGTTCCTAAAGCTTTCGGGTATGCAGAATCTTTAATTCCAACTGCTGCTCTTATAACTGGTGTGGCGATATTGGAATCTGTGGGTATTGCCAAGGCATTAGCAGCTAAAAATGGGTACGAGTTGGACTCAAATCAAGAGTTGGTTGGGCTTGGTGTTTCGAATGTTCTTGGCTCATTCTTTTCAGCATACCCTACTACAGGTTCATTTTCAAGGTCAGCTGTTAACAATGAAAGCGGTGCCAAATCTGGAGTATCTGGGATTGTTTCTGGAATTATAGTGACCTGTGCACTTTTGTTCTTTACTCCATTGTTTGAGTACATACCTCAGTGTGGTCTTGCTGCTATTGTTGTCTCTGCTGTGATAGGTCTGGTAGATTATGATGAGGCCATCTTTTTATGGCGTGTAGATAAAAAGGATTTTCTTCTTTGGACCATTACTAGCATTACAACGTTGTTCTTTGGTATTGAAGTTGGTGTACTTGTTGGGGTTGGTGTCTCACTTGCCTTTGTCATTCATGAGTCAGCAAATCCACATATTGCTGTTTTGGGTCGTTTGCCAGGGACAACTGTTTATAGAAATGTTAAACAGTATCCTGAAGCATATACATACAACGGAATTGTAATAGTTCGTATTGATGCTCCTATTTATTTTGCAAACACAAGTTATATAAAGGACAGGTTGCGGGAATATGAAATCGATTTTGTTAATTCTACAAGCCGCTGCCCCGAGGTTGAAAGAATTTACTTTGTGATTCTAGAGATGGCACCTGTGACCTATATAGACTCTAGTGCTGTTCAGGCTCTGAAAGACTTGTATCAGGAATACAAATTACGGGGCATCCAGATTGCAATATCAAATCCAAGCCCAGAGGTTCTTCTTACCTTGTCTAGGTCTGGGGTGGTGGATCTGATCGGCAAAGAGTGGTACTTTGTGAGGGTACATGATGCTGTTCAAGTTTGCTTGCAGCGTGTTCAAAACCTTAAAGGAGTATCCAACGGTTCATCAAGAGCACCCACTTTTTCAGAAGACAAACCAAGCTTGTTTGAGCGATTACTAAAACAGAGAGGAGAAAACTTGTCAATTACCGACTTGGAGTCTGGTAATGGCAGACCTCCACCCTCCAATAATGACAAAGCTTCCCATCTGGAACCGTTGTTACCAAAACAACAGTGA 2154 0.4461 MEITYASPSFADLSSASMTSPATNTTSAAAGTATSRPVRIIPLQHPNITRTSSSSSSSSPSPFPFSRWAMKLRRMTWIEWIEFFLPCMRWIRTYKWREYFQTDLMAGITVGVMLVPQSMSYAKLAGLQPIYGLYSGFVPLLVYGLFGSSRQLAVGPVALVSLLCSNVLSSIADPSSELYTELAILLALMVGIMECIMGILRLGWLIRFISHSVISGFTTSSAIIIGLSQAKYFLGYDVVNSSKIIPLVESIIAGAHKFKWQPFVMGSIMLAILLTMKHLGKSRKQLRFLRAAGPLTAVVLGTIFAKIFHPSSISLVGDIPQGLPTFSVPKAFGYAESLIPTAALITGVAILESVGIAKALAAKNGYELDSNQELVGLGVSNVLGSFFSAYPTTGSFSRSAVNNESGAKSGVSGIVSGIIVTCALLFFTPLFEYIPQCGLAAIVVSAVIGLVDYDEAIFLWRVDKKDFLLWTITSITTLFFGIEVGVLVGVGVSLAFVIHESANPHIAVLGRLPGTTVYRNVKQYPEAYTYNGIVIVRIDAPIYFANTSYIKDRLREYEIDFVNSTSRCPEVERIYFVILEMAPVTYIDSSAVQALKDLYQEYKLRGIQIAISNPSPEVLLTLSRSGVVDLIGKEWYFVRVHDAVQVCLQRVQNLKGVSNGSSRAPTFSEDKPSLFERLLKQRGENLSITDLESGNGRPPPSNNDKASHLEPLLPKQQ 717
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip04g03713 717 TIGRFAM sulP: sulfate permease 86 643 IPR001902 GO:0015301|GO:0016020|GO:0055085
Aip04g03713 717 CDD STAS_SulP_like_sulfate_transporter 524 640 - -
Aip04g03713 717 SUPERFAMILY SpoIIaa-like 525 647 IPR036513 -
Aip04g03713 717 Pfam STAS domain 524 643 IPR002645 -
Aip04g03713 717 PANTHER SULFATE TRANSPORTER 4.1-RELATED 55 682 - -
Aip04g03713 717 ProSitePatterns SLC26A transporters signature. 129 150 IPR018045 GO:0008271|GO:0008272
Aip04g03713 717 ProSiteProfiles STAS domain profile. 523 647 IPR002645 -
Aip04g03713 717 Gene3D STAS domain 503 651 IPR036513 -
Aip04g03713 717 PANTHER SULFATE TRANSPORTER 55 682 IPR001902 GO:0015301|GO:0016020|GO:0055085
Aip04g03713 717 Pfam Sulfate permease family 100 473 IPR011547 GO:0016021
Aip04g03713 717 MobiDBLite consensus disorder prediction 686 702 - -
Aip04g03713 717 MobiDBLite consensus disorder prediction 686 717 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip04g03713 Aip-Chr4 131517397 131523437 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip04g03713 3 653 Inorganic Solute Cotransporters AT5G13550 72.171 0.0 949
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip04g03713 K18059 - gmx:100794754 1115.14