Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip04g03688 ATGCAGAACGAGGAGGGACAGATCACTGAGCTCTACATTCCTAGGAAGTGCTCTGCAACAAACAGGTTGATAACTGCAAAGGACCATGCGTCAGTTCAGATCAACATTGGTCACTTGGATGAGAGTGGTCTCTACAATAACACCTTCTCCACATTTGCCCTCTGCGGCTTCATTCGCGCTCAGGGTGATGCCGACAGTGCACTAGACCGCTTGTGGCAGAAGAAGAAAGCCGAGAAGCAGCAGTAG 246 0.5041 MQNEEGQITELYIPRKCSATNRLITAKDHASVQINIGHLDESGLYNNTFSTFALCGFIRAQGDADSALDRLWQKKKAEKQQ 81
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip04g03688 81 PANTHER 40S RIBOSOMAL PROTEIN S21 1 81 - -
Aip04g03688 81 PANTHER 40S RIBOSOMAL PROTEIN S21 1 81 IPR001931 GO:0003735|GO:0005840|GO:0006412
Aip04g03688 81 Pfam Ribosomal protein S21e 1 77 IPR001931 GO:0003735|GO:0005840|GO:0006412
Aip04g03688 81 PIRSF RPS21e 1 81 IPR001931 GO:0003735|GO:0005840|GO:0006412
Aip04g03688 81 Gene3D - 1 81 IPR038579 -
Aip04g03688 81 ProSitePatterns Ribosomal protein S21e signature. 11 19 IPR018279 GO:0003735|GO:0005840|GO:0006412
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip04g03688 1 81 Cytoplasmic Ribosomal Protein Gene Family AT5G27700 81.481 1.72e-49 149
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip04g03688 K02971 - gmx:100817753 152.91