Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip04g03685 ATGGCCGATGATGGAGCGGCCGGGGCGGCGTCTTCTTCGTCATCACCGGCACCGTGGTTGTGGTCAACGTCGTCCTTATCAGAAGGCATGTATGATGTTTTTCTGAACTTTAGAGGCAAGGACACAAGGTTCTTATTCACAGATTATCTCTATCATGGCCTGGCCGATGTAAAAAAACTGCAAGTATTCAGGGATGATCCGGGTCTGGAACTAGGTGACGAAATTAAACCTACTCTGATGGAAGCCATTAAAAGATCAAGGATTCATATTGTTGTGATGAGTGAAAACTATGTATCTTCCTCATGGTGCCTCCTGGAACTAGAGCAGATGCTCAAGTATTACTCCAAGGATGGAAACAAACGATCCGTTATTCCAGTTTTTTATCACGTGACGCCCGCGGAAATGAGATATCAGACTAGCACCATATCTAAGAAAGCCATGAAGAAACATAAAAAGAGAGAAGGCAAAGACAAGGCGAAAGCGTGGAAGTTGGCTTTATCTAGAGTTTGCGGGATAAGTGGACAACACATTGTTAAGAAGGGAAATCGTCATGAAACAGAGGTCGTAGGCAAGATTGCTGAACAAGTCTCAGCAAAAATTCTAGAGATCAGGCAACAAATGAATAGATTTGTTTCTCAATTTAAAGTGGTTGAATCACTTTTGAACCTTGAATCTTCTGATAATGTTGGTGTGGTGGGAATTTATGAAGATCCTAAAATAGCCAAAAGTTACATAACAAGATTTGCTTTTGAGCTATACTATAAGATCAAATACAAGTTCAGAGCGGCAAGTTTTCTTGTTGATGTTAGTAAACAGTTAAGGGAAAACACCGCTAATGGCTTGGAAAATCTCCACAAGGAGCTTCTTTCAGATATGGGTGTGGAAACCATGCAGGAGTTGCCACGTAAGAGGGTGCTTCTGGTTCTGGAAGGGGTTGATAGTGAACAGCATTTGAAGTTGCTAGTGGAAATGGGAGTAAGTGATTGGTTTAGTGGTGGTAGTAGGATCCTCATAGCAACAGAAAACAGAAATCTGTTTGAGGATTGTCCTGCTGTGATGAATGGTGTTAAGCTTGAGAAACATTGCATATGTGAAGGTGAATTGGTGAAGGAAAAGATTGTGAAGGAGAAGAAGGTAGTGGGATTTGTGAAAGAATTCATCGATGTTATTAATCAACTGAAGGAAGAAGATTCAAATAGGAGGAATGTTGTTTCAATTGTCGGCATGGGCGGGTCGGGCAAGACTACTCTTGCCCGAATGATCTATGACAGCAATGAGGTGAGGGAGGTATTCCCTTGCCGTGCATGGGCAACTGTTTCCAAACACTGCAATGAAAATAAAGTTTATGGAAAGCTTCTCAAGTCTTTGAAGGTACCAAAATCTGAATATGAGAAATTAAGTAAAGAGGAGTTGAAGAAGGAGGTGAGAAAACGTTTGAATGGGCAAAGCGGGAAGTATTTGATAGTGCTGGATGATGTGTGGAACACTAAGGCGTGGAACAAGTTGGAGTATCTTCTCCCAGAAAAGAATAATGGGAGCAGGATATTGATGACTACACGAAATGATAGGGTGGCAAACCATGCAATGTCAAAGGAACCTCACCATCAACTTGGCCCTTTGGATGATGAAGAAAGTTGGGAATTATTCCGTAGCGAGGTGTTTGGTAGAGAAGAGTGTCCTTCTGATTTAGAGTCTATTGGTAAATCAATTGCCCAAAGTTGCAAGGGTTTGCCATTAGCTGTTGCAACCATAGCAGGGCTTGTCAAAGAGAGGAAGAGATCAACAACAGAGTGGCAAAGTATTAACAATGTAATTCTTCAATGGGATGATGATGATGATGATGATGATGATGATGATGATGATGATAGTGATGATGATAAGAAGCCGATGACGATGAGTAGGATGATGAAGATATTGCAGCTGAGCTATGATGATTTACGTCCAAAATTGAAGTCATGCTTTCTATATCTTGGGGTGTTTCCGGAAGATTGCAAGATTGCAGCAAGGGCTTTGATTGAACTATGGAATGCAGAAGGCTTGACAAAAGTAACGGAAACTGGAAGTTCAAATGCAGCAGAGCCGGAAGACATTGGTGAGGAGCGCTTGAAGGAGCTAGTGGATCGTAACTTGGTACAAGTGGTGAGTAGGAAGAGTGATGGGGAAGGCGTGAAAACATGTCAGATCCACGATCTCATCCGGAAACTGTGCATATCACTGAGTAACAAACCAGATAACAAGAACAATGATCGCAGATTATTATCCTTTACCAGAAACGAAGGATCCTATACCTGTTCATTAGAGACGTGTAATAAAGAATCCACTCGTTCGTTATTCTTTTATGAAGATGCACGGGAATGGTTACACCATATTCCAGAAAACCTGCGAGTTAATGTGCTATATTTTTCGAAATGGGCTCGGGTTAGTTCAACAAGTGCCGAGTATTTGAAGAGTTTGACACCCCTCCGGTACTTGAAAATGGAAGTTGAATTAGATGGATTATGTGACTTTCACAATTTGGAAACATTACATGTACTGTACACTAGTTCGAAGGACCTAAGAATTGGGGGCTTAAAGCAACTGAGACATCTTCATTGTGAATTTCTGGTGAAATTGATAGATGAACAAGTAAAAGATAAAATGCAGAATCTCCAAACCCTATGTTATGTGATTGCCGATTCAAAACTAGGGAGCTTACTAGGCAATGCTTACTTTCCCAACTTGAGAACACTCGGTTTATATATAACTGCATACCAAGACCGTCAAGCAACAGAAGCAGAAGAAATCTTAAAGAGCCTGCACTGCCTAAGAAAGTTGCGGAAGGTGAAACTTACGTTTGCTCCCTTTGGTTGGGTTCCATTAGATAGAATTGCATTTCCGTCAACTCTTACCAAGATTACCTTGTCATCATTTGGGGGCTTCATGTCCAAAGACATGATTGTTTTGGGACAAATTCGCAGCCTTCAAATTTTAAAATTGAAATCTGGAATTTGTACTGAAATACCTCTTCATTGTGGTACTGCTGGGAGCTTTCCGGAGCTTCAAGTGCTCATCATGATAAGGATGTCTGTCAAACGTCTTACATCAGAAGAAGGTGCGATGCCTCGTCTTCGACGTGCTGTCTTCTGTGACTGCCCTTACTTGTTGGAGGAGGAGGTTACTCAAAAAATGCTTTCCTTGGGTAGTAACTTGGAGTTTTTAGACCGTCAAGTGGACGATGATGATTGA 3225 0.4146 MADDGAAGAASSSSSPAPWLWSTSSLSEGMYDVFLNFRGKDTRFLFTDYLYHGLADVKKLQVFRDDPGLELGDEIKPTLMEAIKRSRIHIVVMSENYVSSSWCLLELEQMLKYYSKDGNKRSVIPVFYHVTPAEMRYQTSTISKKAMKKHKKREGKDKAKAWKLALSRVCGISGQHIVKKGNRHETEVVGKIAEQVSAKILEIRQQMNRFVSQFKVVESLLNLESSDNVGVVGIYEDPKIAKSYITRFAFELYYKIKYKFRAASFLVDVSKQLRENTANGLENLHKELLSDMGVETMQELPRKRVLLVLEGVDSEQHLKLLVEMGVSDWFSGGSRILIATENRNLFEDCPAVMNGVKLEKHCICEGELVKEKIVKEKKVVGFVKEFIDVINQLKEEDSNRRNVVSIVGMGGSGKTTLARMIYDSNEVREVFPCRAWATVSKHCNENKVYGKLLKSLKVPKSEYEKLSKEELKKEVRKRLNGQSGKYLIVLDDVWNTKAWNKLEYLLPEKNNGSRILMTTRNDRVANHAMSKEPHHQLGPLDDEESWELFRSEVFGREECPSDLESIGKSIAQSCKGLPLAVATIAGLVKERKRSTTEWQSINNVILQWDDDDDDDDDDDDDDSDDDKKPMTMSRMMKILQLSYDDLRPKLKSCFLYLGVFPEDCKIAARALIELWNAEGLTKVTETGSSNAAEPEDIGEERLKELVDRNLVQVVSRKSDGEGVKTCQIHDLIRKLCISLSNKPDNKNNDRRLLSFTRNEGSYTCSLETCNKESTRSLFFYEDAREWLHHIPENLRVNVLYFSKWARVSSTSAEYLKSLTPLRYLKMEVELDGLCDFHNLETLHVLYTSSKDLRIGGLKQLRHLHCEFLVKLIDEQVKDKMQNLQTLCYVIADSKLGSLLGNAYFPNLRTLGLYITAYQDRQATEAEEILKSLHCLRKLRKVKLTFAPFGWVPLDRIAFPSTLTKITLSSFGGFMSKDMIVLGQIRSLQILKLKSGICTEIPLHCGTAGSFPELQVLIMIRMSVKRLTSEEGAMPRLRRAVFCDCPYLLEEEVTQKMLSLGSNLEFLDRQVDDDD 1074
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip04g03685 1074 Gene3D Ribonuclease Inhibitor 789 1069 IPR032675 -
Aip04g03685 1074 ProSiteProfiles TIR domain profile. 29 200 IPR000157 GO:0007165
Aip04g03685 1074 Pfam TIR domain 31 206 IPR000157 GO:0007165
Aip04g03685 1074 SUPERFAMILY L domain-like 728 1067 - -
Aip04g03685 1074 SMART till_3 30 172 IPR000157 GO:0007165
Aip04g03685 1074 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 374 657 IPR027417 -
Aip04g03685 1074 SUPERFAMILY Toll/Interleukin receptor TIR domain 21 174 IPR035897 -
Aip04g03685 1074 PANTHER DISEASE RESISTANCE RPP8-LIKE PROTEIN 3-RELATED 272 1056 - -
Aip04g03685 1074 Pfam NB-ARC domain 388 605 IPR002182 GO:0043531
Aip04g03685 1074 MobiDBLite consensus disorder prediction 608 631 - -
Aip04g03685 1074 PANTHER DISEASE RESISTANCE PROTEIN RP 272 1056 IPR044974 GO:0006952
Aip04g03685 1074 Gene3D - 539 642 IPR042197 -
Aip04g03685 1074 Gene3D - 23 200 IPR035897 -
Aip04g03685 1074 MobiDBLite consensus disorder prediction 608 625 - -
Aip04g03685 1074 Gene3D - 360 533 IPR027417 -
Aip04g03685 1074 Gene3D - 643 738 IPR036388 -
Aip04g03685 1074 PRINTS Disease resistance protein signature 403 418 - -
Aip04g03685 1074 PRINTS Disease resistance protein signature 480 494 - -
Aip04g03685 1074 PRINTS Disease resistance protein signature 574 588 - -
Aip04g03685 1074 Gene3D - 201 358 IPR027417 -
Aip04g03685 1074 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 216 350 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip04g03685 Aip-Chr4 131312919 131318763 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip04g03685 80 349 WRKY Transcription Factor Family AT4G12020 25.795 2.76e-14 76.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip04g03685 - - aip:107637424 1430.62