Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip04g03684 ATGGCCGACAATGGAGCAGCTGCCTCCTCCTCTTCGTCATCATCATCCGGTATGTACGATGTTTTTCTGAGCTTTAGAGGCGAAGACACAAGATACATATCCTCAGATTCTCTCTACCGTAAACTCGCAGAAAACGGAAACCTCAAAGTGTTTAGAGATTGTCCGGATCTGAAACTAAGTGACCCAATTAAATCTACTCTTGTGGAAGCCATTAAAAGATCAAGGATGTTCATTGTTATGATGAGCCCAAACTATGTGTCTTCCTCGTGGTGCCTCGTGGAGCTAGTGGAGATACTCAAGTACTCCAACAATGGAAGAAATCGCCCCGTTTTTCCAGTTTTTTACCACGTGGAGCCTTCAGAAGTTAGATATCAGAATAGCATCAAATCTAAGGAAGCCATGAGAAAACATGAAGATACATACGGCAAAGAGACTGTGGCAGCGTGGGAGTCGGCTCTATCTACAATTTGCGGGCTATGCGGACAGCACATTGTTGAGAATAAGGGGTATGAAACTGAGGTCATTGACAAGATTGCTGAACAAGTCTTTGCAAAAAATCGAGAGATCAAGCAACTATTGAATAGATTTGATTCTCAATTTGAAGAAGTGGAATCACTTTTGGACCTCAAATCTCGTAATACTCTTCGTATGGTGGGTATTTACGAAGAAGATGCTGAAATAGACAAAACAACATTCACTTTGGAGCTATACTATAAGATCAAACATGAATTCAAAGAGGCAAGTTTTCTTCTCGGTGTAAGTAAAACTTTAGAGGAAAGCGCTGATGGCCTGAAAAATCTCCAAAAGGCGATTCTTTCTGATATGGGTGTAGAGGTAAGCACTGTGGATTGCACATCTACCGGATCCTGGGAAATCAAGCTGAGGTTGCGCCATAAAAGAGTGCTTTTGGTTCTAAATGAAGTTGATAGTAAAATGCATTTAGAGTTGCTGGCAAGAAGGGGTGATTTGTTTGGTCCTGGTAGTAGGATCATCATAACAACAGAGGACAAAGATCTCTTGGATAATTATCCTGTGATAGATGGTGTTGAGACTAAGACATATTGCATTCGTGAATGTGATGAATTCGAAGGCAACAAAGACAGTAATCATATTGTGAAGGAAGAATATGTAGTGGGATTGAAGAAAGATTTCAATGATGTGATTAAGCAACTCATGGAAGAAGATTCCCCTGATGGGAACATTGTTTCCATAGTTGGCATGGGTGGGATAGGGAAGACTACACTTGCTCGAAAGATCTACAATAGCGATGAGGTCAAGAAGCTATTCGCTTGCCGTGCATGGGCAACTATTTCCAAGGATTGCAGAGAGGAGGAGGTTTTTAAAAGTCTTCTCAACTGTCTGAAGTCATCCACTTCTAAACATGAATATTCAAGTAGTGAAGAGGAGTTAATGCAGAAGGTGAGGAAATGTTTGACAGGGAAAAAGTACTTGATAGTCCTTGATGATATTTGGGACACTAAAGCATGGGCCAGTCTAAAGGGTTGTTTCCCAGAAAACAACGATGGTGGCATGATACTAATAACAACCCGTAATGATCAGGTGGCCTACTCTTTAAGGTCAAAGGTTCCTCACCACAAGCTTCCCTTCATGGATAAAGAACAAAGTTGGAAACTGTTTTGCAATGAGGTGTTTTGCAGAGAAAAGTGTCCTCCCAAGCTAGAACGAATTGGTAGATCAATTGCCAACACTTGCAGCGGTTTACCACTGGCTATCAAAATCACAGCTGGGTTTGTAGCAAAAACGAAGAGATCGGGGGATGAATGGAAAAGAATCAAGAAACTACTCCCTCATTTGCGTATTGTTGAAGAGAAGGAATGTAAGGAGATGAAGGAGAGATTGAAGCTTAGCTACGATGATCTTCCTGAGAACATCAAGCCATGCTTCCTATATCTTGGAGTTTTTCCCGAAGATGATCAGATTTGTGTGCGAGACTTAATCCGTCTATGGATAACAGAGGGCCTCATAGAAGAGCCAATCCAAAGTGGAAGATCAAAAGCAACACCCACAGAACTTGAAGATATTGGTGAGCAATACTTGACAGAGCTAGTGGGTCGTAACTTGGTACAAGTGTCTCAGAGAAGGAGTGATGACAAAGGCGTGAAAACATGTCAGATCCACGACCTCATCCGGGAACTTTGCATATCAGAGAGTAATAAAAACCCTGATAACAATAATAATAATGCTCCTAGGTTATCCTTTCCCAAGGATATAGGATCTTATGCATGTTTGGTAACATGTAGTCAATCAGGCACTTGTTCCTTGTTCGTGTATGGAGATGCAGAGGGGTGGTCACATCATATTCCAAAAGACTACCGAGTTATTGTGCTATATTTTAAAGGATCGAAGATGGATATAATTAGTGGAAAGAATGCTGGGTTTTTGAAGGGGTTGAAAAGCCTCAGGATCTTGAGAGTGGAATTTCCTGACCCATACCGGTTCTATCCGCTTCATCGTATGCACATATTACATATACTAGAACATTCTGCAGAGGACATAAATATTGAGGGGTTAAAGCAACTAAGACATCTCCGCAGTAGATATGCAGTGCACTTATTAGTTGATGAAGAAGGGGTAAAAGAAAAAATGCAGAATCTCCAAACCCTATGTTATGTGCATCTCGATTCACGACTAGAGTTCTTACTCGACAATGGCTACTTTCCCAACTTGAGAACACTGGGTTTACATTCAGCAGAAAGAAAGTTAAGTTGCTTACGCCGCTTGAGCAATCTACGTGAATTAAAACTTGAGCATATGACCTCTAAATATGTTCCATTAGATAAAAATGTATTTCCGTCAAATCTTACCAAGATTACCTTGTCATGGTATGTGGGTTTTAGCACCAAAGCCATGAATGCTTTGGGACAAATCCCCACCCTTCAAATTTTGAAATTATATGAAGTACAATGTATGGAAGGAATCCTTAATTGTGGTACTGAGAGGAGCTTTCCGCGGCTTCAAGTGTTTATCATGAAAAAGGTGCAGGTCAAAGGTCTTACATTAGAAGGAGGTGCAATGCCTTGCCTGCAACGTGCAGTCTTCCATGAGTGCCCTGGCTTGAAGTTGGAGTACCTTCCTGAACAAATGCGTTCCTCGGGTTGCAACTTGGAGTTTTCAGAACATGTTGAGCAACGGCGTTCTTGGGTTGTAAAAACTTGGAGTTTTCAGAACAtgaacaagaataagaaagtgatgatgataccgataatgatgatgatgatgatgatgataccgatgatgatgaagatgatgatgattgattga 3282 0.4013 MADNGAAASSSSSSSSGMYDVFLSFRGEDTRYISSDSLYRKLAENGNLKVFRDCPDLKLSDPIKSTLVEAIKRSRMFIVMMSPNYVSSSWCLVELVEILKYSNNGRNRPVFPVFYHVEPSEVRYQNSIKSKEAMRKHEDTYGKETVAAWESALSTICGLCGQHIVENKGYETEVIDKIAEQVFAKNREIKQLLNRFDSQFEEVESLLDLKSRNTLRMVGIYEEDAEIDKTTFTLELYYKIKHEFKEASFLLGVSKTLEESADGLKNLQKAILSDMGVEVSTVDCTSTGSWEIKLRLRHKRVLLVLNEVDSKMHLELLARRGDLFGPGSRIIITTEDKDLLDNYPVIDGVETKTYCIRECDEFEGNKDSNHIVKEEYVVGLKKDFNDVIKQLMEEDSPDGNIVSIVGMGGIGKTTLARKIYNSDEVKKLFACRAWATISKDCREEEVFKSLLNCLKSSTSKHEYSSSEEELMQKVRKCLTGKKYLIVLDDIWDTKAWASLKGCFPENNDGGMILITTRNDQVAYSLRSKVPHHKLPFMDKEQSWKLFCNEVFCREKCPPKLERIGRSIANTCSGLPLAIKITAGFVAKTKRSGDEWKRIKKLLPHLRIVEEKECKEMKERLKLSYDDLPENIKPCFLYLGVFPEDDQICVRDLIRLWITEGLIEEPIQSGRSKATPTELEDIGEQYLTELVGRNLVQVSQRRSDDKGVKTCQIHDLIRELCISESNKNPDNNNNNAPRLSFPKDIGSYACLVTCSQSGTCSLFVYGDAEGWSHHIPKDYRVIVLYFKGSKMDIISGKNAGFLKGLKSLRILRVEFPDPYRFYPLHRMHILHILEHSAEDINIEGLKQLRHLRSRYAVHLLVDEEGVKEKMQNLQTLCYVHLDSRLEFLLDNGYFPNLRTLGLHSAERKLSCLRRLSNLRELKLEHMTSKYVPLDKNVFPSNLTKITLSWYVGFSTKAMNALGQIPTLQILKLYEVQCMEGILNCGTERSFPRLQVFIMKKVQVKGLTLEGGAMPCLQRAVFHECPGLKLEYLPEQMRSSGCNLEFSEHVEQRRSWVVKTWSFQNMNKNKKVMMIPIMMMMMMMIPMMMKMMMID 1093
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip04g03684 1093 Gene3D - 362 530 IPR027417 -
Aip04g03684 1093 Gene3D Ribonuclease Inhibitor 772 1074 IPR032675 -
Aip04g03684 1093 ProSiteProfiles TIR domain profile. 17 186 IPR000157 GO:0007165
Aip04g03684 1093 Gene3D - 537 628 IPR042197 -
Aip04g03684 1093 PANTHER - 338 1049 - -
Aip04g03684 1093 Gene3D - 11 186 IPR035897 -
Aip04g03684 1093 PANTHER DISEASE RESISTANCE PROTEIN RP 338 1049 IPR044974 GO:0006952
Aip04g03684 1093 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 229 356 IPR027417 -
Aip04g03684 1093 Coils Coil 175 195 - -
Aip04g03684 1093 SMART till_3 18 159 IPR000157 GO:0007165
Aip04g03684 1093 Pfam NB-ARC domain 382 626 IPR002182 GO:0043531
Aip04g03684 1093 ProSitePatterns Neurotransmitter-gated ion-channels signature. 634 648 IPR018000 -
Aip04g03684 1093 PRINTS Disease resistance protein signature 401 416 - -
Aip04g03684 1093 PRINTS Disease resistance protein signature 477 491 - -
Aip04g03684 1093 PRINTS Disease resistance protein signature 571 585 - -
Aip04g03684 1093 PRINTS Disease resistance protein signature 912 928 - -
Aip04g03684 1093 Gene3D - 629 721 IPR036388 -
Aip04g03684 1093 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 370 638 IPR027417 -
Aip04g03684 1093 SUPERFAMILY L domain-like 706 1038 - -
Aip04g03684 1093 SUPERFAMILY Toll/Interleukin receptor TIR domain 9 156 IPR035897 -
Aip04g03684 1093 Pfam TIR domain 19 189 IPR000157 GO:0007165
Aip04g03684 1093 Gene3D - 187 345 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip04g03684 Aip-Chr4 131299139 131303985 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip04g03684 68 337 WRKY Transcription Factor Family AT4G12020 27.372 7.70e-18 87.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip04g03684 - - aip:110271380 1055.43