Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip04g03682 ATGTGTATGTATGTTGCTTGCGGACCATGGGGTATGGTTATGGACAAGATTGTTGAAGAGGTCACAAAAAGACTTCCTCCCTTGCCTCTGCATATTGATCGTCCACTTGGATGTGATTCTGAACTTGAAGAGGCAAAATCACTTCCACAGATTGATTCACATGCTACCTCTTTTATGTTGGTAATTCATGGAGAACGTGAAATAAGCAAATTTGTTGCGGAGCTGTATAACAAGATTAGGCCTCACTTTGTAGCTGCAAGTTTTCTTTCTAATGTCAGTGAGAAAACAAATGAAAGTGGTTTTGGCCTAGAAATTCTACAGATCACCCTTCTTTCTGAGATGATAGGAAAGGTAAAGACTAAGATTGGAAGTACATTCAAAGGATCCTCTGAAATAAAAAAAAGACTAGACCAGAAAAGGGTTCTTCGAGTTTTGGATGATGTTGATAGCATACAACAACTGAATTCACTAGCAGGAGGAACTGATTGGTTTGGTCCTGGTAGTAGAATCAGTATAACAACAAAAAATAAAAATGGGCTAGAAGATGAGCATTTGTCAAATAATGGTCTTAATATGGTTATGAAGCATTACATCTACAAAGAAAGTGGATCTACTGTGAAAGAAAAAAATGTAGTGGGATTGGTGAAAGATTTTGAAATTGTGATTAATCAGCTCAAGGAAGAAGGTTCCCCTGAGAATGTTGTTTCCATTGTTGGCATGGGTGGGTTAGGCAAGACTACACTTGCTCGAAAGATCTACAATAGCGATGAGGTCAAGACGATATATCCTTGCCGTGCCTGA 801 0.3858 MCMYVACGPWGMVMDKIVEEVTKRLPPLPLHIDRPLGCDSELEEAKSLPQIDSHATSFMLVIHGEREISKFVAELYNKIRPHFVAASFLSNVSEKTNESGFGLEILQITLLSEMIGKVKTKIGSTFKGSSEIKKRLDQKRVLRVLDDVDSIQQLNSLAGGTDWFGPGSRISITTKNKNGLEDEHLSNNGLNMVMKHYIYKESGSTVKEKNVVGLVKDFEIVINQLKEEGSPENVVSIVGMGGLGKTTLARKIYNSDEVKTIYPCRA 266
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip04g03682 266 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 202 264 IPR027417 -
Aip04g03682 266 Pfam NB-ARC domain 218 263 IPR002182 GO:0043531
Aip04g03682 266 PANTHER RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED 10 183 - -
Aip04g03682 266 Gene3D - 16 186 IPR027417 -
Aip04g03682 266 Gene3D - 189 266 IPR027417 -
Aip04g03682 266 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 10 183 IPR044974 GO:0006952
Aip04g03682 266 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 25 181 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip04g03682 Aip-Chr4 131289270 131290070 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip04g03682 75 178 WRKY Transcription Factor Family AT5G45050 35.577 1.83e-10 59.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip04g03682 - - aip:107637433 498.434