Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip04g03680 ATGCTGGGAATTCATGGAGATGGTGATGAAATAAGCAAATTTGTTGCGGAGTTGTATAACAAGATTAGGCCTCACTTTGTAATTGCAAGTTTTCTTTCTAATATCAGTGAGAAAACAAATGAAAGTGGTGGTGGCCTAGAACATCTACAAGAAACTCTTCTTTCTGAGATGGGAGAGGTGGTCAAGACTAAGATCGGAAGCACATTCAAAGGATCCTCTGAAATTAAACGAAGACTGGGCCAAAAAAGAGTTCTTCTAGTTTTGGATGATGTTGACAGTATACAACAACTGAATTCACTAGCGGGAGGAACTGATTGGTTTGGTCCCGGTAGTAGGATCATCATAACAACAAGATATGAACATGTGCTAGATGATCATATGTCAAATAATGGTGTTGAGGTTAAGAAATATTACTTCACCGAAGGAAGTAGTTCTACTAGGAAGGAAGAAAATATAGTGGGATTGGAGAAAGATTTTGAAGTTGTGATTAATCAACTCAAGGAAGCAAACTCTCCTGGTAATGTTGTTTCCATTGTTGGCATGGGTGGGTTAGGAAAGACTACTCTTGCTCGAAAGATTTTTGATAGCAATGAGGTGAAGAAGCTATTCTCTTGTCGAGCATGGGCAACTGTTTCCAGAGATTTCAGAGGAAAGGAAGTTTTTAGAAGCCTTCTCAACTTAACATCCAAATCTAAACATAAAGATTCAAGTAGTGAAGAGGAGCTAAAGGAGAAGGTGAGGAAATATTTGAATGGAAAAAAGTACTTGGTAGTCCTTGACGATGTTTGGGACACTAACAACGCATGGGGTGCTCTAAAGGGTTGTTTCCCTAAAAACAACAATGGAAGCATGATACTACTAACTACCCGCGACGATCGGGTGGCCAACGTTTCAGAGTCAAAGAAGCCTCATCACAGGCTTTCCTTTTTGGATAAAAAAGAAAGTTGGAAACTGTTTTGCAATGAGGTATTCTGCAGCAAAAAGTGTCCTCGGGATCTACAACGTATTGGTAGATCAATTGCCCAAAGTTGCAATGGTTTTCCATTGGCTATCAAAACCATAGCGGGGATTGTAGCGAAGAGGGAGAGATCAGAAGATGCATGGGAAGAAATCAAGAGCCTGCTCCCTTACTGGTCTGTTGCTGAAGACAAGGAAGGTAAGAAGATGATGGAGATATTGAAGCTTAGCTACGATGATCTGTCTGAGAAAATGAAGCCATGCTTCCTATATCTTGGGGTGTTTCCTGAAGATATAGAGATTCGGGTGAGAGATTTAATCGAAGTATGGATAGCAGAAAGGTTGATAGAGCCAATCCAGAGTGGAAGATCAAAAGTAGCACCAGAACCTGAAGATATTGGTGAGCAATACTTGAAGGAACTAGTGGATCGTAACTTGGTACAAGTGGCCAGTAGGAGGAGTGACGGGAAAGGCGTCAAAACTTGTAAGATCCATGATCTCATTCGGGAATTGTGTATTTCAGAGAGTAACAGTAACAATGCTCGTAGGTTGTCATTTCCAAGGGATATAGGATCCTATGCATGTTCAGTAACATGTCATCAATCATGCACTTATTCCTTGTTCATTTATGGAGATGCCAAGGGATGGTCACATCATATTCCAGAAGACTATCGAGTTAATGTGCTATATTTTGAAGGATGGATTGATGATCTAACTAATGAAAAGAATGTTGAGAATTTGAAGGAGTTGAAAAGTTTCAAGTTCTTGAAAATAGATATTTTTTACCCAAATGGGGTAAGTAAGCTTCAGAGCATACAAACATTACATATAATGAACGATGGAACTCCCAAGGACCTAAGTATTGGGGGGTTAAAGCAACTCAGACATTTTCGAAGAGAATGTGAAGTGTGTTTATTAGTAGATGAAGATGGGGTAAAAAACAAAATGCAGAATCTCCAAACCCTACTTTATGTGCATGTTGATTCACAACTAGGGTCCTTACTCGACAATGGCTACTTTCCCAACTTAAGAACACTGGGTTTATGTGTAACTGAAGAAGGAAGACATTCAGCAGAAAAAACTTTTAGTAGTTTACACTGCCTAAGCAATCTACAGAAACTCAAACTGGAGCTCCCGGTCTCTGAACCGTTTCCAATTCCAGTTGATAAAATTGCATTTCCGTCAAATCTTAGCAAGCTTACCATATCATTTTTTGATGGTTTGAAGTCCGAAGACATGAATGCATTGGGACGAATTCCCGGCCTTAAGATTTTAAAATTCCATGATGTACGTTGTATCGAAAAAATCCTTAATTGTGGTACTGATAGGAGCTTTCTGCAGCTTCAAGTGTTTATCATGATATCTGTGTGTGTCAAATGTCTTACCTTAGAAGATGGTGCCATGCCTTGCCTTCGACGTGCGGTCTTCCATGGCTGCCCTGGCTTGGAGTTGAAGGACCTTCCTGAACAAATGCGTTCCTTGGGTTGTAACTTGCATTTTACGCCACATGACGACGAGGATTTTGAAGAAGATGATGATGAGGATGATGATGATTTTGATGATTGA 2523 0.3995 MLGIHGDGDEISKFVAELYNKIRPHFVIASFLSNISEKTNESGGGLEHLQETLLSEMGEVVKTKIGSTFKGSSEIKRRLGQKRVLLVLDDVDSIQQLNSLAGGTDWFGPGSRIIITTRYEHVLDDHMSNNGVEVKKYYFTEGSSSTRKEENIVGLEKDFEVVINQLKEANSPGNVVSIVGMGGLGKTTLARKIFDSNEVKKLFSCRAWATVSRDFRGKEVFRSLLNLTSKSKHKDSSSEEELKEKVRKYLNGKKYLVVLDDVWDTNNAWGALKGCFPKNNNGSMILLTTRDDRVANVSESKKPHHRLSFLDKKESWKLFCNEVFCSKKCPRDLQRIGRSIAQSCNGFPLAIKTIAGIVAKRERSEDAWEEIKSLLPYWSVAEDKEGKKMMEILKLSYDDLSEKMKPCFLYLGVFPEDIEIRVRDLIEVWIAERLIEPIQSGRSKVAPEPEDIGEQYLKELVDRNLVQVASRRSDGKGVKTCKIHDLIRELCISESNSNNARRLSFPRDIGSYACSVTCHQSCTYSLFIYGDAKGWSHHIPEDYRVNVLYFEGWIDDLTNEKNVENLKELKSFKFLKIDIFYPNGVSKLQSIQTLHIMNDGTPKDLSIGGLKQLRHFRRECEVCLLVDEDGVKNKMQNLQTLLYVHVDSQLGSLLDNGYFPNLRTLGLCVTEEGRHSAEKTFSSLHCLSNLQKLKLELPVSEPFPIPVDKIAFPSNLSKLTISFFDGLKSEDMNALGRIPGLKILKFHDVRCIEKILNCGTDRSFLQLQVFIMISVCVKCLTLEDGAMPCLRRAVFHGCPGLELKDLPEQMRSLGCNLHFTPHDDEDFEEDDDEDDDDFDD 840
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip04g03680 840 Gene3D - 133 304 IPR027417 -
Aip04g03680 840 MobiDBLite consensus disorder prediction 824 840 - -
Aip04g03680 840 MobiDBLite consensus disorder prediction 821 840 - -
Aip04g03680 840 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 147 411 IPR027417 -
Aip04g03680 840 Gene3D - 402 488 IPR036388 -
Aip04g03680 840 PANTHER DISEASE RESISTANCE PROTEIN RP 147 819 IPR044974 GO:0006952
Aip04g03680 840 Gene3D - 12 132 IPR027417 -
Aip04g03680 840 Gene3D Ribonuclease Inhibitor 489 814 IPR032675 -
Aip04g03680 840 Pfam NB-ARC domain 156 399 IPR002182 GO:0043531
Aip04g03680 840 Pfam NB-ARC domain 47 129 IPR002182 GO:0043531
Aip04g03680 840 PRINTS Disease resistance protein signature 175 190 - -
Aip04g03680 840 PRINTS Disease resistance protein signature 249 263 - -
Aip04g03680 840 PRINTS Disease resistance protein signature 344 358 - -
Aip04g03680 840 PANTHER - 147 819 - -
Aip04g03680 840 Gene3D - 309 401 IPR042197 -
Aip04g03680 840 SUPERFAMILY L domain-like 478 812 - -
Aip04g03680 840 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 15 139 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip04g03680 Aip-Chr4 131283463 131285985 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip04g03680 176 507 WRKY Transcription Factor Family AT5G45050 24.713 4.27e-10 61.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip04g03680 - - aip:107637432 1642.09