Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip04g03679 ATGGCCGATGATGGACAGGCTGGCGCATCCTCGTCGTCTTTGTCGCCGGCCCCGTGGTTGTGGGCGATGTCATCCTTATCAGAAGGAGGCATGTACGATGTTTTTCTGAACTTTAGAGGCGAGGACACAAGGTTCTTATTCACAGATTATCTCTATCATGGCCTGGCCGATGTAAAAAAACTCCAAGTATTCAGGGATGATCCGGGTCTGGAACTAGGTGAGGCAATTAAACCTACTCTGATGGAAGCAATTAAAAGATCAAGGATTCATATTGTTGTGATGAGTGAAAACTATGTATCTTCCTCATGGTGCCTCCTGGAACTAGAACAGATGCTCAAGTACTCCAACAATGGAACAAAACGCCCCGTTTTCCCAGTTTTTTATCACGTGACGCCCGCAGAAGTGAGACATCAGATTAGCACCAAATCTAAGGAAGCCATGCAGAAACATGAAAAGAGAGAAGGCAAAGACAAGGCGGAAGCGTGGAAGTTGGCTTTATCTACCGCTTGCGGGCTGAGCGGACAACACGTTCAAGAGAAGCATGAAGAGAAGTATGAAACCGAGATCATTGGCAAGATTGCTGAACAAGTCTCTGCAAAACTTCTAGAGATCAAGCAAAAATTAAATAGATTTGATTTTCAATTTGAAGTGGTCGAATCACTTTTGAACCTAGAATCTCGTGACACTGTACGTGTGGTGGGAATTTATGAAGATCAAAGAGAAAAGAGTTACATAACAACATTTGCATTTGAGCTATACTATAAGATCAAAGATGAGTTCAGAGCGGCAAGTTTTGTTGTTGATGTTGGTAAACAGTTAATGAAAAACACCGTTGATGATGGCTTGGAATATCTTAAAAAGGAGCTTCTTTCTGATATGGTTGTAGAGACCAAGGAGGAGCTGCAGCATAAAAGAGTGCTTCTGGTTCTGGAAGGAGTTGATAGTGAAGAGCATTTGGAGTTGCTAGCGGGAATGGGAATAGTTGATTGGTTTGGTCCTGGTAGTAGGATCATCATAACAACAGAAAACAAAGATCTCTTTCAGAATTATTCTCCTGTAATGAATGGTGTTGAGCTTGAGACACATTGCATTCGTGAAGGTGAAATCGTTGGCAGCGATGGGATAGTGAAGGAAAAGCATGTAGTGGGATTTGTAAAAGATTTCATAGATGTAATTAATCAATTGAGGGAAGAAGATTCAAAGAGGAGGAATGTTGTTTCCATTGTTGGTATGGGTGGGTCAGGAAAGACTACTCTTGCCCAAAAGATCTATGGTAGCAAAGTGGTGAGGGAGGTATTCCCTTTGCGTGCATGGGCAACTGTTTCCAAAGATTACAGAGAAAAGGAAGTTTTCTCGAGCCTTTTTCGTTGTCTGATGCCATCTAAGCCTATACCTGAAAACGAAGAAGAGTTGAAGTCCGAGGTAAGAAAATGTTTGAATGAGAAAAGGAGAAAGTACTTGGTAGTACTCGATGATGTGTGGGACATTCAAGTGTGGGACAAGCTGAAGGATTATGTTCTCCCAAATAAGAACAATGGGAGCAGGGTATTGGTGACTACACGAAATGATCAGGTGGCAAACTATGCAAGGTCAAAGGAGCCCCACCACAAACTTCTCCTCTTGAATGAAGAAGAAAGTTGGGAATTGATTTACAACGAGGTGTTTGGTGGAGAAGAGTGTCCTCCTGATTTAGAGCCTATTGCTAAATCAATTGCTGAAGGTTGCAAGGGTTTACCATTGGCTATCAAAACTACAGCCGGGATTGTAGCAAAGAGGGAGAGATCAGAGGATGAATGGAAAAAAATCAAGAATCTGCTCCCTCATTGGTGTGTTGCTGAAGACAAGGAAGGTAAGAAGATGATGGAGATATTGAAGCTTAGCTATGATGATCTGTCTGAGAAAATGAAGCCATGCTTCTTATATCTTGGGGTGTTTCCTGAAGATGTAGAGATTCGGGTGAGAGACTTAATCGAAGTATGGATAGCAGAAAGGTTGATAGAGCCAATCCAGAGTGGAAGATCAAAAGTAGCACCAGAACCTGAAGATATTGGTGAGCAATACTTGAAGGAACTAGTGGATCGTAACTTGGTACAAGTGGCCAGTAGGAGGAGTGACGGGAAAGGCGTCAAAACTTGTAAGATCCACGATCTTATTCGGGAATTGTGTATTTCAGAGAGTAACAGCCCTCATAACGGTAACAATAATGCTCGTAGGTTGTCCTTTCCAAGGGATATAGGATCCTATGCATGTTCAGTAACATGTCATCAATCATGCACTTATTCCTTGTTCATTTATGGAGATGTCAAGGGGTGGTCACATCATATTCCACAAGACTGTCGAGTTAATGTGCTATATTTTGAAGGATGGATTGATGATCTAAGTCATCTAACTGATGAAAAGAATGTTGAGAATTTGAAGGAGTTGAAAAGTGTCAAGTTCTTGAAAATAGATATTTTTTACCCAAATGAGCTAAGTAAGCTTCAGAGCATACAAACATTACATATAATGGACGATGAAACTCCCAAGGACTTCAGAGCAGACCATGGAGTGAGGCTATTGACAAGATTGTTGAAAGGGTCACAAAAAGACTTCCTCCCTTGCCTCTGCATATTGATCGTCCCCTTGGATGTGATTCTGAACTTAAACTGGCGGAATTACTTTTAG 2664 0.4167 MADDGQAGASSSSLSPAPWLWAMSSLSEGGMYDVFLNFRGEDTRFLFTDYLYHGLADVKKLQVFRDDPGLELGEAIKPTLMEAIKRSRIHIVVMSENYVSSSWCLLELEQMLKYSNNGTKRPVFPVFYHVTPAEVRHQISTKSKEAMQKHEKREGKDKAEAWKLALSTACGLSGQHVQEKHEEKYETEIIGKIAEQVSAKLLEIKQKLNRFDFQFEVVESLLNLESRDTVRVVGIYEDQREKSYITTFAFELYYKIKDEFRAASFVVDVGKQLMKNTVDDGLEYLKKELLSDMVVETKEELQHKRVLLVLEGVDSEEHLELLAGMGIVDWFGPGSRIIITTENKDLFQNYSPVMNGVELETHCIREGEIVGSDGIVKEKHVVGFVKDFIDVINQLREEDSKRRNVVSIVGMGGSGKTTLAQKIYGSKVVREVFPLRAWATVSKDYREKEVFSSLFRCLMPSKPIPENEEELKSEVRKCLNEKRRKYLVVLDDVWDIQVWDKLKDYVLPNKNNGSRVLVTTRNDQVANYARSKEPHHKLLLLNEEESWELIYNEVFGGEECPPDLEPIAKSIAEGCKGLPLAIKTTAGIVAKRERSEDEWKKIKNLLPHWCVAEDKEGKKMMEILKLSYDDLSEKMKPCFLYLGVFPEDVEIRVRDLIEVWIAERLIEPIQSGRSKVAPEPEDIGEQYLKELVDRNLVQVASRRSDGKGVKTCKIHDLIRELCISESNSPHNGNNNARRLSFPRDIGSYACSVTCHQSCTYSLFIYGDVKGWSHHIPQDCRVNVLYFEGWIDDLSHLTDEKNVENLKELKSVKFLKIDIFYPNELSKLQSIQTLHIMDDETPKDFRADHGVRLLTRLLKGSQKDFLPCLCILIVPLDVILNLNWRNYF 887
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip04g03679 887 PRINTS Disease resistance protein signature 405 420 - -
Aip04g03679 887 PRINTS Disease resistance protein signature 480 494 - -
Aip04g03679 887 PRINTS Disease resistance protein signature 575 589 - -
Aip04g03679 887 PANTHER - 363 844 - -
Aip04g03679 887 SUPERFAMILY Toll/Interleukin receptor TIR domain 24 174 IPR035897 -
Aip04g03679 887 SMART till_3 31 172 IPR000157 GO:0007165
Aip04g03679 887 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 376 642 IPR027417 -
Aip04g03679 887 Pfam NB-ARC domain 390 630 IPR002182 GO:0043531
Aip04g03679 887 PANTHER DISEASE RESISTANCE PROTEIN RP 363 844 IPR044974 GO:0006952
Aip04g03679 887 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 246 354 IPR027417 -
Aip04g03679 887 Gene3D - 375 535 IPR027417 -
Aip04g03679 887 Gene3D - 633 723 IPR036388 -
Aip04g03679 887 Gene3D - 30 209 IPR035897 -
Aip04g03679 887 Gene3D - 246 358 IPR027417 -
Aip04g03679 887 Gene3D - 540 632 IPR042197 -
Aip04g03679 887 Pfam TIR domain 32 206 IPR000157 GO:0007165
Aip04g03679 887 ProSiteProfiles TIR domain profile. 30 201 IPR000157 GO:0007165
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip04g03679 Aip-Chr4 131280015 131283436 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip04g03679 81 347 WRKY Transcription Factor Family AT4G12020 27.599 7.64e-17 84.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip04g03679 - - aip:107637432 1117.83