Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip04g03675 ATGGCAGGTTCATCATCAGATCACGATGCGACACCATTGTCATATTTCAAGTATGATGTTTTCCTGAGTTTTAGAGGCTACACAAGGCTCAGATTCACAGACACACTCTATCATGCTTTGGTCAACAAAAGAATCGAGACTTTCAGAGATAGAGAGAATCTGAGAACAGGCGAGGAACTCGAAGGTGCTCTTGTTGAAGCAATTGAAAGATCAAGGATGTCAGTTCTTATACTGTGTGATGAGTATCCAACTTCCAAGTGGTGCCTTGATGAACTCCTCAAGATCATGGAGTGTTCCCACAACGGAACAAAGCGACCGGTGTTACCAGTTTATTACTATGTGGAAAAATCAGATGTGCAGTACCAGCCCAATGAATATGCAAAAGCCATGACTAATCATCAAGAAAAAGGCAGATACAATCACAAGTTGGAAGCATGGAGGTCAGCCTTGTCTCAAGTTGGCAAGATTTATGGTCCACTCTGTAATCAGAATACACCTTGGGGTGTGATTATTGACAACATTGTTGAAGAGGTCTCAAGGAGACTTCCTTCTATTCCTTTGTATATTGATCGCCCACTTGGATTAGATTCTCAGCTTGAAGAGGCGAAATCACTTCTAGAGATTGATTCTCATTCTGCCTGTTTCATGCTGGGAATTCATGGAGATGGTGAACTAAGAAAATTTGTTTTGGAGCTATATAATGAGATTAGAGGTCATTTTAAAGCTGGAAGCTTTCTTTCTAATGTTAGTGAAAAAACAAAAAGAGGTGGCTTAGAAGGTCTGCAAAAAACGCTTTTGTCTGAGATGGGAGAGGAAGTGAAGACTGAGTTAGGAAGCATATCCAGAGGATCCTCTGAAATTAGACAAAGGCTTGGCCAAAAGAGAGTTCTTCTAGTTTTGGATGATGTTGATAGCATACAACCATTGGAATCATTAGCAGGGGCAGGTGATTGGTTTGGTCCTGGTAGTAGGATCATTACAACAACAAGAAATGAAGGTGTGCTAGATAAGCATGCATTAAAAAAAGGTGTTGAGATTAAGAAATTTTGCTTCGATGAAGGTGAATTCGAAGGCATGGAATCAGTTGACAAACAAAAGAGGTATGTTGTGGAAGAAGATGTAGTAGGTTTTGAGGATGACATTGCCATTTTAATTAAGAAGTTGCAAGACGAGGATTCACACAATAATGTTGTCTCCATCATTGGTATGGGTGGGTTGGGTAAGACTACTCTTGCTCGAAAGATCTACAGCAGCAAAGAGGTCAAGAAATTGTTCCCTTATCATGCATGGAGTTATGTTTCCAAAGACTACAACAAAAAGGAAGTTTTGTTGAGAATTCTTGACTGCTTGATGAGTTCAACATCTAAATTTAAAGATTCAAGTGAGGAGGTTTTGAAGAATGAAGTGGGAAAGTGTTTGAAATGGAGCAAATACCTTGTGGTGCTTGATGATATCTGGGAACCTGAAGCATGGGACGATTTGAGGGATACCTTTCCAAACCATAAAAATGGCAGCAAAATACTAATAACAAGTCGTAATGAAATGGTGGCAAACTATACAAATCCAAGTAAGCCTCCTCACTTTCTTCGCTTACTTGACCAAAAAGAAAGTTGGGAATTGTTTTGCAAGAAAGTGTTTTTGAATGAAGAGTGTCCTTCAAATCTAGACCCCCTTGGTAGATCAATTGTCGAAAGTTGTAAGGGTCTACCACTTGCTATCATCACCTTAGCAGGGCTTGTTGCCAAGAGAAAAAGGACAGAACAAGAGTGGTTGAGAATTAAGGGCTATGTCAGttggcatcttgctcaagacaagaccaaagtcatggatgtactaaaacttagctacgactatttgcctagaagattgaagccatgttttctgtaccttggaatctaccctgaagattatgagatccctgcgaaagaacttatccagttatggatagccgaagggttcatacaaccaCATGAAAGTGGAACTTCAAATGCACCAGAACCAGAAGATGTGGGTGAAGATTACTTGGGTGAGTTGGTAGATCGTAGCTTGATACAAGTAAGTAGTACAAGGAGCTATGGAGGTGTGAAAACATGTAAGATTCATGATCTCCTCCGCGAACTCTGCATATTAGAAAGCAAAGCTAATAACTCCTTAGAGGTTTTCACAGAGTCCAACATCCATGCCAACAACACAAGCAATCCTCATAGATTGTCTTTTCTGTGCAATGCACAATCTTATGTCTCCTCAGTCAAACCGGACACTCGTTCGTTGTTCTTTTTCGCCGGAGCCGGAAGGACGAACTGCAAAGAAAGTTGTCTTAAAAATTTCCAGTCTATACAAGTGCTACACTTGCAAGATCAAGTGTATTTCACATCAGATTCTAATGATCTGGAAACAATGATCCACCTGAAGTACTTGAGACTAAAGCGTCCGGCTAATAGAAAGGTATACGTTCCATATTATATCTGGAACCTTCCAAAGTTAGAAACACTGGATTTGGAGGTTTGGGCGCCATTCACTATCCTAGATGGATTTTGGAAGCTTGATCGACTGAGACATGTTTATGTGAGATGCAGCACAAAGCTACCTCCAGCAGCACCACAAGCACCAACAATATTGTGGAACCTCCAAACCCTCTATGGAGTGGCTCTTGATCAAACAATAGCATCTCTGTTCAGCAACAACATATTTCCCAACTTGAGAAAACTGGCCTTGAAGTACGGTTCACGTAAAGATGATACAGATTCTCTGTTCTCAAGGTTTAGCAAGAAGAAAACATACCAGGCTTGTACAAGTGATTATTCTTCTGCAACACTGCATGAACTATTAAAGAGCCTCAAGTACCTAAGCAAGCTCCGTAGGCTAAAACTCCTCTGCAATGATTTTTGCCTATCATCAGAAGCAATAACCGCTTTCCCGCCAAATCTTATCAAGATTACCTTGTCGGGATGTGGGGAGTTGGATTCGAGAGCGATGCACAGTTTGGGGCAACTAGCCAACCTGCAAAGTTTAAGCATATATTCAGGGTCTTATGAGGTCCCTCTCTCGTGCGTGGGCGGAGGTTTCTCACGGCTTCAAGTGCTGAAACTCGAATACTCATCTGGATACAACCGGGGTGTGTTGGACGGAGGTGAAATAATGCCTCCTCTTCGGTGTTTGGTGATGAAGCAGTGTCTTCGAGTGACTGCGCTTCCTAAACAGCTCTGGTCCTTAACTACCTTACAAAAGGTGGATATTGTTGGCCCCTCCGACGAATTGGAAAGAAGCCTCCGAAATGTTGAGCTCAAGAAGGGTTGCAAGCTCACTGTAAACGGATATACAGATCTGGATGGCCTACCTCTCCGTCGCCGTCGTACGTAA 3360 0.3961 MAGSSSDHDATPLSYFKYDVFLSFRGYTRLRFTDTLYHALVNKRIETFRDRENLRTGEELEGALVEAIERSRMSVLILCDEYPTSKWCLDELLKIMECSHNGTKRPVLPVYYYVEKSDVQYQPNEYAKAMTNHQEKGRYNHKLEAWRSALSQVGKIYGPLCNQNTPWGVIIDNIVEEVSRRLPSIPLYIDRPLGLDSQLEEAKSLLEIDSHSACFMLGIHGDGELRKFVLELYNEIRGHFKAGSFLSNVSEKTKRGGLEGLQKTLLSEMGEEVKTELGSISRGSSEIRQRLGQKRVLLVLDDVDSIQPLESLAGAGDWFGPGSRIITTTRNEGVLDKHALKKGVEIKKFCFDEGEFEGMESVDKQKRYVVEEDVVGFEDDIAILIKKLQDEDSHNNVVSIIGMGGLGKTTLARKIYSSKEVKKLFPYHAWSYVSKDYNKKEVLLRILDCLMSSTSKFKDSSEEVLKNEVGKCLKWSKYLVVLDDIWEPEAWDDLRDTFPNHKNGSKILITSRNEMVANYTNPSKPPHFLRLLDQKESWELFCKKVFLNEECPSNLDPLGRSIVESCKGLPLAIITLAGLVAKRKRTEQEWLRIKGYVSWHLAQDKTKVMDVLKLSYDYLPRRLKPCFLYLGIYPEDYEIPAKELIQLWIAEGFIQPHESGTSNAPEPEDVGEDYLGELVDRSLIQVSSTRSYGGVKTCKIHDLLRELCILESKANNSLEVFTESNIHANNTSNPHRLSFLCNAQSYVSSVKPDTRSLFFFAGAGRTNCKESCLKNFQSIQVLHLQDQVYFTSDSNDLETMIHLKYLRLKRPANRKVYVPYYIWNLPKLETLDLEVWAPFTILDGFWKLDRLRHVYVRCSTKLPPAAPQAPTILWNLQTLYGVALDQTIASLFSNNIFPNLRKLALKYGSRKDDTDSLFSRFSKKKTYQACTSDYSSATLHELLKSLKYLSKLRRLKLLCNDFCLSSEAITAFPPNLIKITLSGCGELDSRAMHSLGQLANLQSLSIYSGSYEVPLSCVGGGFSRLQVLKLEYSSGYNRGVLDGGEIMPPLRCLVMKQCLRVTALPKQLWSLTTLQKVDIVGPSDELERSLRNVELKKGCKLTVNGYTDLDGLPLRRRRT 1119
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip04g03675 1119 Gene3D - 14 183 IPR035897 -
Aip04g03675 1119 Gene3D - 531 620 IPR042197 -
Aip04g03675 1119 PRINTS Disease resistance protein signature 823 839 - -
Aip04g03675 1119 PRINTS Disease resistance protein signature 472 486 - -
Aip04g03675 1119 PRINTS Disease resistance protein signature 566 580 - -
Aip04g03675 1119 PRINTS Disease resistance protein signature 397 412 - -
Aip04g03675 1119 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 181 349 IPR027417 -
Aip04g03675 1119 Pfam NB-ARC domain 205 346 IPR002182 GO:0043531
Aip04g03675 1119 Pfam NB-ARC domain 379 617 IPR002182 GO:0043531
Aip04g03675 1119 SMART till_3 17 156 IPR000157 GO:0007165
Aip04g03675 1119 PANTHER - 366 1103 - -
Aip04g03675 1119 PANTHER DISEASE RESISTANCE PROTEIN RP 366 1103 IPR044974 GO:0006952
Aip04g03675 1119 Gene3D - 184 345 IPR027417 -
Aip04g03675 1119 Gene3D - 362 524 IPR027417 -
Aip04g03675 1119 ProSiteProfiles TIR domain profile. 16 178 IPR000157 GO:0007165
Aip04g03675 1119 SUPERFAMILY RNI-like 768 1082 - -
Aip04g03675 1119 Pfam TIR domain 17 181 IPR000157 GO:0007165
Aip04g03675 1119 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 366 630 IPR027417 -
Aip04g03675 1119 Gene3D Ribonuclease Inhibitor 753 1114 IPR032675 -
Aip04g03675 1119 SUPERFAMILY Toll/Interleukin receptor TIR domain 13 158 IPR035897 -
Aip04g03675 1119 Gene3D - 621 709 IPR036388 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip04g03675 Aip-Chr4 131254065 131257642 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip04g03675 65 335 WRKY Transcription Factor Family AT4G12020 28.102 4.02e-18 88.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip04g03675 - - adu:107486176 1763.81