Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip04g03673 ATGGCTTCACACATAATTAACAATGGTCTCAAAGCATCAAATGAGATCTTTGAAGGCCAAATTCACTTGTACAAACACATGTTTGCATTCTTAGATTCTCTTTGCCTTAAGTGGTGTGTGGATCAAAGAATACCAAACATAATCCAGAACCATGGTCAACCTATGACTCTTCATGAGTTGGTTTCCAAGTTACAAGTTCCATCACTACCAGAAACACGGTATGGTGTGCACCGTTTAATGCGTTATCTTGCACACATTGGATTCTTTGACATAGTAAGAATTATCCAAGAAAATCAAGAAGAAAAGGAAGCATATGCTCTTACTTGTGTCTCAAAGCTCCTTGTTAGAGGTAGTGATCATTGTTTAGCTCCAATGGTTGACCTTGTTCTTGACCCAACTATCTCAAGTTCATACCATCAACTTGGGAAGTGGGTTCATGATGAGGGGAATCAAACACCATTTGCCATGGCATTGGGTACAGATATTTGGGACTTTCTTAACAAAAACCCTACACATATGAAATACTTCAATGATGCAACTGCTAGTGACTCTCAAATCATAAACTTGGCGTTGAGAGATCATGGTGTTGTCTTTGAAGGATTGGAATCAATTGTAGATGTTGCTGGAGGAACTGGAATGGTAGCCAAGTATATCTCTCAGAATTTTTCACATTTGAAATGCATAGTTTTTGATCTTCCACAGGTTGTGAAAAATCTTAAAGGAACCAACAATTTGAGTTATGTTGGTGGAGACATGTTTCAATCTATCCCTAAAGCTGATGCAGTTCTACTTAAGTGGATTTTACATGATTGGGATGATGATAATTGCATGAAGATATTGAAAAAATGCAAAGATGCTGTTTCTTCAAGTAATAATAAAAGAGGAAAAATAATTATTATAGATATCGTGATAGATGATGAAAAAAAGGATCAGCCTGAAATTACTCAAGCAAAGCTTCAATTGGATTTAGTGGTGACAGCATATTATAATGGAAAAGAAAGAACCAAAGAAGAATGGAAGAAACTCTTCATGGAAACAGATTGTCAAGACTATAAAATTTCACCTTTAACCGGACATATGTCTCTTATTGAGATATATATTTAA 1104 0.3569 MASHIINNGLKASNEIFEGQIHLYKHMFAFLDSLCLKWCVDQRIPNIIQNHGQPMTLHELVSKLQVPSLPETRYGVHRLMRYLAHIGFFDIVRIIQENQEEKEAYALTCVSKLLVRGSDHCLAPMVDLVLDPTISSSYHQLGKWVHDEGNQTPFAMALGTDIWDFLNKNPTHMKYFNDATASDSQIINLALRDHGVVFEGLESIVDVAGGTGMVAKYISQNFSHLKCIVFDLPQVVKNLKGTNNLSYVGGDMFQSIPKADAVLLKWILHDWDDDNCMKILKKCKDAVSSSNNKRGKIIIIDIVIDDEKKDQPEITQAKLQLDLVVTAYYNGKERTKEEWKKLFMETDCQDYKISPLTGHMSLIEIYI 367
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip04g03673 367 SUPERFAMILY "Winged helix" DNA-binding domain 13 118 IPR036390 -
Aip04g03673 367 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 24 367 IPR016461 GO:0008168
Aip04g03673 367 PANTHER O-METHYLTRANSFERASE 8 366 IPR016461 GO:0008168
Aip04g03673 367 PANTHER FLAVONOID 4'-O-METHYLTRANSFERASE 8 366 - -
Aip04g03673 367 Pfam Dimerisation domain 35 84 IPR012967 GO:0046983
Aip04g03673 367 Pfam O-methyltransferase domain 138 345 IPR001077 GO:0008171
Aip04g03673 367 PIRSF O-mtase 4 367 IPR016461 GO:0008168
Aip04g03673 367 Gene3D Vaccinia Virus protein VP39 116 366 IPR029063 -
Aip04g03673 367 Gene3D - 7 114 IPR036388 -
Aip04g03673 367 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 119 365 IPR029063 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip04g03673 Aip-Chr4 131215290 131219540 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip04g03673 34 365 Monolignol Biosynthesis Gene Families AT5G54160 29.940 6.42e-44 154
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip04g03673 K22588 K13262 ag:AAC49926 425.631