Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip04g03672 ATGGCTTCAAATTCATTATCCACTAATGGCCGTGAAGAAGCAAATAACATCTTTGAAGGTCAAGTTCATTTGTACAAACACCTTTTTGCCTTCTTTGACTCTCTTTGCCTTAAGTGGTGTGTTGACCAAAGCATACCAAACATAATCCACAGCCACGGTCAACCTATGACTCTTCATGAGTTGGTGTCAAAGTTACAAGTTCCAACGGCTAAGATTAGTGGTGTGCATCGCTTAATGCGTTATCTTGCACACATTGGATTCTTTGAAGTAGTTAGAATCCAAGAAAATCAAGAAGAAAAGGAAGCATATGCTCTCACTAATTCATCGGAGCTTCTTGTTCGAGGCACCAACCATTGTTTATCTTCTATGGTTGACTTTGTTCTTGACCCCTCTATTTTAACATCGAACCACCACTTGGGGAAGTGGATTCATGATGATGGAGATCAACCACCATTTGCCTTGGCCTTAGGAACAGGAATTTGGGACTTTCTTAGCAAGAGTCCTACACATATGACATCCTTCAATGATGCAACTGCTAGTGACTCTCAAATCATAAACCTGGCATTGAAAGATCATGGTGTTATCTTTGAAGGGTTGGAATCAATTGTAGATGTTGCTGGAGGAACTGGAATGGTAGCCAAGTATATCTCTCACACATTTCCACATTTGAAATGCATAGTTTTTGACCTTCCACAGGTTGTAGAAAATCTTAAGGGAACCAATAATTTGAGTTATGTTGGTGGGGACATGTTTCAATCTATCCCTAAGGCTGATGCAGTTTTACTTAAGTGGATTTTACATGATTGGGGTGACGATGATTGCATGAAGATATTGAACAAGTGCAAAGATGCAATTTCAAATAATAAGAAAAGAGGAAAAATAATTATCATAGATATTGTTATAGACGATGGAAAGCAAGATCACCCTGATATTACTCAAGCAAAACTTCAGATGGATTTAACTGTCACAACATATTATAATGGAAAAGAGAGAACTACACAAGAATGGAAGAAACTTTTTACAGAGGCAAATTGTCAAGATTACAAAATTTCACCTTTAACAGGATATATGTCTCTTATCGAGGTTTATCCCTGA 1095 0.3772 MASNSLSTNGREEANNIFEGQVHLYKHLFAFFDSLCLKWCVDQSIPNIIHSHGQPMTLHELVSKLQVPTAKISGVHRLMRYLAHIGFFEVVRIQENQEEKEAYALTNSSELLVRGTNHCLSSMVDFVLDPSILTSNHHLGKWIHDDGDQPPFALALGTGIWDFLSKSPTHMTSFNDATASDSQIINLALKDHGVIFEGLESIVDVAGGTGMVAKYISHTFPHLKCIVFDLPQVVENLKGTNNLSYVGGDMFQSIPKADAVLLKWILHDWGDDDCMKILNKCKDAISNNKKRGKIIIIDIVIDDGKQDHPDITQAKLQMDLTVTTYYNGKERTTQEWKKLFTEANCQDYKISPLTGYMSLIEVYP 364
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip04g03672 364 Pfam O-methyltransferase domain 137 343 IPR001077 GO:0008171
Aip04g03672 364 Gene3D - 6 112 IPR036388 -
Aip04g03672 364 Gene3D Vaccinia Virus protein VP39 114 364 IPR029063 -
Aip04g03672 364 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 118 363 IPR029063 -
Aip04g03672 364 SUPERFAMILY "Winged helix" DNA-binding domain 16 115 IPR036390 -
Aip04g03672 364 PANTHER O-METHYLTRANSFERASE 7 363 IPR016461 GO:0008168
Aip04g03672 364 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 25 364 IPR016461 GO:0008168
Aip04g03672 364 PANTHER FLAVONOID 4'-O-METHYLTRANSFERASE 7 363 - -
Aip04g03672 364 PIRSF O-mtase 1 364 IPR016461 GO:0008168
Aip04g03672 364 Pfam Dimerisation domain 36 83 IPR012967 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip04g03672 Aip-Chr4 131190529 131192884 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip04g03672 35 362 Monolignol Biosynthesis Gene Families AT5G54160 29.129 7.06e-38 137
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip04g03672 K22588 K13262 gmx:100813225 421.779