Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip04g03671 ATGGCAAGTTTTCAGTTTCTGAGTTTGCTGATTGTTGTTTCAGTTTTGAGTTTTTGCTATGGAGACAGCAATGACATGAATAATGTTCAGCTGAATGATGATGTTCTTGGCCTAATTGTGTTCAAATCAGACCTCCATGACCCTTCTTCGTCTCTTGCTTCATGGAATGAAGATGATTCAAGTGCTTGTTCATGGAACCGGGTTCAGTGCAATCCAGCAACAGGAAGAGTCACTGAGATCAATCTTGATGGGTTGGGATTATCTGGAAGAATTGGAAGAGGCCTTGAGAAGTTGCAGCATCTAATGGTATTGTCTCTTTCTCATAACAATTTTAATGGTAGCATTACTCCTTCACTTACACTTTCCAGCACCATTCAGAGTCTTAATCTAAGTCACAATGGCTTCTCTGGTCAAATACCAACTTCATTTCTTAATATGAGTTCAATTAGGTCTCTTGATCTTTCTCACAACTCATTCTCAGGACAAATCCCTCAAAGTTTCTTTGACAGTTGCAATTCCCTTCACTACTTTTCTTTGTCCAATAACATGTTTGAAGGACAAATTCCTAGCACAATCTCTAGATGTTCTTCATTGAATAGCATTGATCTTTCGAATAACCGTTTCTCCGGTTATGTTGATTTTGCTGCTGTTTGGTCATTGAGTAGGCTTAGGCAATTGGATCTTTCAAGCAATGCCTTATCAGGTTCTTTGCCTAATGGAATTTCTTCAATTCATAACTTGAAAGAGATCTTGTTAAGGAAAAACCAGTTTTCAGGTCCATTGCCTAATGATATTGGACTCTGTCTTCATTTGAATAAGCTTGATTTGAGTGATAATCAGTTCAATGGGTTGTTACCAGAGTCATTGAATAGGCTTAAATCTCTGAGCTATTTAAGTACATCGAAGAATATTTTCGCCGGCGAGTTTCCTCAATGGATTGGTACCATGACTAGTCTTGAACACTTGGATCTTTCCAACAATCAGTTCATTGGAACTATTCCGGATTCCATTGGAGAATTGAGATCATTGGCATATCTGAGTGTTGCGAATAACAAGCTCGAAGGGAACATTCCGGCTTCATTAGTTTCTTGCACAGAGTTATCAGTTATCAAGCTTAGAGGGAATGGTTTCAATGGAAGCATACCAGAGGCCTTGTTTGGCCTTGAATTGGAGGAAATAGATTTTTCTCATAATCATTTAACAGGTCCAATCCCAGCTGGGTCAAGCAGGCTATTGGAAAGTCTCATCAAATTGGATCTCTCAGAGAATAATCTTCAGGGGAATATCCCTGCTGAAATGGGGCTACTTTCAAAGCTTAGATACTTGAATTTGTCTTGGAATGATCTTCATTCTCATATGCCTCCAGAGTTTGGTCTGCTTCAGAATCTAACAGTCTTGGATCTTCGAAACAGCGCCTTGATCGGCTCAGTTCCATCCGATATATGTGATTCGGGTAACTTGGCTGTTCTTCAACTTGATGGAAATTCATTGGAGGGGTCTATTCCAGAGCAGATTGGAAATTGTTCATCACTTTACATGCTGAGTTTGTGTCACAATAATTTGAGTGGTTCAATCCCAAAGTCCATGTCAAGGCTAAGCAAGCTCAAGATTCTGAGATTGGAGTTCAATGAACTGAGTGGAGAGATACCAATGGAGCTTGGAATGCTTCAAAACCTTCTTGCTGTGAACATATCATACAACAAGCTCACAGGTAGGCTTCCAACAGGAAGCATATTTCAGAACTTGGACAAGAGTTCCTTGGAAGGAAACTATGGTCTTTGTTCACCATTGCTGAAAGGTCCATGTATGATGAATGTACCAAAGCCACTAGTTCTTGATCCAAATGCTTACAACAACCAAATAGGCTCTCCTAGGCAAAGAAATGAATCATCTATGGCTACTGGCCTAAGTCATCACCACAGATTCCTTAGTGTTTCGGCCATTGTCGCGATTGCAGCCTCATTTGTGATCATATTAGGAGTTATTGCTATTAGCCTACTCAATGTTTCTGTAAGGAGAAGGTTAAAATTTGTGGACAATGCCTTGGAAAGCATGTGTTCGAGTTCTTCAAGATCCGGAAGTCCAGCCACAGGGAAGCTAATTCTGCTTGATTCACAGTCCGGCTCGCCGGATTGGATCAGCAATCCGGAATCCTTGCTCAACAAGGCATCAGAGATTGGTGAAGGAGTGTTTGGAACAGTGTACAAAGTTCCATTGGGATCACATGGAAGAATTGTTGCAATCAAGAAACTCATAACCTCAAACATAATCCAATATCCTGAAGATTTCGACAGAGAAGTTAGGATCCTTGGAAAAGCAAGGCATCCAAATTTGATTGCATTGAAAGGTTACTATTGGACACCTCAAATTCAGCTTCTAGTAACTGAGTATGCATCAAATGGTAGCCTCCAATCCAAGCTTCATGAGAGAATCTCTTCAATTCCTCCACTTTCTTGGGCTAATAGGTTCAAGATCTTGCTTGGAACAGCAAAGGGTCTTGCACATTTGCACCAGTCATTCCGGCCACCCATAATTCACTACAACATAAAGCCAAGCAACATCCTTCTTGACGAAAACTTCAATCCGAAGATATCAGATTTCGGGTTGGCAAGGCTTCTAACAAAGCTTGACAAGCATGTTATGAGCAACAGGTTTCAGAGTGCATTAGGCTATGTTGCACCAGAGTTAGCATGCCAGAGCTTAAGGGTGAATGAGAAATGTGATGTGTATGGTTTTGGAGTGATGATTCTTGAGCTTGTGACAGGTAGAAGGCCAGTGGAGTATGGTGAGGACAATGTGCTAATACTCAATGATCATGTTAGAGTTCTTCTTGAGCAAGGGAATGTGTTGGAGTGTGTTGATCCATGCATGAATGAGTATCCAGAAGATGAAGTTTTGCCAGTTTTAAAGCTTGCAATGGTTTGCACTTCTCAGATACCTTCTAGCAGGCCTTCTATGGCAGAAGTTGTTCAAATTCTTCAAGTCATTAAGACTCCAGTTCCTCAAAGGATGGAAGTTTTCTGA 3024 0.4071 MASFQFLSLLIVVSVLSFCYGDSNDMNNVQLNDDVLGLIVFKSDLHDPSSSLASWNEDDSSACSWNRVQCNPATGRVTEINLDGLGLSGRIGRGLEKLQHLMVLSLSHNNFNGSITPSLTLSSTIQSLNLSHNGFSGQIPTSFLNMSSIRSLDLSHNSFSGQIPQSFFDSCNSLHYFSLSNNMFEGQIPSTISRCSSLNSIDLSNNRFSGYVDFAAVWSLSRLRQLDLSSNALSGSLPNGISSIHNLKEILLRKNQFSGPLPNDIGLCLHLNKLDLSDNQFNGLLPESLNRLKSLSYLSTSKNIFAGEFPQWIGTMTSLEHLDLSNNQFIGTIPDSIGELRSLAYLSVANNKLEGNIPASLVSCTELSVIKLRGNGFNGSIPEALFGLELEEIDFSHNHLTGPIPAGSSRLLESLIKLDLSENNLQGNIPAEMGLLSKLRYLNLSWNDLHSHMPPEFGLLQNLTVLDLRNSALIGSVPSDICDSGNLAVLQLDGNSLEGSIPEQIGNCSSLYMLSLCHNNLSGSIPKSMSRLSKLKILRLEFNELSGEIPMELGMLQNLLAVNISYNKLTGRLPTGSIFQNLDKSSLEGNYGLCSPLLKGPCMMNVPKPLVLDPNAYNNQIGSPRQRNESSMATGLSHHHRFLSVSAIVAIAASFVIILGVIAISLLNVSVRRRLKFVDNALESMCSSSSRSGSPATGKLILLDSQSGSPDWISNPESLLNKASEIGEGVFGTVYKVPLGSHGRIVAIKKLITSNIIQYPEDFDREVRILGKARHPNLIALKGYYWTPQIQLLVTEYASNGSLQSKLHERISSIPPLSWANRFKILLGTAKGLAHLHQSFRPPIIHYNIKPSNILLDENFNPKISDFGLARLLTKLDKHVMSNRFQSALGYVAPELACQSLRVNEKCDVYGFGVMILELVTGRRPVEYGEDNVLILNDHVRVLLEQGNVLECVDPCMNEYPEDEVLPVLKLAMVCTSQIPSSRPSMAEVVQILQVIKTPVPQRMEVF 1007
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip04g03671 1007 Gene3D Ribonuclease Inhibitor 144 214 IPR032675 -
Aip04g03671 1007 SUPERFAMILY Protein kinase-like (PK-like) 720 1001 IPR011009 -
Aip04g03671 1007 Gene3D Ribonuclease Inhibitor 35 143 IPR032675 -
Aip04g03671 1007 Gene3D Ribonuclease Inhibitor 316 605 IPR032675 -
Aip04g03671 1007 ProSitePatterns Protein kinases ATP-binding region signature. 726 750 IPR017441 GO:0005524
Aip04g03671 1007 Pfam Leucine rich repeat N-terminal domain 32 71 IPR013210 -
Aip04g03671 1007 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 6 1005 - -
Aip04g03671 1007 Gene3D Phosphorylase Kinase; domain 1 720 801 - -
Aip04g03671 1007 ProSiteProfiles Leucine-rich repeat profile. 318 340 IPR001611 GO:0005515
Aip04g03671 1007 Gene3D Ribonuclease Inhibitor 215 311 IPR032675 -
Aip04g03671 1007 Pfam Leucine rich repeat 486 545 IPR001611 GO:0005515
Aip04g03671 1007 Pfam Leucine rich repeat 148 208 IPR001611 GO:0005515
Aip04g03671 1007 Pfam Leucine rich repeat 390 449 IPR001611 GO:0005515
Aip04g03671 1007 Gene3D Transferase(Phosphotransferase) domain 1 802 1004 - -
Aip04g03671 1007 CDD STKc_IRAK 726 994 - -
Aip04g03671 1007 Pfam Leucine Rich Repeat 318 340 IPR001611 GO:0005515
Aip04g03671 1007 Pfam Protein kinase domain 722 991 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip04g03671 1007 SUPERFAMILY RNI-like 333 583 - -
Aip04g03671 1007 SUPERFAMILY L domain-like 49 402 - -
Aip04g03671 1007 PANTHER BNAA09G02190D PROTEIN 6 1005 - -
Aip04g03671 1007 SMART LRR_typ_2 316 340 IPR003591 -
Aip04g03671 1007 SMART LRR_typ_2 146 170 IPR003591 -
Aip04g03671 1007 SMART LRR_typ_2 412 435 IPR003591 -
Aip04g03671 1007 SMART LRR_typ_2 98 122 IPR003591 -
Aip04g03671 1007 SMART LRR_typ_2 220 244 IPR003591 -
Aip04g03671 1007 SMART LRR_typ_2 532 558 IPR003591 -
Aip04g03671 1007 SMART LRR_typ_2 460 484 IPR003591 -
Aip04g03671 1007 SMART LRR_typ_2 436 459 IPR003591 -
Aip04g03671 1007 ProSiteProfiles Protein kinase domain profile. 720 996 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip04g03671 Aip-Chr4 131177731 131181357 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip04g03671 1 1004 Receptor kinase-like Gene Family AT3G28040 63.708 0.0 1256
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VII-1 Aip04g03671 Pkinase 1.2e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip04g03671 - - gmx:100795810 1581.23