Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip04g03667 ATGGCTTCACACATAATTAACAATGGTCTCAAAGCATCAAATGAGATCTTTGAAGGCCAAATTCACTTGTACAAACACATGTTTGCATTCTTAGATTCTCTTTGCCTTAAGTGGTGTGTGGATCAAAGAATACCAAACATAATCCAGAACCATGGTCAACCTATGACTCTTCATGAGTTGGTTTCCAAGTTACAAGTTCCATTAGCTAAGGTTAGTGGTGTGCACCGTTTAATGCGTTATCTTGCACACATTGGATTCTTTGACATTGTAAGAATTATCCAAGAAAATCAAGAAGAAAAGGAAGCATATGCTCTTACTTATGTCTCAAAGCTCCTTGTTAGAGGTAGTGATCATTGTTTAGCTCCAATGGTTGACCTTGTTCTTGACCCAACTATCTCAAGTTCATTCCAACAACTTGGGAAGTGGGTTCATGATGAGGGGAATCAAACACCATTTGCCATGGCATTGGGTACAGGATTGGAATCAATTGTAGATGTTGCTGGAGGAGCTGGAATGGTAGCCAAGTATATCTCTGAGAAATTTTCACATTTGAAATGCATAGTTTTTGATCTTCCACAGGTTGTGAAAAATCTTAAAGGAACCAACAATTTGAGTTATGTTGGTGGGGACATGTTTCAATCTATCCCTAAAGCTGATGCAGTTCTACTTAAGTGGATTTTGCATGATTGGGATGATGATAATTGCATCAAGATATTGAAAAAATGCAAAGATGTTGTTTCTTCAAGTAATAATAAAAGAGGAAAAATAATTATTATAGATATTGTGATAGATGATGAAAAAAAGGATCAACCTGAAATTACTCAAGCAAAGCTTCAATTGGATTTAGTGGTAACAGCATATTATAATGGAAAAGAAAGAACCAAAAAAGAATGGAAGAAACTCTTCATGAAAACAGATTGTCAAGACTACAAAATTTCACCTTTAACCGGACATATGTCTCTTATTGAGATATATATTTAA 981 0.3517 MASHIINNGLKASNEIFEGQIHLYKHMFAFLDSLCLKWCVDQRIPNIIQNHGQPMTLHELVSKLQVPLAKVSGVHRLMRYLAHIGFFDIVRIIQENQEEKEAYALTYVSKLLVRGSDHCLAPMVDLVLDPTISSSFQQLGKWVHDEGNQTPFAMALGTGLESIVDVAGGAGMVAKYISEKFSHLKCIVFDLPQVVKNLKGTNNLSYVGGDMFQSIPKADAVLLKWILHDWDDDNCIKILKKCKDVVSSSNNKRGKIIIIDIVIDDEKKDQPEITQAKLQLDLVVTAYYNGKERTKKEWKKLFMKTDCQDYKISPLTGHMSLIEIYI 326
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip04g03667 326 Gene3D Vaccinia Virus protein VP39 114 325 IPR029063 -
Aip04g03667 326 Pfam O-methyltransferase domain 159 303 IPR001077 GO:0008171
Aip04g03667 326 SUPERFAMILY "Winged helix" DNA-binding domain 13 116 IPR036390 -
Aip04g03667 326 Gene3D - 6 112 IPR036388 -
Aip04g03667 326 PANTHER FLAVONOID 4'-O-METHYLTRANSFERASE 158 325 - -
Aip04g03667 326 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 158 326 IPR016461 GO:0008168
Aip04g03667 326 PANTHER O-METHYLTRANSFERASE 8 159 IPR016461 GO:0008168
Aip04g03667 326 PANTHER O-METHYLTRANSFERASE 158 325 IPR016461 GO:0008168
Aip04g03667 326 PANTHER FLAVONOID 4'-O-METHYLTRANSFERASE 8 159 - -
Aip04g03667 326 Pfam Dimerisation domain 35 82 IPR012967 GO:0046983
Aip04g03667 326 PIRSF O-mtase 156 326 IPR016461 GO:0008168
Aip04g03667 326 PIRSF O-mtase 5 160 IPR016461 GO:0008168
Aip04g03667 326 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 117 324 IPR029063 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip04g03667 Aip-Chr4 131122646 131124309 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip04g03667 34 324 Monolignol Biosynthesis Gene Families AT5G54160 28.743 1.82e-32 122
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip04g03667 - K22588 ag:AAC49926 356.681