Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip04g03665 ATGGCCGATGATGGAGCGGCCGGGGCGGCGTCTTCTTCGTCGTCACCGGCACCGTGGTTGTGGGCGACGTCATCCTTATCAGAAGGAGGCATGTACGATGTTTTTCTGAACTTTAGAGGCGAGGACACAAGGTTCTTATTCACAGATTATCTCTATCATGGCCTGGCCGATGTAAAAAAACTCCAAGTATTCAGGGATGATCCGGGTCTGAAATTAGGGGTCATAGGCAAGATTGCTGAACAAGTTTCTGAAAAACTTTTAGAGATCAGGCAACAAATAAATAGATTTGTTTCTCAATTTGAAGTGGTTGAATCACTTTTGAACCTTGAGTCTTGTGATACTGTTGGTGTGATGGGAATTTATGAAGATCCTAAAATAGGCAAAAGTTACATAAGAGTATTTGCTTTTGAGCTGTACTATAAGATCAAATATAAGTTCCAAGCAGCAGGTTTCCTTGTTGATGTTAGTAAATTTCTAAGGAAAACTACTGACAATCACTTGGAAAATCTCCAAAAGGAGCTTCTTGATGATATGGATGTGAAGACTATGCAGGAGTTGGAGTATAAAAAGATGCTTCTGGTTCTGGAAGGGGTAAATAGTAAAGAGCATTTGGAGTTGCTAGTGGGAATGGGAATAAGTGATTGGTTTGGTGGTGGTAGTAGGATCCTCATAGCAACAGAAAACAGAAATCTCTTTGAGGATTGTCCTGCTGTGATGAATGGTGTTAAGCTTGAGAAACATTGCATACGCGAAGGTGAATTGGTGAAGGAAAAGATTGTGAAGGAGAAGAAGGTAGTGGGATTTGTGAAAGAATTCATCGATGTTATTAATCAACTGAAGGAAGAAGATTCAAATGGGAGGAATGTTGTTTCCATTGTTGGCATGGGTGGATCAGGAAAGACTACCCTTGCCCGAATGATCTATGACAGCAATGAGGTGAGGCAGGTATTCCCTTGCCGTGCATGGGCAACTGTTTCCAAACAGTGCATTGAAAAGGAAGTTTACAGAAACCTTCTCAAGTCTTTGAAGGTACCAAAATCTGAATATGAAATATTAAGTAAAGTGGAGTTGAAGAAAAAGGTGAAAAAATGTTTGAATGGGCAAGGGGGGAAGTATTTGATAGTGCTGGATGATGTGTGGGATAAAGAGGCGTGGAACAAGTTGGAGTGTCTTCTCCCAAAAGAGAAAAATGGGAGCAGGATATTGATGACTACGCGAAATGATAGGGTGGCAAACTATGCAATGTCAAAGGAACCTCACCATCAACTTGGCCCTTTGGATGAAGAACAAAGTTGGGAATTGTTCCGTAGCGAGGTGTTTGGTGGAGAAGAGTGTCCTTCTTATTTAGAGCCTATTGGTAAATCAATTGCCGAAAGTTGCAAGGGTTTGCCATTGGCTGTCGAAACCATAGCAGGGCTTGTCAAAGAAAGGAAGAGATCAAATACAGAGTGGCAAAGTATTAAGAATATAATTCTTAAATGGGATGATGATGATGATGATGATGATGATGATGGCGAAGATGACGATGATGATGATTATAAGAAGCCGATGACGATGAGTAGGATGATGAAGATATTGAAGACGAGCTATGATGATTTACGTCCAAAATTGAAGCGATGCTTTCTATATCTTGGGGTGTTTCCGGAAGATTGCAAGATTGCAGCAAGGGAGTTAATTGAACTATGGAATGCAGAAGGCTTGACAAAAGTAATAGAAGATGGAACTTCAAATGCATCACAGCCTGAAGACCTTGGTGAGGAACGCTTGAAGATGTTAGTGGATCGTAACTTGGTACAGGTGGTGAGTAGGAAGAGTGATGGGGAAGGCGTGAAAACATGTCGGATCCACGATCTCTTCCGGAAACTGTGCATATCACTGAATAACAAACCAGATAACAACGACAATGATTGTAGATTATTGTCCTTTCCCAGAAACGTAGGATCCTACTATGCCTGTTCAGTAGAGACATGTAATGAATCACCAACTCTTTCACTATTCTTTTATGGAGATGCAGAGGGGTGGGCCCAACATATTTCAGAAAACCGCCGTGTTAAGGTGCTGTATTTTTCTCAATGGGTAAGTAATAGTTCAAGAAGTGTTGAGTATTTGGAGAGTTTGAGTTTGACATCCGACCTCAAGTACTTGAGAATGGACTTTTCTGACTCAGATGGGTTGCATAACTTTCCAAGCTTAGAAACATTACATATACTGCACGACGGTTGGGCGATTGACCTAAGCATTGGGGGCTTAAAGAAACTGAGACATCTGTACAGTCAATGTCAGCTGAATTTATTAGGAGTTGAAGATAAAATGCAGGATCTTCAAACTCTCCCTTGTGTGACTGCCGATTCACATCTATGGTCCTTTGTCCACGGTGGCTACTTTCCCAACTTGAGAAAGCTGGCTTTAATTTTCAGTAAAAGATACCGAGACAGTTCAGCAGAGAAAAACATAAAGAGCCTGCGTGGCCTAAGCAAGCTACGTGAGCTGACACTTAAGTTTGTTCACTTTAGTGGAGTTTCATTAGATAATGCACTTCCGTCAAGTCTTACCAAGATTTCCTTGTCAGTTTTTACGAATTTGAAATCCAAGGACATGAATACCTTGGGACTAATGCCCAAGCTTCAAATTCTAAAATTGACTTGGGGAAGTTGTGCCGAAGAAACTCTTGATATTGGTAGTGCTGGGAGCTTTCCGTGTCTTGAGGTGTTCATCATGAGACAGGTGAGAAGTGTCGCATATCTTAAATCAGGACAAGGTGCGATGCCTCATCTTCGACGTGCGGTCTTCTGTTACTGCCCTGACTTGAAGGAGGTCACTCAACGAATGCGTTCCTTGGGTAGTAACTTGGAATTTTTAAACGACGTGATTGATTTGTGTGAGACATTTGATATCAATGTCACTGCTTCCTCCCAAAAGGAGAACTCTCCATAA 2934 0.4155 MADDGAAGAASSSSSPAPWLWATSSLSEGGMYDVFLNFRGEDTRFLFTDYLYHGLADVKKLQVFRDDPGLKLGVIGKIAEQVSEKLLEIRQQINRFVSQFEVVESLLNLESCDTVGVMGIYEDPKIGKSYIRVFAFELYYKIKYKFQAAGFLVDVSKFLRKTTDNHLENLQKELLDDMDVKTMQELEYKKMLLVLEGVNSKEHLELLVGMGISDWFGGGSRILIATENRNLFEDCPAVMNGVKLEKHCIREGELVKEKIVKEKKVVGFVKEFIDVINQLKEEDSNGRNVVSIVGMGGSGKTTLARMIYDSNEVRQVFPCRAWATVSKQCIEKEVYRNLLKSLKVPKSEYEILSKVELKKKVKKCLNGQGGKYLIVLDDVWDKEAWNKLECLLPKEKNGSRILMTTRNDRVANYAMSKEPHHQLGPLDEEQSWELFRSEVFGGEECPSYLEPIGKSIAESCKGLPLAVETIAGLVKERKRSNTEWQSIKNIILKWDDDDDDDDDDGEDDDDDDYKKPMTMSRMMKILKTSYDDLRPKLKRCFLYLGVFPEDCKIAARELIELWNAEGLTKVIEDGTSNASQPEDLGEERLKMLVDRNLVQVVSRKSDGEGVKTCRIHDLFRKLCISLNNKPDNNDNDCRLLSFPRNVGSYYACSVETCNESPTLSLFFYGDAEGWAQHISENRRVKVLYFSQWVSNSSRSVEYLESLSLTSDLKYLRMDFSDSDGLHNFPSLETLHILHDGWAIDLSIGGLKKLRHLYSQCQLNLLGVEDKMQDLQTLPCVTADSHLWSFVHGGYFPNLRKLALIFSKRYRDSSAEKNIKSLRGLSKLRELTLKFVHFSGVSLDNALPSSLTKISLSVFTNLKSKDMNTLGLMPKLQILKLTWGSCAEETLDIGSAGSFPCLEVFIMRQVRSVAYLKSGQGAMPHLRRAVFCYCPDLKEVTQRMRSLGSNLEFLNDVIDLCETFDINVTASSQKENSP 977
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip04g03665 977 Gene3D - 246 419 IPR027417 -
Aip04g03665 977 Gene3D - 79 241 IPR027417 -
Aip04g03665 977 PRINTS Disease resistance protein signature 366 380 - -
Aip04g03665 977 PRINTS Disease resistance protein signature 289 304 - -
Aip04g03665 977 PRINTS Disease resistance protein signature 460 474 - -
Aip04g03665 977 Pfam NB-ARC domain 274 489 IPR002182 GO:0043531
Aip04g03665 977 Gene3D - 530 626 IPR036388 -
Aip04g03665 977 PANTHER DISEASE RESISTANCE PROTEIN RP 190 945 IPR044974 GO:0006952
Aip04g03665 977 Gene3D Ribonuclease Inhibitor 674 963 IPR032675 -
Aip04g03665 977 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 260 544 IPR027417 -
Aip04g03665 977 SUPERFAMILY Toll/Interleukin receptor TIR domain 23 73 IPR035897 -
Aip04g03665 977 MobiDBLite consensus disorder prediction 495 515 - -
Aip04g03665 977 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 101 237 IPR027417 -
Aip04g03665 977 SUPERFAMILY L domain-like 614 953 - -
Aip04g03665 977 PANTHER DISEASE RESISTANCE RPP8-LIKE PROTEIN 3-RELATED 190 945 - -
Aip04g03665 977 Gene3D - 425 529 IPR042197 -
Aip04g03665 977 MobiDBLite consensus disorder prediction 495 511 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip04g03665 Aip-Chr4 131091442 131095207 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip04g03665 99 235 WRKY Transcription Factor Family AT4G12020 32.432 2.60e-08 56.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip04g03665 - - aip:107637424 1737.62