Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip04g03664 ATGTATGATGTTTTTCTGAACTTTAGAGGCGAGGACACAAGGTTCTTATTCACAGATTATCTCTATCATGGTCTGGCCGATGTAAAAAAACTCCAAGTATTCAGGGATGATCCGGCTCTGGAACTAGGTGACGCAATTAAACCTACTCTGATGGAAGCCATTAAAAGATCTAGGATTCATATTGTTGTGATGAGTGAAAACTATGTATCTTCCTCATGGTGCCTCCTGGAACTAGAGCAGATGCTCAAGTACTCCAAAAACAATGGAAACGAACGATCCATGGTCCCAGTTTTTTATCACGTAAAGCCCGCAGAAGTGAGATATCAGATTAGCGCCAAATATAAGGAAGCCATGGAGAAACATGAAAAGAGAGAAGGCAAAGACAAGGGGGAAGCGTGGAAGTCTGCTCTATTTACAGTTTGCGACCTAAGTGGACAACACATTGTTGAGGAGCGAGATCATTATGAAACAGGGGTCATAGGCAAGATTGTTGAACAAGTGTCTGCAAAACTTCTAGAGATCAGGCAACAATTAAATAGATTTGATTCTCAATTTGGAGTGGTTGAATCACTTTTGAACCTTGAATCTTGTGATACTGTTGGTGTGGTGGGAATTTATGAAGATCCTAAAATAGGCAAAAGTTACATAAGAGTATTTGCTTTTGAGCTGTACTATAAGATCAAATATAAGTTCCAAGCAGCAGGTTTTCTTGTTGATGTTAGTGAACTTCTAAGGAAAACCACCGATGACGATCGCTTGGAAATTTTCCAAAAGGAGCTTCTTTCTGATATGGATGTGAAGACCATGCATGAGTTGAAGCATAAAAAGATGCTTCTGGTTCTGGAAGGGGTTGATAGTGAAGAGCATTTGGAGTTGCTAGTGGGAATGGGAATAAGTGATTGGTTTGGTGGTGGTAGTAGGATCCTCATAGCAACAGAAAACAGAAATCTCTTTCAGGATTGTCCTGCTGTGATGAATGGTGTTAAGCTTGAGAAACATTGCATACGTGAAGGTGAATTCGGGAAGGAAAAGATTGTGAAGGAGAAGAAGGTAGTGGGATTTGTGAAAGAATTCATCGGTGTAATTAATCAACTGAAGGAAGAAGATTCAAATAGGAGGAATGTTGTTTCAATTAGCGGCATGGGCGGGTCGGGCAAGACTACTCTTGCCCGAATGATCTATGACAGCAATGAGGTGAGGGAGGTATTCCCTTGTCGTGAATGGGTAACTGTTTCCAAACAGTGCATTGAAAAGGAAGTTTACAGAAACTGTGCATATCACTGA 1284 0.4073 MYDVFLNFRGEDTRFLFTDYLYHGLADVKKLQVFRDDPALELGDAIKPTLMEAIKRSRIHIVVMSENYVSSSWCLLELEQMLKYSKNNGNERSMVPVFYHVKPAEVRYQISAKYKEAMEKHEKREGKDKGEAWKSALFTVCDLSGQHIVEERDHYETGVIGKIVEQVSAKLLEIRQQLNRFDSQFGVVESLLNLESCDTVGVVGIYEDPKIGKSYIRVFAFELYYKIKYKFQAAGFLVDVSELLRKTTDDDRLEIFQKELLSDMDVKTMHELKHKKMLLVLEGVDSEEHLELLVGMGISDWFGGGSRILIATENRNLFQDCPAVMNGVKLEKHCIREGEFGKEKIVKEKKVVGFVKEFIGVINQLKEEDSNRRNVVSISGMGGSGKTTLARMIYDSNEVREVFPCREWVTVSKQCIEKEVYRNCAYH 427
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip04g03664 427 SUPERFAMILY Toll/Interleukin receptor TIR domain 1 145 IPR035897 -
Aip04g03664 427 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 182 322 IPR027417 -
Aip04g03664 427 Gene3D - 1 168 IPR035897 -
Aip04g03664 427 ProSiteProfiles TIR domain profile. 1 171 IPR000157 GO:0007165
Aip04g03664 427 SMART till_3 1 143 IPR000157 GO:0007165
Aip04g03664 427 Coils Coil 164 184 - -
Aip04g03664 427 Gene3D - 332 425 IPR027417 -
Aip04g03664 427 Gene3D - 169 327 IPR027417 -
Aip04g03664 427 PANTHER TMV RESISTANCE PROTEIN N-LIKE 2 162 - -
Aip04g03664 427 PANTHER TOLL/INTERLEUKIN-LIKE RECEPTOR-PROTEIN 2 162 - -
Aip04g03664 427 Pfam NB-ARC domain 361 422 IPR002182 GO:0043531
Aip04g03664 427 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 346 423 IPR027417 -
Aip04g03664 427 Pfam TIR domain 2 182 IPR000157 GO:0007165
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip04g03664 Aip-Chr4 131065109 131067737 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip04g03664 51 321 WRKY Transcription Factor Family AT4G12020 26.502 8.69e-14 72.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip04g03664 - - aip:107635602 822.387