Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip04g03649 ATGACTCAGGCTGTGGAGGTTCTAAACCGGTATGGAACGGATCTTGTTGGTGAAGCCAGGGGTTCTGATTCTGAGTGTTTGGCGGGTTTTGAGTGTTTCTTGAACATCGTGAGGGCACTGGGGATGGGGTCATGCATCTCAGAGGCTGGTGGTCACTCTCCTCCCCTTCTTCCAATCCAGCCAGACACCAATATGGATGGTGGGAAGAAGAGGAGGTTGAAGGGTTCCCCTTCCTTTGATTACAAAGTGCCTGGGAGAATGCACCTGAATGGGTCCAGCGATGTTGCATCTATGTACTGCAAGCAAGGTAGAAAAGGGATCAACCAAGATGCTATGCTTGTTTGGGAGAACTTCTGTTCAAAGGAGGACACCATTTTTTGTGGTGTTTTTGATGGTCATGGACCTTATGGCCATAGGGTTGCAAGGAAAGTCAGGGATTCTTTCCCTTTAAAACTTAGCGCTCAATGGGATTTCCACCGCAAGAGTACAGATGGGCTGAGTGATCAGGGCAGTGCCGCAGGAAGTTACAAATCTGAAGAGATTGGGTTTAGACTGGTTGATGAGAAACCTAGATTGACTGATCATGAGCCTGATGGAACAGATACTATCTTGACATTAAAAGAATCCTTTTTGAAGGCTTCTAAGATTATGGATAAGGAACTGAAACTGCATCCTGATATTGATTGCTTTTGCAGCGGGACTACAGCTGTTACCTTGGTTAAGCAGGGCAAGGACCTTGTTATTGGAAATGTTGGGGACTCCAGAGCTATATTGGGTACCCGAGATCATGATGATAATCTTATTGCTGTTCAATTGACAATTGACCTCAAGCCAAATCTTCCCAGGGAAGAAGAGCGAATCAGGCTTCGTAAAGGAAGGGTCTTTCCCCTTCAGAATGAACCGGATGTTGCTCGAGTTTGGCTGCCTAACTCTGATTTCCCTGGTCTTGCTATGGCAAGGGCTTTTGGAGATTTTTGCTTGAAGGACTTTGGACTGATTTCAGTTCCAGATGTGTCATATCATCGCCTTACTGAGAATGATGAATTTGTTGTATTAGCAACAGATGGGATATGGGATGTTTTATCAAATGAAGAGGTTGTGGACATCGTGGCATCTGCTCCACGCCCTTCTGCGGCTCGATCACTGGTGGAGTCAGCTGTTAAAGCATGGAGGATGAAGTTCCCTTTGTGCAAGGTTGATGATTGTGCTGCAGTTTGCCTCTTCGTTGATTCAAATTCGGACTCGGGTTCGGCATCGACCGCAGATGACTCAACACTAGAGCCACCAATTGACCAATCCGAGCAGTCTTCTCTCCTTAGCGAGAAGGGAACTGGCGTGGATGCTGAAAAACAGCAACAATAG 1362 0.4648 MTQAVEVLNRYGTDLVGEARGSDSECLAGFECFLNIVRALGMGSCISEAGGHSPPLLPIQPDTNMDGGKKRRLKGSPSFDYKVPGRMHLNGSSDVASMYCKQGRKGINQDAMLVWENFCSKEDTIFCGVFDGHGPYGHRVARKVRDSFPLKLSAQWDFHRKSTDGLSDQGSAAGSYKSEEIGFRLVDEKPRLTDHEPDGTDTILTLKESFLKASKIMDKELKLHPDIDCFCSGTTAVTLVKQGKDLVIGNVGDSRAILGTRDHDDNLIAVQLTIDLKPNLPREEERIRLRKGRVFPLQNEPDVARVWLPNSDFPGLAMARAFGDFCLKDFGLISVPDVSYHRLTENDEFVVLATDGIWDVLSNEEVVDIVASAPRPSAARSLVESAVKAWRMKFPLCKVDDCAAVCLFVDSNSDSGSASTADDSTLEPPIDQSEQSSLLSEKGTGVDAEKQQQ 453
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip04g03649 453 MobiDBLite consensus disorder prediction 413 453 - -
Aip04g03649 453 CDD PP2Cc 95 409 IPR001932 -
Aip04g03649 453 SUPERFAMILY PP2C-like 91 410 IPR036457 -
Aip04g03649 453 Pfam Protein phosphatase 2C 171 373 IPR001932 -
Aip04g03649 453 PANTHER ALPHABET, ISOFORM E-RELATED 42 415 - -
Aip04g03649 453 SMART PP2C_4 84 407 IPR001932 -
Aip04g03649 453 Gene3D - 92 416 IPR036457 -
Aip04g03649 453 PANTHER PHOSPHATASE 2C FAMILY PROTEIN 42 415 - -
Aip04g03649 453 ProSiteProfiles PPM-type phosphatase domain profile. 95 409 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip04g03649 Aip-Chr4 130976829 130981012 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip04g03649 75 453 PP2C-type Phosphatase Gene Family AT1G16220 56.364 1.32e-148 431
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip04g03649 - - gmx:100802479 759.214