Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip04g03648 ATGGCAGATGGTGTCGTTTCCTTCCTGATTCAGAACTTGTCACAGCTGCTTGTTGATGAAGCGAAGCTGCTGTCCGGTGTGGAGGGAAAAGTCAAGTCCCTCATCAGCGAGCTCAAGTTCATAGACATCTTCCTCAAGAGTTCAGAGGGGAAGCGCAACAACAACATAGTTAAGGAAGTTGTGAACCAGATTAGAGATGTTGCCTATGAAGCTGAAGATGTTGTTGACAACTACGTCGCCAATGTTAGCCTCCACAGAAGCAGAAGCATCCTGGGGAAGATGTTCCATTGTGTTGGCCAAGCTATGATGCTTCATAATGTGGATGCTGAGATTGAGAATATCAAGAGATCCATTTCTGAGATATACAGCAACAGGGACAAGTATGGCATTGGAGAAGGTGAGTTCCAGTGTGGTGGAGAAGCTACCCCAGCTGCCACGGAGGCACTCCGGAAGAGGAGAAGGGATGTGGAGGAAGAAGATGTGGTTGGATTGGTTCATGAGTCTGATACTGTCATTAAGAAACTCTTGAAGACAGATTCACGGCTTCAAATAGCTTCCATAATTGGTATGGGTGGTTTGGGAAAGACTACCCTTGCTAGGAAGATCTACAATAGTAAGAAGGTGAAGGAGAAGTATCCATTTCGTGCATGGGGTTATGTGTCTAATGAGTATAGAGCTAAAGAGTTATTGTTGAGCCTTATTCGGTGTTTGTCAACATGGAAATCTAATGAAGAAAGTGAAGAGGAACTGAAGGAGCATCTAAGAGAGTGCTTGAATGGGAAGAAGTACTTAATTGTGCTTGATGATATTTGGAAAACAGAAGTGTGGGATGATGTAAAAGGAGCTTTTCCAGATGACAATAATGGTAGCAGAATCTTGATAACGAGTCGAATTGGAGAGGTAGCTGCTTATATGGGAACAATGCCTCCTTACTTCCTTCCATTTCTCACTGAAGAACAAAGCTGGGAACTTTTCTCCAAGAAAGTGTTTAGAGGAGAAGAAGATTGTCCACCTGATCTAAAAGATTTAGGCATGTCAATTGTTGAAAGCTGTAGTGGCTTACCTCTTGCTATTGTGGTGCTAGCTGGGCATGTTTCCAAGAAGGAAAAGTCTCTTAGAGAGTGGTCAAGAATCAAAGAACATTGGCTTCGTGTTCGTGACAACAACACTGTGGTGGTGATGGACATACTAAAACTTAGCTATGACAGTTTGCCTCAAAAATTGAAGTCTTGCTTTTTATACTTTGCAATCTATCCTGAAGATTATGAGATCCCTGCAAGAAACCTTATCCAGTTATGGGTAGCTGAAGGTTTTATACAAATTCCAGAAACTGGAACATCAGATACATTAGCACTGGAAGACATTGCAGAGTATTACTTAGAAGAGTTGGTTGATCGTAGTCTGGTGCAAGTGGCAAGCAAGAGGAGCGATGGGGGCGTAAAAACATGTCGAATTCATGATCTTCTTCGCGATCTTTGCGTATCTGAGAGCAAAGCAAGTAAATTCATAGAGATACACAGAGAGTTGGACATCAACAAATCCAACTCTAGAAAGATGTCTTTCCACCACAGCACACAATTCTCATCCTCACCAAACAAAAACAACCACTTTCACACACATTCCTTGTTCCTCTTTGGAGAAGAGCTTACCTGGGATGATGAATCAAAAGGATGTAAACAGTTCAGGAAAAGCTTCAAGTTGGCCCGTGTTCTACACCTCAACAAAGTGTTGTTGGATTTGCCACCTAGTGGCTTGAAGCTGATGATCCATCTAAGGTACTTGAAGATAAAAACAGATTCTAGATCTGCTGAAAATATTTTAGATTCTATATCCAACCTTAGGAATCTAGAAACACTGCATTTAAGTTGTGACTGGGTGGTCTCCATCCCAATCAAGATATGGAAGTTGAAGCGGTTGAGGCATTTCAACTTGAGAATCAAAGAGATTTCTCAGATGTCTAGAGTAACAAACAATGAAAGAATGTCCAACCTTCAAACCCTTTGTGAAGTACCTCTCTATTCAGAAACTATATCAATGCTTAACAACAATGGAAGCTTCCCTAACTTAAAGAAGCTGGGTTTATGTTTCTATCCAAACTTCCAGCAATCTTCTACAGGTGCTGCCAATCTTTCATCACTTAGCATGAACCACCTTAGCAAACTATGCACACTCAAAATAAGAGGTGATCTCTTTAATCCATTCAGTGCAAATGGATTTAAGTCAACGTTTTTTCCATCAAACATTGAGAAGATTACCTTGGTAGACTTCAAGGAATTGGACTTTAAAGCTCTGGGGAAACTCCGGAATCTGAGAATTTTGAAACTGAGAAGAGGATCAACAGGGGATGGTATTCATTGTGTGGCCGGAGAGTTCCCGGCGCTTCAAATGCTTCAGATGAAGGAAGTGAAGGTTGAGAGGTGGATACAAGATGAAGGTGCAATGCCAAGTCTTAGTCGTTTGATCATCAAAGGTGGTGCAGTGGAAGACCTTCCTCTACAACTTCAATCCTTGGCTTCCATTAAATAG 2526 0.4165 MADGVVSFLIQNLSQLLVDEAKLLSGVEGKVKSLISELKFIDIFLKSSEGKRNNNIVKEVVNQIRDVAYEAEDVVDNYVANVSLHRSRSILGKMFHCVGQAMMLHNVDAEIENIKRSISEIYSNRDKYGIGEGEFQCGGEATPAATEALRKRRRDVEEEDVVGLVHESDTVIKKLLKTDSRLQIASIIGMGGLGKTTLARKIYNSKKVKEKYPFRAWGYVSNEYRAKELLLSLIRCLSTWKSNEESEEELKEHLRECLNGKKYLIVLDDIWKTEVWDDVKGAFPDDNNGSRILITSRIGEVAAYMGTMPPYFLPFLTEEQSWELFSKKVFRGEEDCPPDLKDLGMSIVESCSGLPLAIVVLAGHVSKKEKSLREWSRIKEHWLRVRDNNTVVVMDILKLSYDSLPQKLKSCFLYFAIYPEDYEIPARNLIQLWVAEGFIQIPETGTSDTLALEDIAEYYLEELVDRSLVQVASKRSDGGVKTCRIHDLLRDLCVSESKASKFIEIHRELDINKSNSRKMSFHHSTQFSSSPNKNNHFHTHSLFLFGEELTWDDESKGCKQFRKSFKLARVLHLNKVLLDLPPSGLKLMIHLRYLKIKTDSRSAENILDSISNLRNLETLHLSCDWVVSIPIKIWKLKRLRHFNLRIKEISQMSRVTNNERMSNLQTLCEVPLYSETISMLNNNGSFPNLKKLGLCFYPNFQQSSTGAANLSSLSMNHLSKLCTLKIRGDLFNPFSANGFKSTFFPSNIEKITLVDFKELDFKALGKLRNLRILKLRRGSTGDGIHCVAGEFPALQMLQMKEVKVERWIQDEGAMPSLSRLIIKGGAVEDLPLQLQSLASIK 841
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip04g03648 841 Gene3D - 5 122 - -
Aip04g03648 841 PANTHER - 44 823 - -
Aip04g03648 841 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 149 415 IPR027417 -
Aip04g03648 841 PRINTS Disease resistance protein signature 184 199 - -
Aip04g03648 841 PRINTS Disease resistance protein signature 257 271 - -
Aip04g03648 841 PRINTS Disease resistance protein signature 351 365 - -
Aip04g03648 841 PRINTS Disease resistance protein signature 611 627 - -
Aip04g03648 841 PANTHER DISEASE RESISTANCE PROTEIN RP 44 823 IPR044974 GO:0006952
Aip04g03648 841 Pfam NB-ARC domain 169 402 IPR002182 GO:0043531
Aip04g03648 841 Gene3D - 315 405 IPR042197 -
Aip04g03648 841 CDD RX-CC_like 2 121 IPR038005 -
Aip04g03648 841 Pfam Rx N-terminal domain 5 88 IPR041118 -
Aip04g03648 841 Gene3D - 406 495 IPR036388 -
Aip04g03648 841 Gene3D Ribonuclease Inhibitor 535 841 IPR032675 -
Aip04g03648 841 Gene3D - 140 308 IPR027417 -
Aip04g03648 841 SUPERFAMILY L domain-like 485 839 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip04g03648 Aip-Chr4 130972723 130975864 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip04g03648 182 492 WRKY Transcription Factor Family AT5G45050 24.458 2.98e-12 68.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip04g03648 - - adu:107486455 1595.48